RNA–Protein interactions for RNA: ENST00000494658.1

EIF3B-212, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

TSL 2

Gene EIF3B, Length 637 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-212ENST00000494658 PLCH2O75038 1416 aa29.05■■■□□ 2.24
EIF3B-212ENST00000494658 POGZQ7Z3K3 1410 aa29.02■■■□□ 2.24
EIF3B-212ENST00000494658 SCAPERQ9BY12 1400 aa29.01■■■□□ 2.23
EIF3B-212ENST00000494658 FER1L4A9Z1Z3 1794 aa29.01■■■□□ 2.23
EIF3B-212ENST00000494658 PCF11O94913 1555 aaKnown RBP29.01■■■□□ 2.23
EIF3B-212ENST00000494658 CDC42BPBQ9Y5S2 1711 aa28.99■■■□□ 2.23
EIF3B-212ENST00000494658 LMTK3Q96Q04 1460 aa28.97■■■□□ 2.23
EIF3B-212ENST00000494658 TROQ12816 1431 aaPredicted RBP28.95■■■□□ 2.23
EIF3B-212ENST00000494658 MAGI2Q86UL8 1455 aa28.94■■■□□ 2.22
EIF3B-212ENST00000494658 ARHGAP5Q13017 1502 aa28.91■■■□□ 2.22
EIF3B-212ENST00000494658 PREX2Q70Z35 1606 aa28.88■■■□□ 2.21
EIF3B-212ENST00000494658 PLPPR3Q6T4P5 718 aa28.88■■■□□ 2.21
EIF3B-212ENST00000494658 KDM5CP41229 1560 aa28.87■■■□□ 2.21
EIF3B-212ENST00000494658 MLECQ14165 292 aa28.86■■■□□ 2.21
EIF3B-212ENST00000494658 CDC42BPAQ5VT25 1732 aa28.86■■■□□ 2.21
EIF3B-212ENST00000494658 EFCAB2Q5VUJ9 269 aa28.85■■■□□ 2.21
EIF3B-212ENST00000494658 CDK11AQ9UQ88 783 aaPredicted RBP28.85■■■□□ 2.21
EIF3B-212ENST00000494658 CLIP1P30622 1438 aa28.85■■■□□ 2.21
EIF3B-212ENST00000494658 ATP10AO60312 1499 aa28.84■■■□□ 2.21
EIF3B-212ENST00000494658 CASKIN1Q8WXD9 1431 aa28.83■■■□□ 2.21
EIF3B-212ENST00000494658 ARHGEF12Q9NZN5 1544 aa28.83■■■□□ 2.21
EIF3B-212ENST00000494658 ITSN2Q9NZM3 1697 aa28.83■■■□□ 2.21
EIF3B-212ENST00000494658 C9orf84Q5VXU9 1444 aa28.82■■■□□ 2.2
EIF3B-212ENST00000494658 DIP2CQ9Y2E4 1556 aa28.82■■■□□ 2.2
EIF3B-212ENST00000494658 ABCA6Q8N139 1617 aa28.82■■■□□ 2.2
EIF3B-212ENST00000494658 ZNF518AQ6AHZ1 1483 aa28.81■■■□□ 2.2
EIF3B-212ENST00000494658 ABCC1P33527 1531 aa28.79■■■□□ 2.2
EIF3B-212ENST00000494658 CCDC18Q5T9S5 1454 aa28.78■■■□□ 2.2
EIF3B-212ENST00000494658 HSPA2P54652 639 aa28.77■■■□□ 2.2
EIF3B-212ENST00000494658 AFAP1Q8N556 730 aa28.77■■■□□ 2.2
EIF3B-212ENST00000494658 FYCO1Q9BQS8 1478 aa28.73■■■□□ 2.19
EIF3B-212ENST00000494658 PREX1Q8TCU6 1659 aa28.72■■■□□ 2.19
EIF3B-212ENST00000494658 KIDINS220Q9ULH0 1771 aa28.72■■■□□ 2.19
EIF3B-212ENST00000494658 TRAPPC8Q9Y2L5 1435 aa28.71■■■□□ 2.19
EIF3B-212ENST00000494658 REREQ9P2R6 1566 aa28.69■■■□□ 2.18
EIF3B-212ENST00000494658 SAMD9LQ8IVG5 1584 aa28.67■■■□□ 2.18
EIF3B-212ENST00000494658 MLH3Q9UHC1 1453 aa28.66■■■□□ 2.18
EIF3B-212ENST00000494658 C3P01024 1663 aa28.65■■■□□ 2.18
EIF3B-212ENST00000494658 CEBPAP49715 358 aaPredicted RBP28.65■■■□□ 2.18
EIF3B-212ENST00000494658 MYT1LQ9UL68 1186 aa28.63■■■□□ 2.17
EIF3B-212ENST00000494658 FBXO41Q8TF61 875 aa28.62■■■□□ 2.17
EIF3B-212ENST00000494658 SYCP2Q9BX26 1530 aa28.6■■■□□ 2.17
EIF3B-212ENST00000494658 STRCQ7RTU9 1775 aa28.6■■■□□ 2.17
EIF3B-212ENST00000494658 AGLP35573 1532 aa28.57■■■□□ 2.16
EIF3B-212ENST00000494658 GPATCH8Q9UKJ3 1502 aaKnown RBP28.57■■■□□ 2.16
EIF3B-212ENST00000494658 SETD1BQ9UPS6 1966 aaKnown RBP28.57■■■□□ 2.16
EIF3B-212ENST00000494658 SUPT6HQ7KZ85 1726 aaKnown RBP28.55■■■□□ 2.16
EIF3B-212ENST00000494658 ZNF777Q9ULD5 760 aaPredicted RBP28.52■■■□□ 2.16
EIF3B-212ENST00000494658 INO80Q9ULG1 1556 aaPredicted RBP28.49■■■□□ 2.15
EIF3B-212ENST00000494658 TIAM1Q13009 1591 aa28.45■■■□□ 2.15
EIF3B-212ENST00000494658 ATP7AQ04656 1500 aa28.45■■■□□ 2.15
EIF3B-212ENST00000494658 HNRNPMP52272 730 aaKnown RBP eCLIP28.45■■■□□ 2.14
EIF3B-212ENST00000494658 UHRF1BP1Q6BDS2 1440 aa28.44■■■□□ 2.14
EIF3B-212ENST00000494658 MROH2AA6NES4 1674 aa28.43■■■□□ 2.14
EIF3B-212ENST00000494658 CLTCQ00610 1675 aaKnown RBP28.42■■■□□ 2.14
EIF3B-212ENST00000494658 PLXNC1O60486 1568 aa28.41■■■□□ 2.14
EIF3B-212ENST00000494658 MTUS2Q5JR59 1369 aa28.39■■■□□ 2.14
EIF3B-212ENST00000494658 CCNB3Q8WWL7 1395 aa28.39■■■□□ 2.14
EIF3B-212ENST00000494658 EHBP1L1Q8N3D4 1523 aa28.39■■■□□ 2.14
EIF3B-212ENST00000494658 SPAG9O60271 1321 aaKnown RBP28.38■■■□□ 2.13
EIF3B-212ENST00000494658 CEP162Q5TB80 1403 aa28.36■■■□□ 2.13
EIF3B-212ENST00000494658 KIAA1107Q9UPP5 1409 aa28.36■■■□□ 2.13
EIF3B-212ENST00000494658 CFDP1Q9UEE9 299 aaPredicted RBP28.36■■■□□ 2.13
EIF3B-212ENST00000494658 ADGBQ8N7X0 1667 aa28.35■■■□□ 2.13
EIF3B-212ENST00000494658 CERKQ8TCT0 537 aa28.35■■■□□ 2.13
EIF3B-212ENST00000494658 PLEKHH2Q8IVE3 1493 aa28.34■■■□□ 2.13
EIF3B-212ENST00000494658 ZNF644Q9H582 1327 aaPredicted RBP28.34■■■□□ 2.13
EIF3B-212ENST00000494658 CNTLNQ9NXG0 1405 aa28.32■■■□□ 2.12
EIF3B-212ENST00000494658 A2MP01023 1474 aa28.32■■■□□ 2.12
EIF3B-212ENST00000494658 ESF1Q9H501 851 aaKnown RBP28.31■■■□□ 2.12
EIF3B-212ENST00000494658 MBD5Q9P267 1494 aa28.28■■■□□ 2.12
EIF3B-212ENST00000494658 MYO3AQ8NEV4 1616 aa28.27■■■□□ 2.12
EIF3B-212ENST00000494658 ZNF142P52746 1687 aaPredicted RBP28.25■■■□□ 2.11
EIF3B-212ENST00000494658 ZMYM3Q14202 1370 aa28.24■■■□□ 2.11
EIF3B-212ENST00000494658 CAMSAP1Q5T5Y3 1602 aa28.23■■■□□ 2.11
EIF3B-212ENST00000494658 NPATQ14207 1427 aa28.22■■■□□ 2.11
EIF3B-212ENST00000494658 NCOA1Q15788 1441 aa28.22■■■□□ 2.11
EIF3B-212ENST00000494658 NCOA2Q15596 1464 aa28.21■■■□□ 2.11
EIF3B-212ENST00000494658 PTPRTO14522 1441 aa28.2■■■□□ 2.11
EIF3B-212ENST00000494658 CAMSAP2Q08AD1 1489 aa28.18■■■□□ 2.1
EIF3B-212ENST00000494658 LTBP4Q8N2S1 1624 aa28.18■■■□□ 2.1
EIF3B-212ENST00000494658 GGT6Q6P531 493 aa28.17■■■□□ 2.1
EIF3B-212ENST00000494658 DMRT2Q9Y5R5 561 aa28.17■■■□□ 2.1
EIF3B-212ENST00000494658 PTPRKQ15262 1439 aa28.16■■■□□ 2.1
EIF3B-212ENST00000494658 CEP170BQ9Y4F5 1589 aaPredicted RBP28.16■■■□□ 2.1
EIF3B-212ENST00000494658 RTEL1-TNFRSF6BF6WH68 1400 aa28.12■■■□□ 2.09
EIF3B-212ENST00000494658 CCDC141Q6ZP82 1450 aa28.12■■■□□ 2.09
EIF3B-212ENST00000494658 LOC105371045A0A1W2PR82 267 aa28.09■■■□□ 2.09
EIF3B-212ENST00000494658 NCKAP5LQ9HCH0 1330 aa28.07■■■□□ 2.08
EIF3B-212ENST00000494658 ARHGEF5Q12774 1597 aa28.07■■■□□ 2.08
EIF3B-212ENST00000494658 DHX29Q7Z478 1369 aaKnown RBP28.06■■■□□ 2.08
EIF3B-212ENST00000494658 VPS8Q8N3P4 1428 aa28.05■■■□□ 2.08
EIF3B-212ENST00000494658 DNMT1P26358 1616 aaKnown RBP28.04■■■□□ 2.08
EIF3B-212ENST00000494658 LRRC9Q6ZRR7 1453 aa28.04■■■□□ 2.08
EIF3B-212ENST00000494658 PLA2R1Q13018 1463 aa28.02■■■□□ 2.08
EIF3B-212ENST00000494658 POLR1AO95602 1720 aaPredicted RBP28.01■■■□□ 2.07
EIF3B-212ENST00000494658 KDM5DQ9BY66 1539 aa28.01■■■□□ 2.07
EIF3B-212ENST00000494658 TCOF1Q13428 1488 aaKnown RBP28.01■■■□□ 2.07
EIF3B-212ENST00000494658 KIF3BO15066 747 aa27.99■■■□□ 2.07
EIF3B-212ENST00000494658 A2ML1A8K2U0 1454 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms