RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 ATAD2BQ9ULI0 1458 aa5.45□□□□□ -1.54
ATG3-207ENST00000494571 MAMSTRQ6ZN01 415 aa5.45□□□□□ -1.54
ATG3-207ENST00000494571 PABPN1Q86U42 306 aaKnown RBP eCLIP5.45□□□□□ -1.54
ATG3-207ENST00000494571 DCAF11Q8TEB1 546 aa5.45□□□□□ -1.54
ATG3-207ENST00000494571 RRAGDQ9NQL2 400 aaPredicted RBP5.45□□□□□ -1.54
ATG3-207ENST00000494571 CANXP27824 592 aaKnown RBP5.44□□□□□ -1.54
ATG3-207ENST00000494571 PNNQ9H307 717 aaKnown RBP5.44□□□□□ -1.54
ATG3-207ENST00000494571 HNRNPUQ00839 825 aaKnown RBP eCLIP5.44□□□□□ -1.54
ATG3-207ENST00000494571 PRDM2Q13029 1718 aa5.44□□□□□ -1.54
ATG3-207ENST00000494571 DCBLD2Q96PD2 775 aa5.44□□□□□ -1.54
ATG3-207ENST00000494571 ZHX1Q9UKY1 873 aaPredicted RBP5.44□□□□□ -1.54
ATG3-207ENST00000494571 PRKAR2AP13861 404 aaKnown RBP5.43□□□□□ -1.54
ATG3-207ENST00000494571 GTF2E1P29083 439 aaPredicted RBP5.43□□□□□ -1.54
ATG3-207ENST00000494571 CHMP4AQ9BY43 222 aa5.43□□□□□ -1.54
ATG3-207ENST00000494571 SMARCA4P51532 1647 aa5.43□□□□□ -1.54
ATG3-207ENST00000494571 RSF1Q96T23 1441 aaPredicted RBP5.43□□□□□ -1.54
ATG3-207ENST00000494571 VGLL3A8MV65 326 aa5.42□□□□□ -1.54
ATG3-207ENST00000494571 PPM1GO15355 546 aaPredicted RBP5.42□□□□□ -1.54
ATG3-207ENST00000494571 PRDM4Q9UKN5 801 aa5.42□□□□□ -1.54
ATG3-207ENST00000494571 SIN3AQ96ST3 1273 aa5.42□□□□□ -1.54
ATG3-207ENST00000494571 CNGB1Q14028 1251 aaPredicted RBP5.41□□□□□ -1.54
ATG3-207ENST00000494571 SLC4A3P48751 1232 aa5.4□□□□□ -1.54
ATG3-207ENST00000494571 NFKBIBQ15653 356 aa5.4□□□□□ -1.55
ATG3-207ENST00000494571 STAC3Q96MF2 364 aa5.4□□□□□ -1.55
ATG3-207ENST00000494571 HIRIP3Q9BW71 556 aaPredicted RBP5.4□□□□□ -1.55
ATG3-207ENST00000494571 ZFP91Q96JP5 570 aaPredicted RBP5.39□□□□□ -1.55
ATG3-207ENST00000494571 SLC4A1APQ9BWU0 796 aaKnown RBP5.39□□□□□ -1.55
ATG3-207ENST00000494571 PRDM10Q9NQV6 1147 aa5.39□□□□□ -1.55
ATG3-207ENST00000494571 ATF5Q9Y2D1 282 aaPredicted RBP5.39□□□□□ -1.55
ATG3-207ENST00000494571 ANP32CO43423 234 aa5.38□□□□□ -1.55
ATG3-207ENST00000494571 CALD1Q05682 793 aaKnown RBP5.38□□□□□ -1.55
ATG3-207ENST00000494571 IPO4Q8TEX9 1081 aaKnown RBP5.38□□□□□ -1.55
ATG3-207ENST00000494571 CDAN1Q8IWY9 1227 aa5.38□□□□□ -1.55
ATG3-207ENST00000494571 KIF21AQ7Z4S6 1674 aa5.38□□□□□ -1.55
ATG3-207ENST00000494571 ABCC8Q09428 1581 aa5.37□□□□□ -1.55
ATG3-207ENST00000494571 RIMBP3CA6NJZ7 1639 aa5.37□□□□□ -1.55
ATG3-207ENST00000494571 RIMBP3BA6NNM3 1639 aa5.37□□□□□ -1.55
ATG3-207ENST00000494571 RIMBP3Q9UFD9 1639 aa5.37□□□□□ -1.55
ATG3-207ENST00000494571 BRD2P25440 801 aaKnown RBP5.37□□□□□ -1.55
ATG3-207ENST00000494571 ZNF326Q5BKZ1 582 aaKnown RBP5.37□□□□□ -1.55
ATG3-207ENST00000494571 RSPH4AQ5TD94 716 aa5.37□□□□□ -1.55
ATG3-207ENST00000494571 DCAF8L2P0C7V8 631 aa5.37□□□□□ -1.55
ATG3-207ENST00000494571 POLA2Q14181 598 aa5.36□□□□□ -1.55
ATG3-207ENST00000494571 FRAT2O75474 233 aaPredicted RBP5.36□□□□□ -1.55
ATG3-207ENST00000494571 MMRN1Q13201 1228 aa5.35□□□□□ -1.55
ATG3-207ENST00000494571 ZNF830Q96NB3 372 aaPredicted RBP5.35□□□□□ -1.55
ATG3-207ENST00000494571 PDCL3Q9H2J4 239 aa5.35□□□□□ -1.55
ATG3-207ENST00000494571 E9PSI1 815 aa5.34□□□□□ -1.55
ATG3-207ENST00000494571 SECISBP2LQ93073 1101 aaKnown RBP5.34□□□□□ -1.55
ATG3-207ENST00000494571 TULP1O00294 542 aaPredicted RBP5.34□□□□□ -1.55
ATG3-207ENST00000494571 ANP32BQ92688 251 aaKnown RBP5.34□□□□□ -1.55
ATG3-207ENST00000494571 DDRGK1Q96HY6 314 aa5.34□□□□□ -1.55
ATG3-207ENST00000494571 SENP3-EIF4A1A0A087X0R7 540 aa5.33□□□□□ -1.56
ATG3-207ENST00000494571 LCE2DQ5TA82 110 aaPredicted RBP5.33□□□□□ -1.56
ATG3-207ENST00000494571 FAM13BQ9NYF5 915 aa5.33□□□□□ -1.56
ATG3-207ENST00000494571 NESP48681 1621 aa5.33□□□□□ -1.56
ATG3-207ENST00000494571 FTSJ3Q8IY81 847 aaKnown RBP5.33□□□□□ -1.56
ATG3-207ENST00000494571 IFT140Q96RY7 1462 aa5.32□□□□□ -1.56
ATG3-207ENST00000494571 POGKQ9P215 609 aa5.32□□□□□ -1.56
ATG3-207ENST00000494571 CDK11BP21127 795 aaKnown RBP5.32□□□□□ -1.56
ATG3-207ENST00000494571 CADPSQ9ULU8 1353 aa5.31□□□□□ -1.56
ATG3-207ENST00000494571 CLCN1P35523 988 aa5.31□□□□□ -1.56
ATG3-207ENST00000494571 CCER2I3L3R5 266 aa5.3□□□□□ -1.56
ATG3-207ENST00000494571 PDE4AP27815 886 aa5.3□□□□□ -1.56
ATG3-207ENST00000494571 CERS3Q8IU89 383 aa5.3□□□□□ -1.56
ATG3-207ENST00000494571 FAM9BQ8IZU0 186 aa5.3□□□□□ -1.56
ATG3-207ENST00000494571 PANK2Q9BZ23 570 aa5.3□□□□□ -1.56
ATG3-207ENST00000494571 ARHGEF11O15085 1522 aa5.3□□□□□ -1.56
ATG3-207ENST00000494571 CEP164Q9UPV0 1460 aa5.29□□□□□ -1.56
ATG3-207ENST00000494571 AEBP1Q8IUX7 1158 aa5.29□□□□□ -1.56
ATG3-207ENST00000494571 GZF1Q9H116 711 aaPredicted RBP5.29□□□□□ -1.56
ATG3-207ENST00000494571 TMEM51Q9NW97 253 aa5.29□□□□□ -1.56
ATG3-207ENST00000494571 NCLP19338 710 aaKnown RBP5.29□□□□□ -1.56
ATG3-207ENST00000494571 PPP4R3BQ5MIZ7 849 aa5.29□□□□□ -1.56
ATG3-207ENST00000494571 CNPY4Q8N129 248 aa5.29□□□□□ -1.56
ATG3-207ENST00000494571 FAM163AQ96GL9 167 aaPredicted RBP5.29□□□□□ -1.56
ATG3-207ENST00000494571 CFTRP13569 1480 aa5.29□□□□□ -1.56
ATG3-207ENST00000494571 CLASP1Q7Z460 1538 aa5.29□□□□□ -1.56
ATG3-207ENST00000494571 DNTTIP2Q5QJE6 756 aaKnown RBP5.28□□□□□ -1.56
ATG3-207ENST00000494571 KIAA1211Q6ZU35 1233 aa5.28□□□□□ -1.56
ATG3-207ENST00000494571 SPDYE1Q8NFV5 336 aaPredicted RBP5.28□□□□□ -1.56
ATG3-207ENST00000494571 TNNT2P45379 298 aaPredicted RBP5.28□□□□□ -1.56
ATG3-207ENST00000494571 L1TD1Q5T7N2 865 aaKnown RBP5.28□□□□□ -1.56
ATG3-207ENST00000494571 TPM2P07951 284 aa5.27□□□□□ -1.57
ATG3-207ENST00000494571 SKAP1Q86WV1 359 aa5.27□□□□□ -1.57
ATG3-207ENST00000494571 P3H3Q8IVL6 736 aa5.27□□□□□ -1.57
ATG3-207ENST00000494571 CENPJQ9HC77 1338 aaPredicted RBP5.27□□□□□ -1.57
ATG3-207ENST00000494571 SPNS2Q8IVW8 549 aa5.27□□□□□ -1.57
ATG3-207ENST00000494571 POTEB2H3BUK9 544 aa5.27□□□□□ -1.57
ATG3-207ENST00000494571 C14orf37Q86TY3 774 aa5.27□□□□□ -1.57
ATG3-207ENST00000494571 TEX2Q8IWB9 1127 aa5.27□□□□□ -1.57
ATG3-207ENST00000494571 WWC1Q8IX03 1113 aa5.27□□□□□ -1.57
ATG3-207ENST00000494571 PPP1R15AO75807 674 aaPredicted RBP5.26□□□□□ -1.57
ATG3-207ENST00000494571 UBTFP17480 764 aaKnown RBP5.26□□□□□ -1.57
ATG3-207ENST00000494571 SMAP1Q8IYB5 467 aaPredicted RBP5.26□□□□□ -1.57
ATG3-207ENST00000494571 OSCARQ8IYS5 282 aa5.26□□□□□ -1.57
ATG3-207ENST00000494571 ESPNB1AK53 854 aa5.26□□□□□ -1.57
ATG3-207ENST00000494571 XRCC6P12956 609 aaKnown RBP eCLIP5.26□□□□□ -1.57
ATG3-207ENST00000494571 TRIM44Q96DX7 344 aaPredicted RBP5.26□□□□□ -1.57
ATG3-207ENST00000494571 DHX57Q6P158 1386 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms