RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 ZMYM4Q5VZL5 1548 aa15.8■□□□□ 0.12
UFD1-210ENST00000494054 FYCO1Q9BQS8 1478 aa15.8■□□□□ 0.12
UFD1-210ENST00000494054 POGZQ7Z3K3 1410 aa15.8■□□□□ 0.12
UFD1-210ENST00000494054 ADAMTSL3P82987 1691 aa15.79■□□□□ 0.12
UFD1-210ENST00000494054 ARHGAP5Q13017 1502 aa15.78■□□□□ 0.12
UFD1-210ENST00000494054 ZFYVE16Q7Z3T8 1539 aa15.78■□□□□ 0.12
UFD1-210ENST00000494054 MAGI2Q86UL8 1455 aa15.77■□□□□ 0.11
UFD1-210ENST00000494054 BCORL1Q5H9F3 1711 aa15.77■□□□□ 0.11
UFD1-210ENST00000494054 PTPRMP28827 1452 aa15.76■□□□□ 0.11
UFD1-210ENST00000494054 HECW2Q9P2P5 1572 aa15.75■□□□□ 0.11
UFD1-210ENST00000494054 SIGLEC1Q9BZZ2 1709 aa15.75■□□□□ 0.11
UFD1-210ENST00000494054 AFAP1Q8N556 730 aa15.75■□□□□ 0.11
UFD1-210ENST00000494054 CDC42BPBQ9Y5S2 1711 aa15.74■□□□□ 0.11
UFD1-210ENST00000494054 MADDQ8WXG6 1647 aa15.74■□□□□ 0.11
UFD1-210ENST00000494054 CEP162Q5TB80 1403 aa15.73■□□□□ 0.11
UFD1-210ENST00000494054 LOC105371045A0A1W2PR82 267 aa15.72■□□□□ 0.11
UFD1-210ENST00000494054 PREX2Q70Z35 1606 aa15.72■□□□□ 0.11
UFD1-210ENST00000494054 ARHGEF12Q9NZN5 1544 aa15.71■□□□□ 0.11
UFD1-210ENST00000494054 ATP10AO60312 1499 aa15.71■□□□□ 0.1
UFD1-210ENST00000494054 ZNF518AQ6AHZ1 1483 aa15.71■□□□□ 0.1
UFD1-210ENST00000494054 MLECQ14165 292 aa15.7■□□□□ 0.1
UFD1-210ENST00000494054 TRAPPC8Q9Y2L5 1435 aa15.69■□□□□ 0.1
UFD1-210ENST00000494054 CDC42BPAQ5VT25 1732 aa15.69■□□□□ 0.1
UFD1-210ENST00000494054 KDM5CP41229 1560 aa15.69■□□□□ 0.1
UFD1-210ENST00000494054 GPATCH8Q9UKJ3 1502 aaKnown RBP15.68■□□□□ 0.1
UFD1-210ENST00000494054 ABCC1P33527 1531 aa15.68■□□□□ 0.1
UFD1-210ENST00000494054 RIMS1Q86UR5 1692 aaKnown RBP15.67■□□□□ 0.1
UFD1-210ENST00000494054 ZNF777Q9ULD5 760 aaPredicted RBP15.67■□□□□ 0.1
UFD1-210ENST00000494054 C9orf84Q5VXU9 1444 aa15.67■□□□□ 0.1
UFD1-210ENST00000494054 MYT1LQ9UL68 1186 aa15.66■□□□□ 0.1
UFD1-210ENST00000494054 MTUS2Q5JR59 1369 aa15.65■□□□□ 0.1
UFD1-210ENST00000494054 PLPPR3Q6T4P5 718 aa15.65■□□□□ 0.1
UFD1-210ENST00000494054 MLH3Q9UHC1 1453 aa15.65■□□□□ 0.1
UFD1-210ENST00000494054 ITSN2Q9NZM3 1697 aa15.64■□□□□ 0.09
UFD1-210ENST00000494054 SAMD9LQ8IVG5 1584 aa15.63■□□□□ 0.09
UFD1-210ENST00000494054 DIP2CQ9Y2E4 1556 aa15.63■□□□□ 0.09
UFD1-210ENST00000494054 CCNB3Q8WWL7 1395 aa15.62■□□□□ 0.09
UFD1-210ENST00000494054 HNRNPMP52272 730 aaKnown RBP eCLIP15.62■□□□□ 0.09
UFD1-210ENST00000494054 CFDP1Q9UEE9 299 aaPredicted RBP15.62■□□□□ 0.09
UFD1-210ENST00000494054 ABCA6Q8N139 1617 aa15.61■□□□□ 0.09
UFD1-210ENST00000494054 SYCP2Q9BX26 1530 aa15.59■□□□□ 0.09
UFD1-210ENST00000494054 FER1L4A9Z1Z3 1794 aa15.59■□□□□ 0.09
UFD1-210ENST00000494054 KIDINS220Q9ULH0 1771 aa15.59■□□□□ 0.09
UFD1-210ENST00000494054 LMTK3Q96Q04 1460 aa15.59■□□□□ 0.09
UFD1-210ENST00000494054 EHBP1L1Q8N3D4 1523 aa15.58■□□□□ 0.09
UFD1-210ENST00000494054 REREQ9P2R6 1566 aa15.58■□□□□ 0.09
UFD1-210ENST00000494054 ZNF644Q9H582 1327 aaPredicted RBP15.58■□□□□ 0.08
UFD1-210ENST00000494054 KIAA1107Q9UPP5 1409 aa15.58■□□□□ 0.08
UFD1-210ENST00000494054 TIAM1Q13009 1591 aa15.58■□□□□ 0.08
UFD1-210ENST00000494054 CEBPAP49715 358 aaPredicted RBP15.57■□□□□ 0.08
UFD1-210ENST00000494054 SPAG9O60271 1321 aaKnown RBP15.56■□□□□ 0.08
UFD1-210ENST00000494054 PLEKHH2Q8IVE3 1493 aa15.55■□□□□ 0.08
UFD1-210ENST00000494054 VPS8Q8N3P4 1428 aa15.55■□□□□ 0.08
UFD1-210ENST00000494054 AGLP35573 1532 aa15.54■□□□□ 0.08
UFD1-210ENST00000494054 HSPA2P54652 639 aa15.54■□□□□ 0.08
UFD1-210ENST00000494054 NCOA2Q15596 1464 aa15.53■□□□□ 0.08
UFD1-210ENST00000494054 MBD5Q9P267 1494 aa15.52■□□□□ 0.07
UFD1-210ENST00000494054 ATP7AQ04656 1500 aa15.51■□□□□ 0.07
UFD1-210ENST00000494054 INO80Q9ULG1 1556 aaPredicted RBP15.49■□□□□ 0.07
UFD1-210ENST00000494054 SUPT6HQ7KZ85 1726 aaKnown RBP15.49■□□□□ 0.07
UFD1-210ENST00000494054 KANK4Q5T7N3 995 aaPredicted RBP15.49■□□□□ 0.07
UFD1-210ENST00000494054 LRRC9Q6ZRR7 1453 aa15.48■□□□□ 0.07
UFD1-210ENST00000494054 ESF1Q9H501 851 aaKnown RBP15.47■□□□□ 0.07
UFD1-210ENST00000494054 A2MP01023 1474 aa15.46■□□□□ 0.07
UFD1-210ENST00000494054 CAMSAP2Q08AD1 1489 aa15.46■□□□□ 0.06
UFD1-210ENST00000494054 PLXNC1O60486 1568 aa15.45■□□□□ 0.06
UFD1-210ENST00000494054 C3P01024 1663 aa15.44■□□□□ 0.06
UFD1-210ENST00000494054 RTEL1-TNFRSF6BF6WH68 1400 aa15.43■□□□□ 0.06
UFD1-210ENST00000494054 MAP3K1Q13233 1512 aa15.43■□□□□ 0.06
UFD1-210ENST00000494054 PREX1Q8TCU6 1659 aa15.43■□□□□ 0.06
UFD1-210ENST00000494054 CNTLNQ9NXG0 1405 aa15.43■□□□□ 0.06
UFD1-210ENST00000494054 GGT6Q6P531 493 aa15.42■□□□□ 0.06
UFD1-210ENST00000494054 CCDC141Q6ZP82 1450 aa15.41■□□□□ 0.06
UFD1-210ENST00000494054 ZMYM3Q14202 1370 aa15.41■□□□□ 0.06
UFD1-210ENST00000494054 RSPH4AQ5TD94 716 aa15.41■□□□□ 0.06
UFD1-210ENST00000494054 ADGBQ8N7X0 1667 aa15.41■□□□□ 0.06
UFD1-210ENST00000494054 UHRF1BP1Q6BDS2 1440 aa15.4■□□□□ 0.06
UFD1-210ENST00000494054 SETD1BQ9UPS6 1966 aaKnown RBP15.4■□□□□ 0.06
UFD1-210ENST00000494054 DHX29Q7Z478 1369 aaKnown RBP15.39■□□□□ 0.05
UFD1-210ENST00000494054 ARHGEF5Q12774 1597 aa15.38■□□□□ 0.05
UFD1-210ENST00000494054 MROH2AA6NES4 1674 aa15.37■□□□□ 0.05
UFD1-210ENST00000494054 CLTCQ00610 1675 aaKnown RBP15.37■□□□□ 0.05
UFD1-210ENST00000494054 MYOM3Q5VTT5 1437 aa15.36■□□□□ 0.05
UFD1-210ENST00000494054 KIF3BO15066 747 aa15.35■□□□□ 0.05
UFD1-210ENST00000494054 TSPY4P0CV99 314 aa15.35■□□□□ 0.05
UFD1-210ENST00000494054 TSPY10P0CW01 314 aa15.35■□□□□ 0.05
UFD1-210ENST00000494054 PPP6R1Q9UPN7 881 aa15.35■□□□□ 0.05
UFD1-210ENST00000494054 NPATQ14207 1427 aa15.34■□□□□ 0.05
UFD1-210ENST00000494054 MIA2Q96PC5 1412 aa15.34■□□□□ 0.05
UFD1-210ENST00000494054 APLP2Q06481 763 aa15.34■□□□□ 0.05
UFD1-210ENST00000494054 STRCQ7RTU9 1775 aa15.34■□□□□ 0.05
UFD1-210ENST00000494054 PTPRKQ15262 1439 aa15.33■□□□□ 0.04
UFD1-210ENST00000494054 FBXO41Q8TF61 875 aa15.32■□□□□ 0.04
UFD1-210ENST00000494054 MAST1Q9Y2H9 1570 aa15.3■□□□□ 0.04
UFD1-210ENST00000494054 DMRT2Q9Y5R5 561 aa15.29■□□□□ 0.04
UFD1-210ENST00000494054 FBXO31Q5XUX0 539 aaPredicted RBP15.28■□□□□ 0.04
UFD1-210ENST00000494054 WASHC2CQ9Y4E1 1318 aa15.27■□□□□ 0.04
UFD1-210ENST00000494054 CERKQ8TCT0 537 aa15.27■□□□□ 0.04
UFD1-210ENST00000494054 ABCC5O15440 1437 aa15.26■□□□□ 0.03
UFD1-210ENST00000494054 NCOA1Q15788 1441 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms