RNA–Protein interactions for RNA: ENST00000493736.5

SORT1-207, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-207ENST00000493736 TMC2Q8TDI7 906 aa12.32□□□□□ -0.44
SORT1-207ENST00000493736 GTPBP6O43824 516 aaPredicted RBP12.31□□□□□ -0.44
SORT1-207ENST00000493736 C2orf72A6NCS6 295 aa12.3□□□□□ -0.44
SORT1-207ENST00000493736 HOXB3P14651 431 aaPredicted RBP12.3□□□□□ -0.44
SORT1-207ENST00000493736 ZNF710Q8N1W2 664 aa12.3□□□□□ -0.44
SORT1-207ENST00000493736 BBXQ8WY36 941 aaPredicted RBP12.29□□□□□ -0.44
SORT1-207ENST00000493736 RIMBP2O15034 1052 aa12.28□□□□□ -0.44
SORT1-207ENST00000493736 KIF3CO14782 793 aa12.27□□□□□ -0.45
SORT1-207ENST00000493736 MARVELD3Q96A59 401 aa12.24□□□□□ -0.45
SORT1-207ENST00000493736 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.23□□□□□ -0.45
SORT1-207ENST00000493736 EMP3P54852 163 aa12.21□□□□□ -0.45
SORT1-207ENST00000493736 ZSWIM6Q9HCJ5 1215 aa12.19□□□□□ -0.46
SORT1-207ENST00000493736 GPHNQ9NQX3 736 aaPredicted RBP12.19□□□□□ -0.46
SORT1-207ENST00000493736 HOXB1P14653 301 aaPredicted RBP12.18□□□□□ -0.46
SORT1-207ENST00000493736 SPRYD3Q8NCJ5 442 aa12.16□□□□□ -0.46
SORT1-207ENST00000493736 PCDH10Q9P2E7 1040 aa12.16□□□□□ -0.46
SORT1-207ENST00000493736 FOXK1P85037 733 aa12.15□□□□□ -0.46
SORT1-207ENST00000493736 FAM205CA6NFA0 338 aa12.13□□□□□ -0.47
SORT1-207ENST00000493736 PDE4AP27815 886 aa12.13□□□□□ -0.47
SORT1-207ENST00000493736 GPR153Q6NV75 609 aa12.13□□□□□ -0.47
SORT1-207ENST00000493736 PLPP6Q8IY26 295 aa12.13□□□□□ -0.47
SORT1-207ENST00000493736 DSG2Q14126 1118 aa12.12□□□□□ -0.47
SORT1-207ENST00000493736 ARSIQ5FYB1 569 aa12.12□□□□□ -0.47
SORT1-207ENST00000493736 CDAN1Q8IWY9 1227 aa12.12□□□□□ -0.47
SORT1-207ENST00000493736 CRISPLD2Q9H0B8 497 aa12.12□□□□□ -0.47
SORT1-207ENST00000493736 SLC34A2O95436 690 aa12.11□□□□□ -0.47
SORT1-207ENST00000493736 PAXIP1Q6ZW49 1069 aaPredicted RBP12.11□□□□□ -0.47
SORT1-207ENST00000493736 CFAP44Q96MT7 982 aa12.11□□□□□ -0.47
SORT1-207ENST00000493736 ERBB3P21860 1342 aa12.1□□□□□ -0.47
SORT1-207ENST00000493736 HS3ST6Q96QI5 342 aa12.09□□□□□ -0.47
SORT1-207ENST00000493736 NCKAP5LQ9HCH0 1330 aa12.09□□□□□ -0.47
SORT1-207ENST00000493736 PPP1R15BQ5SWA1 713 aa12.07□□□□□ -0.48
SORT1-207ENST00000493736 KHSRPQ92945 711 aaKnown RBP eCLIP12.07□□□□□ -0.481e-12■■□□□ 13.7
SORT1-207ENST00000493736 LARP6Q9BRS8 491 aaKnown RBP12.07□□□□□ -0.48
SORT1-207ENST00000493736 PCDHGA4Q9Y5G9 962 aa12.07□□□□□ -0.48
SORT1-207ENST00000493736 CADPS2Q86UW7 1296 aa12.05□□□□□ -0.48
SORT1-207ENST00000493736 DDX27Q96GQ7 796 aaKnown RBP12.04□□□□□ -0.48
SORT1-207ENST00000493736 NUDT7P0C024 238 aa12.03□□□□□ -0.48
SORT1-207ENST00000493736 POTEB3A0JP26 581 aa12.02□□□□□ -0.49
SORT1-207ENST00000493736 VARS2Q5ST30 1063 aaKnown RBP12.02□□□□□ -0.49
SORT1-207ENST00000493736 POTEBQ6S5H4 581 aa12.02□□□□□ -0.49
SORT1-207ENST00000493736 PTCD2Q8WV60 388 aaKnown RBP12.02□□□□□ -0.49
SORT1-207ENST00000493736 TBC1D12O60347 775 aa12.01□□□□□ -0.49
SORT1-207ENST00000493736 ZNF316A6NFI3 1004 aaPredicted RBP11.99□□□□□ -0.49
SORT1-207ENST00000493736 MFSD10Q14728 455 aa11.99□□□□□ -0.49
SORT1-207ENST00000493736 UPF1Q92900 1129 aaKnown RBP eCLIP11.98□□□□□ -0.49
SORT1-207ENST00000493736 PLSCR2Q9NRY7 297 aa11.97□□□□□ -0.49
SORT1-207ENST00000493736 OXER1Q8TDS5 423 aa11.95□□□□□ -0.5
SORT1-207ENST00000493736 LHX6Q9UPM6 363 aa11.95□□□□□ -0.5
SORT1-207ENST00000493736 ZNF687Q8N1G0 1237 aa11.92□□□□□ -0.5
SORT1-207ENST00000493736 KRTAP3-3Q9BYR6 98 aa11.89□□□□□ -0.51
SORT1-207ENST00000493736 KRTAP3-2Q9BYR7 98 aa11.89□□□□□ -0.51
SORT1-207ENST00000493736 KDM4FA0A1W2PPD8 638 aa11.88□□□□□ -0.51
SORT1-207ENST00000493736 PSDA5PKW4 1024 aaPredicted RBP11.88□□□□□ -0.51
SORT1-207ENST00000493736 MAP3K9P80192 1104 aa11.87□□□□□ -0.51
SORT1-207ENST00000493736 EMILIN3Q9NT22 766 aa11.85□□□□□ -0.51
SORT1-207ENST00000493736 WDR70Q9NW82 654 aa11.85□□□□□ -0.51
SORT1-207ENST00000493736 EVI5O60447 810 aa11.83□□□□□ -0.52
SORT1-207ENST00000493736 CAMK2BQ13554 666 aa11.83□□□□□ -0.52
SORT1-207ENST00000493736 PPP4R3BQ5MIZ7 849 aa11.81□□□□□ -0.52
SORT1-207ENST00000493736 TSHZ2Q9NRE2 1034 aa11.81□□□□□ -0.52
SORT1-207ENST00000493736 SPNS2Q8IVW8 549 aa11.8□□□□□ -0.52
SORT1-207ENST00000493736 PBX2P40425 430 aa11.79□□□□□ -0.52
SORT1-207ENST00000493736 ZNF454Q8N9F8 522 aa11.78□□□□□ -0.52
SORT1-207ENST00000493736 DPYSL4O14531 572 aa11.77□□□□□ -0.53
SORT1-207ENST00000493736 E2F4Q16254 413 aa11.77□□□□□ -0.53
SORT1-207ENST00000493736 ANO8Q9HCE9 1232 aaPredicted RBP11.77□□□□□ -0.53
SORT1-207ENST00000493736 PLCB2Q00722 1185 aa11.76□□□□□ -0.53
SORT1-207ENST00000493736 AXIN2Q9Y2T1 843 aa11.76□□□□□ -0.53
SORT1-207ENST00000493736 ANKRD13DQ6ZTN6 518 aa11.75□□□□□ -0.53
SORT1-207ENST00000493736 LSM11P83369 360 aaKnown RBP eCLIP11.74□□□□□ -0.533e-47■■■■■ 33.9
SORT1-207ENST00000493736 ARHGAP33O14559 1287 aa11.73□□□□□ -0.53
SORT1-207ENST00000493736 POTEEQ6S8J3 1075 aa11.73□□□□□ -0.53
SORT1-207ENST00000493736 JPH4Q96JJ6 628 aa11.73□□□□□ -0.53
SORT1-207ENST00000493736 FOSBP53539 338 aa11.72□□□□□ -0.53
SORT1-207ENST00000493736 KCNH8Q96L42 1107 aa11.72□□□□□ -0.53
SORT1-207ENST00000493736 MMRN1Q13201 1228 aa11.71□□□□□ -0.53
SORT1-207ENST00000493736 PSEN2P49810 448 aa11.68□□□□□ -0.54
SORT1-207ENST00000493736 ZDHHC16Q969W1 377 aa11.68□□□□□ -0.54
SORT1-207ENST00000493736 KCNK17Q96T54 332 aa11.68□□□□□ -0.54
SORT1-207ENST00000493736 BCL2L12Q9HB09 334 aa11.66□□□□□ -0.54
SORT1-207ENST00000493736 SPDYE16A6NNV3 312 aaPredicted RBP11.65□□□□□ -0.54
SORT1-207ENST00000493736 PHF14O94880 888 aa11.65□□□□□ -0.54
SORT1-207ENST00000493736 PDIA6Q15084 440 aa11.65□□□□□ -0.54
SORT1-207ENST00000493736 PTPREP23469 700 aa11.64□□□□□ -0.55
SORT1-207ENST00000493736 PTGER2P43116 358 aa11.64□□□□□ -0.55
SORT1-207ENST00000493736 DMRTA1Q5VZB9 504 aa11.64□□□□□ -0.55
SORT1-207ENST00000493736 PCDHGA10Q9Y5H3 936 aa11.64□□□□□ -0.55
SORT1-207ENST00000493736 HAP1P54257 671 aaPredicted RBP11.63□□□□□ -0.55
SORT1-207ENST00000493736 TYW1BQ6NUM6 668 aa11.63□□□□□ -0.55
SORT1-207ENST00000493736 ADAM33Q9BZ11 813 aa11.63□□□□□ -0.55
SORT1-207ENST00000493736 ARIH1Q9Y4X5 557 aaPredicted RBP11.63□□□□□ -0.55
SORT1-207ENST00000493736 DDX12PQ92771 950 aa11.62□□□□□ -0.55
SORT1-207ENST00000493736 FBXW7Q969H0 707 aa11.62□□□□□ -0.55
SORT1-207ENST00000493736 ADGRD1Q6QNK2 874 aa11.61□□□□□ -0.55
SORT1-207ENST00000493736 EPAS1Q99814 870 aa11.61□□□□□ -0.55
SORT1-207ENST00000493736 MYT1LQ9UL68 1186 aa11.61□□□□□ -0.55
SORT1-207ENST00000493736 TK2O00142 265 aa11.6□□□□□ -0.55
SORT1-207ENST00000493736 RNF166Q96A37 237 aaPredicted RBP11.58□□□□□ -0.56
SORT1-207ENST00000493736 NBR1Q14596 966 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms