RNA–Protein interactions for RNA: ENST00000493338.1

ABCB8-220, Transcript of ATP binding cassette subfamily B member 8, humanhuman

TSL 3

Gene ABCB8, Length 694 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB8-220ENST00000493338 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.31■□□□□ 0.36
ABCB8-220ENST00000493338 ATP1B4Q9UN42 357 aaPredicted RBP17.3■□□□□ 0.36
ABCB8-220ENST00000493338 ZMYM4Q5VZL5 1548 aa17.3■□□□□ 0.36
ABCB8-220ENST00000493338 IQSEC2Q5JU85 1478 aa17.3■□□□□ 0.36
ABCB8-220ENST00000493338 PTPRTO14522 1441 aa17.3■□□□□ 0.36
ABCB8-220ENST00000493338 CLIP1P30622 1438 aa17.3■□□□□ 0.36
ABCB8-220ENST00000493338 DENND4BO75064 1496 aaPredicted RBP17.29■□□□□ 0.36
ABCB8-220ENST00000493338 TTC37Q6PGP7 1564 aa17.28■□□□□ 0.36
ABCB8-220ENST00000493338 CASKIN1Q8WXD9 1431 aa17.28■□□□□ 0.36
ABCB8-220ENST00000493338 FANCAO15360 1455 aa17.26■□□□□ 0.35
ABCB8-220ENST00000493338 MLECQ14165 292 aa17.26■□□□□ 0.35
ABCB8-220ENST00000493338 LTBP4Q8N2S1 1624 aa17.25■□□□□ 0.35
ABCB8-220ENST00000493338 AKNAQ7Z591 1439 aa17.25■□□□□ 0.35
ABCB8-220ENST00000493338 CEBPAP49715 358 aaPredicted RBP17.24■□□□□ 0.35
ABCB8-220ENST00000493338 LRRIQ1Q96JM4 1722 aa17.24■□□□□ 0.35
ABCB8-220ENST00000493338 SIGLEC1Q9BZZ2 1709 aa17.24■□□□□ 0.35
ABCB8-220ENST00000493338 TROQ12816 1431 aaPredicted RBP17.23■□□□□ 0.35
ABCB8-220ENST00000493338 CDK11AQ9UQ88 783 aaPredicted RBP17.23■□□□□ 0.35
ABCB8-220ENST00000493338 MAGI2Q86UL8 1455 aa17.23■□□□□ 0.35
ABCB8-220ENST00000493338 FYCO1Q9BQS8 1478 aa17.23■□□□□ 0.35
ABCB8-220ENST00000493338 STRCQ7RTU9 1775 aa17.23■□□□□ 0.35
ABCB8-220ENST00000493338 ZFYVE16Q7Z3T8 1539 aa17.22■□□□□ 0.35
ABCB8-220ENST00000493338 CCDC18Q5T9S5 1454 aa17.22■□□□□ 0.35
ABCB8-220ENST00000493338 FER1L4A9Z1Z3 1794 aa17.22■□□□□ 0.35
ABCB8-220ENST00000493338 UBAP1LF5GYI3 381 aa17.2■□□□□ 0.34
ABCB8-220ENST00000493338 KIF14Q15058 1648 aa17.2■□□□□ 0.34
ABCB8-220ENST00000493338 PLCH2O75038 1416 aa17.2■□□□□ 0.34
ABCB8-220ENST00000493338 CEP162Q5TB80 1403 aa17.17■□□□□ 0.34
ABCB8-220ENST00000493338 UHRF1BP1Q6BDS2 1440 aa17.16■□□□□ 0.34
ABCB8-220ENST00000493338 PREX1Q8TCU6 1659 aa17.14■□□□□ 0.33
ABCB8-220ENST00000493338 ARHGEF12Q9NZN5 1544 aa17.13■□□□□ 0.33
ABCB8-220ENST00000493338 MYO5CQ9NQX4 1742 aa17.13■□□□□ 0.33
ABCB8-220ENST00000493338 EFCAB2Q5VUJ9 269 aa17.11■□□□□ 0.33
ABCB8-220ENST00000493338 HSPA1LP34931 641 aa17.1■□□□□ 0.33
ABCB8-220ENST00000493338 SCAPERQ9BY12 1400 aa17.1■□□□□ 0.33
ABCB8-220ENST00000493338 LOC105371045A0A1W2PR82 267 aa17.09■□□□□ 0.33
ABCB8-220ENST00000493338 ATP10AO60312 1499 aa17.09■□□□□ 0.33
ABCB8-220ENST00000493338 ARHGAP5Q13017 1502 aa17.09■□□□□ 0.33
ABCB8-220ENST00000493338 C9orf84Q5VXU9 1444 aa17.08■□□□□ 0.32
ABCB8-220ENST00000493338 MED1Q15648 1581 aaPredicted RBP17.07■□□□□ 0.32
ABCB8-220ENST00000493338 SETD1BQ9UPS6 1966 aaKnown RBP17.06■□□□□ 0.32
ABCB8-220ENST00000493338 PREX2Q70Z35 1606 aa17.06■□□□□ 0.32
ABCB8-220ENST00000493338 ZNF335Q9H4Z2 1342 aaPredicted RBP17.05■□□□□ 0.32
ABCB8-220ENST00000493338 NCOA1Q15788 1441 aa17.04■□□□□ 0.32
ABCB8-220ENST00000493338 KDM5CP41229 1560 aa17.04■□□□□ 0.32
ABCB8-220ENST00000493338 PHF23Q9BUL5 403 aaPredicted RBP17.04■□□□□ 0.32
ABCB8-220ENST00000493338 ZNF518AQ6AHZ1 1483 aa17.04■□□□□ 0.32
ABCB8-220ENST00000493338 CDC42BPBQ9Y5S2 1711 aa17.03■□□□□ 0.32
ABCB8-220ENST00000493338 REREQ9P2R6 1566 aa17.02■□□□□ 0.32
ABCB8-220ENST00000493338 MTUS2Q5JR59 1369 aa17.01■□□□□ 0.31
ABCB8-220ENST00000493338 ABCC1P33527 1531 aa17.01■□□□□ 0.31
ABCB8-220ENST00000493338 GPATCH8Q9UKJ3 1502 aaKnown RBP17.01■□□□□ 0.31
ABCB8-220ENST00000493338 CDC42BPAQ5VT25 1732 aa16.99■□□□□ 0.31
ABCB8-220ENST00000493338 TRAPPC8Q9Y2L5 1435 aa16.99■□□□□ 0.31
ABCB8-220ENST00000493338 EHBP1L1Q8N3D4 1523 aa16.99■□□□□ 0.31
ABCB8-220ENST00000493338 DIP2CQ9Y2E4 1556 aa16.98■□□□□ 0.31
ABCB8-220ENST00000493338 VPS8Q8N3P4 1428 aa16.98■□□□□ 0.31
ABCB8-220ENST00000493338 AFAP1Q8N556 730 aa16.97■□□□□ 0.31
ABCB8-220ENST00000493338 C3P01024 1663 aa16.97■□□□□ 0.31
ABCB8-220ENST00000493338 NCKAP5LQ9HCH0 1330 aa16.96■□□□□ 0.31
ABCB8-220ENST00000493338 ITSN2Q9NZM3 1697 aa16.95■□□□□ 0.3
ABCB8-220ENST00000493338 SAMD9LQ8IVG5 1584 aa16.95■□□□□ 0.3
ABCB8-220ENST00000493338 CCNB3Q8WWL7 1395 aa16.95■□□□□ 0.3
ABCB8-220ENST00000493338 PIP4K2BP78356 416 aa16.95■□□□□ 0.3
ABCB8-220ENST00000493338 ABCA6Q8N139 1617 aa16.95■□□□□ 0.3
ABCB8-220ENST00000493338 TOM1O60784 492 aa16.94■□□□□ 0.3
ABCB8-220ENST00000493338 AGLP35573 1532 aa16.94■□□□□ 0.3
ABCB8-220ENST00000493338 MLH3Q9UHC1 1453 aa16.93■□□□□ 0.3
ABCB8-220ENST00000493338 TIAM1Q13009 1591 aa16.93■□□□□ 0.3
ABCB8-220ENST00000493338 SCAF1Q9H7N4 1312 aaKnown RBP16.93■□□□□ 0.3
ABCB8-220ENST00000493338 ZNF777Q9ULD5 760 aaPredicted RBP16.92■□□□□ 0.3
ABCB8-220ENST00000493338 SYCP2Q9BX26 1530 aa16.91■□□□□ 0.3
ABCB8-220ENST00000493338 PKD2Q13563 968 aa16.91■□□□□ 0.3
ABCB8-220ENST00000493338 CFDP1Q9UEE9 299 aaPredicted RBP16.91■□□□□ 0.3
ABCB8-220ENST00000493338 RGS17Q9UGC6 210 aaPredicted RBP16.91■□□□□ 0.3
ABCB8-220ENST00000493338 KIAA1107Q9UPP5 1409 aa16.9■□□□□ 0.3
ABCB8-220ENST00000493338 PLEKHH2Q8IVE3 1493 aa16.89■□□□□ 0.29
ABCB8-220ENST00000493338 NCOA2Q15596 1464 aa16.88■□□□□ 0.29
ABCB8-220ENST00000493338 MROH2AA6NES4 1674 aa16.88■□□□□ 0.29
ABCB8-220ENST00000493338 KIDINS220Q9ULH0 1771 aa16.87■□□□□ 0.29
ABCB8-220ENST00000493338 ESF1Q9H501 851 aaKnown RBP16.87■□□□□ 0.29
ABCB8-220ENST00000493338 MYT1LQ9UL68 1186 aa16.87■□□□□ 0.29
ABCB8-220ENST00000493338 LRRC9Q6ZRR7 1453 aa16.86■□□□□ 0.29
ABCB8-220ENST00000493338 MAP3K1Q13233 1512 aa16.86■□□□□ 0.29
ABCB8-220ENST00000493338 HNRNPMP52272 730 aaKnown RBP eCLIP16.86■□□□□ 0.29
ABCB8-220ENST00000493338 CNTLNQ9NXG0 1405 aa16.86■□□□□ 0.29
ABCB8-220ENST00000493338 CAMSAP1Q5T5Y3 1602 aa16.85■□□□□ 0.29
ABCB8-220ENST00000493338 SUPT6HQ7KZ85 1726 aaKnown RBP16.85■□□□□ 0.29
ABCB8-220ENST00000493338 ZNF644Q9H582 1327 aaPredicted RBP16.84■□□□□ 0.29
ABCB8-220ENST00000493338 SPAG9O60271 1321 aaKnown RBP16.83■□□□□ 0.28
ABCB8-220ENST00000493338 MBD5Q9P267 1494 aa16.82■□□□□ 0.28
ABCB8-220ENST00000493338 PPP6R1Q9UPN7 881 aa16.82■□□□□ 0.28
ABCB8-220ENST00000493338 INO80Q9ULG1 1556 aaPredicted RBP16.81■□□□□ 0.28
ABCB8-220ENST00000493338 ATP7AQ04656 1500 aa16.81■□□□□ 0.28
ABCB8-220ENST00000493338 NPATQ14207 1427 aa16.81■□□□□ 0.28
ABCB8-220ENST00000493338 KANK4Q5T7N3 995 aaPredicted RBP16.81■□□□□ 0.28
ABCB8-220ENST00000493338 CAMSAP2Q08AD1 1489 aa16.79■□□□□ 0.28
ABCB8-220ENST00000493338 PLA2R1Q13018 1463 aa16.79■□□□□ 0.28
ABCB8-220ENST00000493338 TCOF1Q13428 1488 aaKnown RBP16.79■□□□□ 0.28
ABCB8-220ENST00000493338 ZNF142P52746 1687 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms