RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 SPAG9O60271 1321 aaKnown RBP6.91□□□□□ -1.3
FN1-224ENST00000492816 ZNF710Q8N1W2 664 aa6.91□□□□□ -1.3
FN1-224ENST00000492816 CCDC34Q96HJ3 373 aa6.91□□□□□ -1.3
FN1-224ENST00000492816 EIF4G1Q04637 1599 aaKnown RBP6.91□□□□□ -1.3
FN1-224ENST00000492816 CALD1Q05682 793 aaKnown RBP6.91□□□□□ -1.3
FN1-224ENST00000492816 CEP89Q96ST8 783 aa6.9□□□□□ -1.3
FN1-224ENST00000492816 EFCAB2Q5VUJ9 269 aa6.9□□□□□ -1.3
FN1-224ENST00000492816 PPP4R2Q9NY27 417 aa6.9□□□□□ -1.31
FN1-224ENST00000492816 CFAP44Q96MT7 982 aa6.9□□□□□ -1.31
FN1-224ENST00000492816 NACADO15069 1562 aa6.9□□□□□ -1.31
FN1-224ENST00000492816 CHMP3Q9Y3E7 222 aa6.9□□□□□ -1.31
FN1-224ENST00000492816 U2SURPO15042 1029 aaKnown RBP6.89□□□□□ -1.31
FN1-224ENST00000492816 SALL2Q9Y467 1007 aaPredicted RBP6.89□□□□□ -1.31
FN1-224ENST00000492816 PAXIP1Q6ZW49 1069 aaPredicted RBP6.89□□□□□ -1.31
FN1-224ENST00000492816 FBXW7Q969H0 707 aa6.89□□□□□ -1.31
FN1-224ENST00000492816 GPATCH3Q96I76 525 aa6.88□□□□□ -1.31
FN1-224ENST00000492816 RBM33Q96EV2 1170 aaKnown RBP6.88□□□□□ -1.31
FN1-224ENST00000492816 DCAF1Q9Y4B6 1507 aa6.88□□□□□ -1.31
FN1-224ENST00000492816 CCNB3Q8WWL7 1395 aa6.88□□□□□ -1.31
FN1-224ENST00000492816 STK26Q9P289 416 aa6.87□□□□□ -1.31
FN1-224ENST00000492816 MCCP23508 829 aa6.87□□□□□ -1.31
FN1-224ENST00000492816 SYTL4Q96C24 671 aaPredicted RBP6.87□□□□□ -1.31
FN1-224ENST00000492816 ZCCHC6Q5VYS8 1495 aaKnown RBP6.87□□□□□ -1.31
FN1-224ENST00000492816 LOC105371045A0A1W2PR82 267 aa6.86□□□□□ -1.31
FN1-224ENST00000492816 AMPHP49418 695 aa6.86□□□□□ -1.31
FN1-224ENST00000492816 C1orf141Q5JVX7 400 aa6.86□□□□□ -1.31
FN1-224ENST00000492816 DMRT2Q9Y5R5 561 aa6.86□□□□□ -1.31
FN1-224ENST00000492816 R3HCC1Q9Y3T6 440 aaKnown RBP6.86□□□□□ -1.31
FN1-224ENST00000492816 SMC4Q9NTJ3 1288 aa6.86□□□□□ -1.31
FN1-224ENST00000492816 HSP90B1P14625 803 aaKnown RBP6.86□□□□□ -1.31
FN1-224ENST00000492816 BECN1Q14457 450 aa6.86□□□□□ -1.31
FN1-224ENST00000492816 WASHC2CQ9Y4E1 1318 aa6.85□□□□□ -1.31
FN1-224ENST00000492816 CECR2Q9BXF3 1484 aa6.85□□□□□ -1.31
FN1-224ENST00000492816 VPS37DQ86XT2 251 aa6.85□□□□□ -1.31
FN1-224ENST00000492816 RRP7BPQ9NSQ0 103 aa6.85□□□□□ -1.31
FN1-224ENST00000492816 GOLGA6L4A6NEF3 574 aa6.85□□□□□ -1.31
FN1-224ENST00000492816 PIP4K2BP78356 416 aa6.85□□□□□ -1.31
FN1-224ENST00000492816 CCDC43Q96MW1 224 aaKnown RBP6.85□□□□□ -1.31
FN1-224ENST00000492816 KIF27Q86VH2 1401 aa6.85□□□□□ -1.31
FN1-224ENST00000492816 FAM69CQ0P6D2 419 aa6.84□□□□□ -1.31
FN1-224ENST00000492816 FAM9BQ8IZU0 186 aa6.84□□□□□ -1.31
FN1-224ENST00000492816 PSME1Q06323 249 aa6.84□□□□□ -1.31
FN1-224ENST00000492816 NOC3LQ8WTT2 800 aaKnown RBP6.84□□□□□ -1.31
FN1-224ENST00000492816 KIAA1211Q6ZU35 1233 aa6.84□□□□□ -1.31
FN1-224ENST00000492816 TTC5Q8N0Z6 440 aa6.84□□□□□ -1.32
FN1-224ENST00000492816 TMEM87AQ8NBN3 555 aa6.84□□□□□ -1.32
FN1-224ENST00000492816 LRRFIP1Q32MZ4 808 aaKnown RBP6.83□□□□□ -1.32
FN1-224ENST00000492816 RASSF8Q8NHQ8 419 aa6.83□□□□□ -1.32
FN1-224ENST00000492816 STK31Q9BXU1 1019 aa6.83□□□□□ -1.32
FN1-224ENST00000492816 SAFB2Q14151 953 aaKnown RBP eCLIP6.83□□□□□ -1.32
FN1-224ENST00000492816 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.82□□□□□ -1.32
FN1-224ENST00000492816 TERF2IPQ9NYB0 399 aa6.82□□□□□ -1.32
FN1-224ENST00000492816 TMF1P82094 1093 aa6.82□□□□□ -1.32
FN1-224ENST00000492816 WWC1Q8IX03 1113 aa6.82□□□□□ -1.32
FN1-224ENST00000492816 RAD21O60216 631 aa6.82□□□□□ -1.32
FN1-224ENST00000492816 SPDYE4A6NLX3 237 aa6.82□□□□□ -1.32
FN1-224ENST00000492816 CARD11Q9BXL7 1154 aa6.82□□□□□ -1.32
FN1-224ENST00000492816 EIF3AQ14152 1382 aaKnown RBP6.81□□□□□ -1.32
FN1-224ENST00000492816 NUTM2BA6NNL0 878 aaPredicted RBP6.81□□□□□ -1.32
FN1-224ENST00000492816 NUTM2EB1AL46 878 aaPredicted RBP6.81□□□□□ -1.32
FN1-224ENST00000492816 NUTM2DQ5VT03 806 aaPredicted RBP6.81□□□□□ -1.32
FN1-224ENST00000492816 NUTM2AQ8IVF1 878 aaPredicted RBP6.81□□□□□ -1.32
FN1-224ENST00000492816 PAF1Q8N7H5 531 aa6.81□□□□□ -1.32
FN1-224ENST00000492816 HTATSF1O43719 755 aaKnown RBP6.81□□□□□ -1.32
FN1-224ENST00000492816 CEP162Q5TB80 1403 aa6.81□□□□□ -1.32
FN1-224ENST00000492816 HRCP23327 699 aa6.81□□□□□ -1.32
FN1-224ENST00000492816 MORC1Q86VD1 984 aa6.81□□□□□ -1.32
FN1-224ENST00000492816 TNNT2P45379 298 aaPredicted RBP6.81□□□□□ -1.32
FN1-224ENST00000492816 POGZQ7Z3K3 1410 aa6.8□□□□□ -1.32
FN1-224ENST00000492816 PDE3BQ13370 1112 aa6.79□□□□□ -1.32
FN1-224ENST00000492816 LMOD3Q0VAK6 560 aa6.79□□□□□ -1.32
FN1-224ENST00000492816 BEGAINQ9BUH8 593 aa6.79□□□□□ -1.32
FN1-224ENST00000492816 PTMAP06454 111 aaKnown RBP6.79□□□□□ -1.32
FN1-224ENST00000492816 CHMP4CQ96CF2 233 aa6.79□□□□□ -1.32
FN1-224ENST00000492816 TOMM22Q9NS69 142 aa6.79□□□□□ -1.32
FN1-224ENST00000492816 AKAP17AQ02040 695 aaKnown RBP6.78□□□□□ -1.32
FN1-224ENST00000492816 WRNQ14191 1432 aaPredicted RBP eCLIP6.78□□□□□ -1.32
FN1-224ENST00000492816 MRS2Q9HD23 443 aa6.78□□□□□ -1.32
FN1-224ENST00000492816 HNRNPUQ00839 825 aaKnown RBP eCLIP6.78□□□□□ -1.32
FN1-224ENST00000492816 CCDC136Q96JN2 1154 aa6.78□□□□□ -1.32
FN1-224ENST00000492816 RSPH4AQ5TD94 716 aa6.78□□□□□ -1.32
FN1-224ENST00000492816 LTV1Q96GA3 475 aaPredicted RBP6.77□□□□□ -1.32
FN1-224ENST00000492816 NBR1Q14596 966 aa6.77□□□□□ -1.33
FN1-224ENST00000492816 KIF3BO15066 747 aa6.77□□□□□ -1.33
FN1-224ENST00000492816 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.77□□□□□ -1.33
FN1-224ENST00000492816 IPO8O15397 1037 aaKnown RBP6.77□□□□□ -1.33
FN1-224ENST00000492816 TMEM132AQ24JP5 1023 aa6.77□□□□□ -1.33
FN1-224ENST00000492816 PPM1FP49593 454 aaPredicted RBP6.76□□□□□ -1.33
FN1-224ENST00000492816 NEXNQ0ZGT2 675 aa6.76□□□□□ -1.33
FN1-224ENST00000492816 TPM4P67936 248 aa6.76□□□□□ -1.33
FN1-224ENST00000492816 FHAD1B1AJZ9 1412 aa6.76□□□□□ -1.33
FN1-224ENST00000492816 SYNE3Q6ZMZ3 975 aa6.76□□□□□ -1.33
FN1-224ENST00000492816 DHX16O60231 1041 aaKnown RBP6.75□□□□□ -1.33
FN1-224ENST00000492816 MYO15BQ96JP2 1530 aa6.75□□□□□ -1.33
FN1-224ENST00000492816 TEFQ10587 303 aa6.75□□□□□ -1.33
FN1-224ENST00000492816 PROSER2Q86WR7 435 aaPredicted RBP6.75□□□□□ -1.33
FN1-224ENST00000492816 KIF3AQ9Y496 699 aa6.75□□□□□ -1.33
FN1-224ENST00000492816 RAPGEF4Q8WZA2 1011 aa6.75□□□□□ -1.33
FN1-224ENST00000492816 USP35Q9P2H5 1018 aa6.75□□□□□ -1.33
FN1-224ENST00000492816 UACAQ9BZF9 1416 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms