RNA–Protein interactions for RNA: ENST00000491525.5

NECTIN3-210, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-210ENST00000491525 AQRO60306 1485 aaKnown RBP eCLIP13.25□□□□□ -0.29
NECTIN3-210ENST00000491525 WDR97A6NE52 1622 aa13.24□□□□□ -0.29
NECTIN3-210ENST00000491525 PLCG2P16885 1265 aa13.23□□□□□ -0.29
NECTIN3-210ENST00000491525 WRNQ14191 1432 aaPredicted RBP eCLIP13.22□□□□□ -0.29
NECTIN3-210ENST00000491525 BIVM-ERCC5R4GMW8 1640 aa13.22□□□□□ -0.29
NECTIN3-210ENST00000491525 COLQQ9Y215 455 aaPredicted RBP13.22□□□□□ -0.29
NECTIN3-210ENST00000491525 TDRD9Q8NDG6 1382 aaKnown RBP13.21□□□□□ -0.29
NECTIN3-210ENST00000491525 TOP2BQ02880 1626 aa13.21□□□□□ -0.29
NECTIN3-210ENST00000491525 SYNJ1O43426 1573 aa13.21□□□□□ -0.29
NECTIN3-210ENST00000491525 POTEFA5A3E0 1075 aa13.21□□□□□ -0.29
NECTIN3-210ENST00000491525 OTUD5Q96G74 571 aa13.21□□□□□ -0.29
NECTIN3-210ENST00000491525 MKRN3Q13064 507 aaKnown RBP13.2□□□□□ -0.3
NECTIN3-210ENST00000491525 SCUBE2Q9NQ36 999 aa13.2□□□□□ -0.3
NECTIN3-210ENST00000491525 ABCA10Q8WWZ4 1543 aa13.19□□□□□ -0.3
NECTIN3-210ENST00000491525 OCEL1Q9H607 264 aa13.17□□□□□ -0.3
NECTIN3-210ENST00000491525 ABCA5Q8WWZ7 1642 aa13.16□□□□□ -0.3
NECTIN3-210ENST00000491525 GRIN2BQ13224 1484 aa13.16□□□□□ -0.3
NECTIN3-210ENST00000491525 SNAPC4Q5SXM2 1469 aa13.16□□□□□ -0.3
NECTIN3-210ENST00000491525 IRX5P78411 483 aaPredicted RBP13.15□□□□□ -0.3
NECTIN3-210ENST00000491525 POTEJP0CG39 1038 aa13.14□□□□□ -0.31
NECTIN3-210ENST00000491525 MAGI1Q96QZ7 1491 aaPredicted RBP13.14□□□□□ -0.31
NECTIN3-210ENST00000491525 GAPVD1Q14C86 1478 aa13.13□□□□□ -0.31
NECTIN3-210ENST00000491525 RIOK3O14730 519 aaKnown RBP13.13□□□□□ -0.31
NECTIN3-210ENST00000491525 CHD1O14646 1710 aa13.13□□□□□ -0.31
NECTIN3-210ENST00000491525 CABP2Q9NPB3 220 aa13.11□□□□□ -0.31
NECTIN3-210ENST00000491525 TAOK2Q9UL54 1235 aa13.11□□□□□ -0.31
NECTIN3-210ENST00000491525 PBRM1Q86U86 1689 aa13.11□□□□□ -0.31
NECTIN3-210ENST00000491525 SYNJ2O15056 1496 aa13.09□□□□□ -0.31
NECTIN3-210ENST00000491525 VGFO15240 615 aaPredicted RBP13.08□□□□□ -0.32
NECTIN3-210ENST00000491525 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.32
NECTIN3-210ENST00000491525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.08□□□□□ -0.32
NECTIN3-210ENST00000491525 CLASP1Q7Z460 1538 aa13.04□□□□□ -0.32
NECTIN3-210ENST00000491525 ADAMTS12P58397 1594 aa13.04□□□□□ -0.32
NECTIN3-210ENST00000491525 RNF25Q96BH1 459 aaPredicted RBP13.04□□□□□ -0.32
NECTIN3-210ENST00000491525 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
NECTIN3-210ENST00000491525 ERICH3Q5RHP9 1530 aa13.03□□□□□ -0.32
NECTIN3-210ENST00000491525 RIMBP3CA6NJZ7 1639 aa13.02□□□□□ -0.32
NECTIN3-210ENST00000491525 RIMBP3BA6NNM3 1639 aa13.02□□□□□ -0.32
NECTIN3-210ENST00000491525 RIMBP3Q9UFD9 1639 aa13.02□□□□□ -0.32
NECTIN3-210ENST00000491525 CHMP7Q8WUX9 453 aaPredicted RBP13.02□□□□□ -0.33
NECTIN3-210ENST00000491525 L3MBTL3Q96JM7 780 aaPredicted RBP13.01□□□□□ -0.33
NECTIN3-210ENST00000491525 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13□□□□□ -0.33
NECTIN3-210ENST00000491525 PKD2Q13563 968 aa13□□□□□ -0.33
NECTIN3-210ENST00000491525 ZFP91Q96JP5 570 aaPredicted RBP13□□□□□ -0.33
NECTIN3-210ENST00000491525 GRIN2AQ12879 1464 aa12.99□□□□□ -0.33
NECTIN3-210ENST00000491525 FHAD1B1AJZ9 1412 aa12.99□□□□□ -0.33
NECTIN3-210ENST00000491525 PDCD7Q8N8D1 485 aaKnown RBP12.99□□□□□ -0.33
NECTIN3-210ENST00000491525 EFCAB3Q8N7B9 438 aa12.97□□□□□ -0.33
NECTIN3-210ENST00000491525 G3V3G9 751 aa12.96□□□□□ -0.33
NECTIN3-210ENST00000491525 SLAIN1Q8ND83 568 aa12.96□□□□□ -0.33
NECTIN3-210ENST00000491525 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.96□□□□□ -0.33
NECTIN3-210ENST00000491525 NUP160Q12769 1436 aa12.96□□□□□ -0.34
NECTIN3-210ENST00000491525 CEP170Q5SW79 1584 aa12.94□□□□□ -0.34
NECTIN3-210ENST00000491525 ARAP1Q96P48 1450 aa12.94□□□□□ -0.34
NECTIN3-210ENST00000491525 KIF27Q86VH2 1401 aa12.94□□□□□ -0.34
NECTIN3-210ENST00000491525 C3orf67Q6ZVT6 689 aa12.93□□□□□ -0.34
NECTIN3-210ENST00000491525 ILDR1Q86SU0 546 aaPredicted RBP12.93□□□□□ -0.34
NECTIN3-210ENST00000491525 SOX12O15370 315 aa12.92□□□□□ -0.34
NECTIN3-210ENST00000491525 IGF1RP08069 1367 aa12.91□□□□□ -0.34
NECTIN3-210ENST00000491525 RGL2O15211 777 aa12.9□□□□□ -0.34
NECTIN3-210ENST00000491525 BCL11BQ9C0K0 894 aaPredicted RBP12.9□□□□□ -0.34
NECTIN3-210ENST00000491525 STK24Q9Y6E0 443 aa12.9□□□□□ -0.34
NECTIN3-210ENST00000491525 STK25O00506 426 aa12.89□□□□□ -0.35
NECTIN3-210ENST00000491525 DPY19L2Q6NUT2 758 aa12.88□□□□□ -0.35
NECTIN3-210ENST00000491525 FAM163AQ96GL9 167 aaPredicted RBP12.88□□□□□ -0.35
NECTIN3-210ENST00000491525 CUL7Q14999 1698 aa12.88□□□□□ -0.35
NECTIN3-210ENST00000491525 SHROOM2Q13796 1616 aa12.87□□□□□ -0.35
NECTIN3-210ENST00000491525 BOLA1Q9Y3E2 137 aa12.86□□□□□ -0.35
NECTIN3-210ENST00000491525 RUSC2Q8N2Y8 1516 aa12.86□□□□□ -0.35
NECTIN3-210ENST00000491525 CYB5RLQ6IPT4 315 aa12.84□□□□□ -0.35
NECTIN3-210ENST00000491525 ERCC6L2Q5T890 1561 aa12.84□□□□□ -0.35
NECTIN3-210ENST00000491525 CARMIL1Q5VZK9 1371 aa12.81□□□□□ -0.36
NECTIN3-210ENST00000491525 SNPHO15079 494 aa12.81□□□□□ -0.36
NECTIN3-210ENST00000491525 NLRP6P59044 892 aa12.81□□□□□ -0.36
NECTIN3-210ENST00000491525 PHF8Q9UPP1 1060 aa12.8□□□□□ -0.36
NECTIN3-210ENST00000491525 KIAA0586Q9BVV6 1533 aa12.79□□□□□ -0.36
NECTIN3-210ENST00000491525 PRG4Q92954 1404 aaPredicted RBP12.77□□□□□ -0.37
NECTIN3-210ENST00000491525 POTEMA6NI47 508 aa12.76□□□□□ -0.37
NECTIN3-210ENST00000491525 POTEGQ6S5H5 508 aa12.75□□□□□ -0.37
NECTIN3-210ENST00000491525 JPH4Q96JJ6 628 aa12.75□□□□□ -0.37
NECTIN3-210ENST00000491525 RAPGEF2Q9Y4G8 1499 aa12.74□□□□□ -0.37
NECTIN3-210ENST00000491525 TMEM121BQ9BXQ6 578 aaPredicted RBP12.73□□□□□ -0.37
NECTIN3-210ENST00000491525 MS4A4AQ96JQ5 239 aa12.72□□□□□ -0.37
NECTIN3-210ENST00000491525 PRXQ9BXM0 1461 aa12.71□□□□□ -0.38
NECTIN3-210ENST00000491525 IQGAP2Q13576 1575 aa12.7□□□□□ -0.38
NECTIN3-210ENST00000491525 MICALL2Q8IY33 904 aa12.7□□□□□ -0.38
NECTIN3-210ENST00000491525 FBXO22Q8NEZ5 403 aa12.69□□□□□ -0.38
NECTIN3-210ENST00000491525 MFRPQ9BY79 579 aa12.69□□□□□ -0.38
NECTIN3-210ENST00000491525 LCE2DQ5TA82 110 aaPredicted RBP12.68□□□□□ -0.38
NECTIN3-210ENST00000491525 ST18O60284 1047 aa12.67□□□□□ -0.38
NECTIN3-210ENST00000491525 CHGAP10645 457 aaKnown RBP12.66□□□□□ -0.38
NECTIN3-210ENST00000491525 HS6ST3Q8IZP7 471 aa12.66□□□□□ -0.38
NECTIN3-210ENST00000491525 UGGT2Q9NYU1 1516 aa12.65□□□□□ -0.38
NECTIN3-210ENST00000491525 EEA1Q15075 1411 aa12.64□□□□□ -0.39
NECTIN3-210ENST00000491525 DISP1Q96F81 1524 aa12.64□□□□□ -0.39
NECTIN3-210ENST00000491525 PCDH10Q9P2E7 1040 aa12.62□□□□□ -0.39
NECTIN3-210ENST00000491525 CARMIL2Q6F5E8 1435 aa12.62□□□□□ -0.39
NECTIN3-210ENST00000491525 CTTNBP2Q8WZ74 1663 aa12.61□□□□□ -0.39
NECTIN3-210ENST00000491525 ADCY10Q96PN6 1610 aa12.61□□□□□ -0.39
NECTIN3-210ENST00000491525 TNIKQ9UKE5 1360 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms