RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 LRRIQ1Q96JM4 1722 aa13.35□□□□□ -0.27
LSM2-213ENST00000491421 ZFYVE16Q7Z3T8 1539 aa13.34□□□□□ -0.27
LSM2-213ENST00000491421 MYO5CQ9NQX4 1742 aa13.34□□□□□ -0.27
LSM2-213ENST00000491421 YEATS2Q9ULM3 1422 aa13.34□□□□□ -0.27
LSM2-213ENST00000491421 MAGI2Q86UL8 1455 aa13.34□□□□□ -0.27
LSM2-213ENST00000491421 ADAMTSL3P82987 1691 aa13.31□□□□□ -0.28
LSM2-213ENST00000491421 PTPRMP28827 1452 aa13.31□□□□□ -0.28
LSM2-213ENST00000491421 HECW2Q9P2P5 1572 aa13.31□□□□□ -0.28
LSM2-213ENST00000491421 ZNF518AQ6AHZ1 1483 aa13.3□□□□□ -0.28
LSM2-213ENST00000491421 BCORL1Q5H9F3 1711 aa13.3□□□□□ -0.28
LSM2-213ENST00000491421 CEP162Q5TB80 1403 aa13.3□□□□□ -0.28
LSM2-213ENST00000491421 AFAP1Q8N556 730 aa13.28□□□□□ -0.28
LSM2-213ENST00000491421 PREX2Q70Z35 1606 aa13.28□□□□□ -0.28
LSM2-213ENST00000491421 MADDQ8WXG6 1647 aa13.28□□□□□ -0.28
LSM2-213ENST00000491421 ATP10AO60312 1499 aa13.27□□□□□ -0.29
LSM2-213ENST00000491421 C9orf84Q5VXU9 1444 aa13.26□□□□□ -0.29
LSM2-213ENST00000491421 MYT1LQ9UL68 1186 aa13.26□□□□□ -0.29
LSM2-213ENST00000491421 KDM5CP41229 1560 aa13.25□□□□□ -0.29
LSM2-213ENST00000491421 MTUS2Q5JR59 1369 aa13.25□□□□□ -0.29
LSM2-213ENST00000491421 MLECQ14165 292 aa13.25□□□□□ -0.29
LSM2-213ENST00000491421 CDC42BPBQ9Y5S2 1711 aa13.25□□□□□ -0.29
LSM2-213ENST00000491421 ABCC1P33527 1531 aa13.24□□□□□ -0.29
LSM2-213ENST00000491421 ZNF777Q9ULD5 760 aaPredicted RBP13.24□□□□□ -0.29
LSM2-213ENST00000491421 ARHGEF12Q9NZN5 1544 aa13.23□□□□□ -0.29
LSM2-213ENST00000491421 TRAPPC8Q9Y2L5 1435 aa13.23□□□□□ -0.29
LSM2-213ENST00000491421 SIGLEC1Q9BZZ2 1709 aa13.23□□□□□ -0.29
LSM2-213ENST00000491421 GPATCH8Q9UKJ3 1502 aaKnown RBP13.23□□□□□ -0.29
LSM2-213ENST00000491421 CCNB3Q8WWL7 1395 aa13.22□□□□□ -0.29
LSM2-213ENST00000491421 MLH3Q9UHC1 1453 aa13.22□□□□□ -0.29
LSM2-213ENST00000491421 RIMS1Q86UR5 1692 aaKnown RBP13.21□□□□□ -0.29
LSM2-213ENST00000491421 LOC105371045A0A1W2PR82 267 aa13.21□□□□□ -0.29
LSM2-213ENST00000491421 PLPPR3Q6T4P5 718 aa13.21□□□□□ -0.29
LSM2-213ENST00000491421 CDC42BPAQ5VT25 1732 aa13.21□□□□□ -0.3
LSM2-213ENST00000491421 CFDP1Q9UEE9 299 aaPredicted RBP13.2□□□□□ -0.3
LSM2-213ENST00000491421 DIP2CQ9Y2E4 1556 aa13.2□□□□□ -0.3
LSM2-213ENST00000491421 EHBP1L1Q8N3D4 1523 aa13.19□□□□□ -0.3
LSM2-213ENST00000491421 ITSN2Q9NZM3 1697 aa13.19□□□□□ -0.3
LSM2-213ENST00000491421 SAMD9LQ8IVG5 1584 aa13.19□□□□□ -0.3
LSM2-213ENST00000491421 SYCP2Q9BX26 1530 aa13.18□□□□□ -0.3
LSM2-213ENST00000491421 ABCA6Q8N139 1617 aa13.17□□□□□ -0.3
LSM2-213ENST00000491421 PLEKHH2Q8IVE3 1493 aa13.17□□□□□ -0.3
LSM2-213ENST00000491421 REREQ9P2R6 1566 aa13.17□□□□□ -0.3
LSM2-213ENST00000491421 KIAA1107Q9UPP5 1409 aa13.17□□□□□ -0.3
LSM2-213ENST00000491421 HNRNPMP52272 730 aaKnown RBP eCLIP13.17□□□□□ -0.3
LSM2-213ENST00000491421 LMTK3Q96Q04 1460 aa13.16□□□□□ -0.3
LSM2-213ENST00000491421 SPAG9O60271 1321 aaKnown RBP13.16□□□□□ -0.3
LSM2-213ENST00000491421 FER1L4A9Z1Z3 1794 aa13.15□□□□□ -0.3
LSM2-213ENST00000491421 TIAM1Q13009 1591 aa13.15□□□□□ -0.3
LSM2-213ENST00000491421 VPS8Q8N3P4 1428 aa13.14□□□□□ -0.31
LSM2-213ENST00000491421 AGLP35573 1532 aa13.13□□□□□ -0.31
LSM2-213ENST00000491421 ZNF644Q9H582 1327 aaPredicted RBP13.13□□□□□ -0.31
LSM2-213ENST00000491421 KIDINS220Q9ULH0 1771 aa13.12□□□□□ -0.31
LSM2-213ENST00000491421 CEBPAP49715 358 aaPredicted RBP13.12□□□□□ -0.31
LSM2-213ENST00000491421 ESF1Q9H501 851 aaKnown RBP13.12□□□□□ -0.31
LSM2-213ENST00000491421 NCOA2Q15596 1464 aa13.11□□□□□ -0.31
LSM2-213ENST00000491421 HSPA2P54652 639 aa13.11□□□□□ -0.31
LSM2-213ENST00000491421 ATP7AQ04656 1500 aa13.11□□□□□ -0.31
LSM2-213ENST00000491421 INO80Q9ULG1 1556 aaPredicted RBP13.09□□□□□ -0.31
LSM2-213ENST00000491421 SUPT6HQ7KZ85 1726 aaKnown RBP13.08□□□□□ -0.32
LSM2-213ENST00000491421 ILDR1Q86SU0 546 aaPredicted RBP13.08□□□□□ -0.32
LSM2-213ENST00000491421 MBD5Q9P267 1494 aa13.08□□□□□ -0.32
LSM2-213ENST00000491421 CNTLNQ9NXG0 1405 aa13.07□□□□□ -0.32
LSM2-213ENST00000491421 A2MP01023 1474 aa13.07□□□□□ -0.32
LSM2-213ENST00000491421 LRRC9Q6ZRR7 1453 aa13.07□□□□□ -0.32
LSM2-213ENST00000491421 CAMSAP2Q08AD1 1489 aa13.06□□□□□ -0.32
LSM2-213ENST00000491421 UHRF1BP1Q6BDS2 1440 aa13.05□□□□□ -0.32
LSM2-213ENST00000491421 PLXNC1O60486 1568 aa13.05□□□□□ -0.32
LSM2-213ENST00000491421 RTEL1-TNFRSF6BF6WH68 1400 aa13.05□□□□□ -0.32
LSM2-213ENST00000491421 CCDC141Q6ZP82 1450 aa13.04□□□□□ -0.32
LSM2-213ENST00000491421 MAP3K1Q13233 1512 aa13.04□□□□□ -0.32
LSM2-213ENST00000491421 PREX1Q8TCU6 1659 aa13.03□□□□□ -0.32
LSM2-213ENST00000491421 KANK4Q5T7N3 995 aaPredicted RBP13.03□□□□□ -0.32
LSM2-213ENST00000491421 RSPH4AQ5TD94 716 aa13.03□□□□□ -0.32
LSM2-213ENST00000491421 GGT6Q6P531 493 aa13.02□□□□□ -0.33
LSM2-213ENST00000491421 C3P01024 1663 aa13.02□□□□□ -0.33
LSM2-213ENST00000491421 DHX29Q7Z478 1369 aaKnown RBP13.01□□□□□ -0.33
LSM2-213ENST00000491421 ADGBQ8N7X0 1667 aa13□□□□□ -0.33
LSM2-213ENST00000491421 ZMYM3Q14202 1370 aa13□□□□□ -0.33
LSM2-213ENST00000491421 APLP2Q06481 763 aa13□□□□□ -0.33
LSM2-213ENST00000491421 NPATQ14207 1427 aa12.99□□□□□ -0.33
LSM2-213ENST00000491421 TSPY4P0CV99 314 aa12.99□□□□□ -0.33
LSM2-213ENST00000491421 TSPY10P0CW01 314 aa12.99□□□□□ -0.33
LSM2-213ENST00000491421 PPP6R1Q9UPN7 881 aa12.99□□□□□ -0.33
LSM2-213ENST00000491421 ARHGEF5Q12774 1597 aa12.98□□□□□ -0.33
LSM2-213ENST00000491421 MYOM3Q5VTT5 1437 aa12.98□□□□□ -0.33
LSM2-213ENST00000491421 MROH2AA6NES4 1674 aa12.98□□□□□ -0.33
LSM2-213ENST00000491421 MIA2Q96PC5 1412 aa12.97□□□□□ -0.33
LSM2-213ENST00000491421 KIF3BO15066 747 aa12.97□□□□□ -0.33
LSM2-213ENST00000491421 FBXO41Q8TF61 875 aa12.96□□□□□ -0.33
LSM2-213ENST00000491421 DMRT2Q9Y5R5 561 aa12.96□□□□□ -0.33
LSM2-213ENST00000491421 CLTCQ00610 1675 aaKnown RBP12.96□□□□□ -0.34
LSM2-213ENST00000491421 PTPRKQ15262 1439 aa12.94□□□□□ -0.34
LSM2-213ENST00000491421 SETD1BQ9UPS6 1966 aaKnown RBP12.93□□□□□ -0.34
LSM2-213ENST00000491421 WASHC2CQ9Y4E1 1318 aa12.91□□□□□ -0.34
LSM2-213ENST00000491421 MAST1Q9Y2H9 1570 aa12.91□□□□□ -0.34
LSM2-213ENST00000491421 NCOA1Q15788 1441 aa12.91□□□□□ -0.34
LSM2-213ENST00000491421 KDM5DQ9BY66 1539 aa12.91□□□□□ -0.34
LSM2-213ENST00000491421 FAM135AQ9P2D6 1515 aa12.91□□□□□ -0.34
LSM2-213ENST00000491421 STRCQ7RTU9 1775 aa12.9□□□□□ -0.34
LSM2-213ENST00000491421 CERKQ8TCT0 537 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms