RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 MAGI2Q86UL8 1455 aa13.45□□□□□ -0.26
APP-216ENST00000491395 PLPPR3Q6T4P5 718 aa13.45□□□□□ -0.26
APP-216ENST00000491395 KIF14Q15058 1648 aa13.45□□□□□ -0.26
APP-216ENST00000491395 ZMYM4Q5VZL5 1548 aa13.44□□□□□ -0.26
APP-216ENST00000491395 ILDR1Q86SU0 546 aaPredicted RBP13.44□□□□□ -0.26
APP-216ENST00000491395 ZFYVE16Q7Z3T8 1539 aa13.44□□□□□ -0.26
APP-216ENST00000491395 BCORL1Q5H9F3 1711 aa13.42□□□□□ -0.26
APP-216ENST00000491395 MYT1LQ9UL68 1186 aa13.42□□□□□ -0.26
APP-216ENST00000491395 ARHGAP5Q13017 1502 aa13.42□□□□□ -0.26
APP-216ENST00000491395 MADDQ8WXG6 1647 aa13.42□□□□□ -0.26
APP-216ENST00000491395 PCF11O94913 1555 aaKnown RBP13.41□□□□□ -0.26
APP-216ENST00000491395 ATP10AO60312 1499 aa13.41□□□□□ -0.26
APP-216ENST00000491395 CCDC18Q5T9S5 1454 aa13.41□□□□□ -0.26
APP-216ENST00000491395 LRRIQ1Q96JM4 1722 aa13.39□□□□□ -0.27
APP-216ENST00000491395 FYCO1Q9BQS8 1478 aa13.38□□□□□ -0.27
APP-216ENST00000491395 ZNF777Q9ULD5 760 aaPredicted RBP13.38□□□□□ -0.27
APP-216ENST00000491395 MYO5CQ9NQX4 1742 aa13.38□□□□□ -0.27
APP-216ENST00000491395 ZNF518AQ6AHZ1 1483 aa13.37□□□□□ -0.27
APP-216ENST00000491395 C9orf84Q5VXU9 1444 aa13.37□□□□□ -0.27
APP-216ENST00000491395 TRAPPC8Q9Y2L5 1435 aa13.37□□□□□ -0.27
APP-216ENST00000491395 SIGLEC1Q9BZZ2 1709 aa13.36□□□□□ -0.27
APP-216ENST00000491395 ARHGEF12Q9NZN5 1544 aa13.36□□□□□ -0.27
APP-216ENST00000491395 HSPA2P54652 639 aa13.36□□□□□ -0.27
APP-216ENST00000491395 CEBPAP49715 358 aaPredicted RBP13.35□□□□□ -0.27
APP-216ENST00000491395 RIMS1Q86UR5 1692 aaKnown RBP13.34□□□□□ -0.27
APP-216ENST00000491395 LMTK3Q96Q04 1460 aa13.34□□□□□ -0.27
APP-216ENST00000491395 HNRNPMP52272 730 aaKnown RBP eCLIP13.33□□□□□ -0.28
APP-216ENST00000491395 GPATCH8Q9UKJ3 1502 aaKnown RBP13.33□□□□□ -0.28
APP-216ENST00000491395 KDM5CP41229 1560 aa13.32□□□□□ -0.28
APP-216ENST00000491395 MLH3Q9UHC1 1453 aa13.32□□□□□ -0.28
APP-216ENST00000491395 CFDP1Q9UEE9 299 aaPredicted RBP13.32□□□□□ -0.28
APP-216ENST00000491395 CDC42BPBQ9Y5S2 1711 aa13.31□□□□□ -0.28
APP-216ENST00000491395 MTUS2Q5JR59 1369 aa13.31□□□□□ -0.28
APP-216ENST00000491395 ABCC1P33527 1531 aa13.3□□□□□ -0.28
APP-216ENST00000491395 LOC105371045A0A1W2PR82 267 aa13.3□□□□□ -0.28
APP-216ENST00000491395 PREX2Q70Z35 1606 aa13.3□□□□□ -0.28
APP-216ENST00000491395 CCNB3Q8WWL7 1395 aa13.3□□□□□ -0.28
APP-216ENST00000491395 CEP162Q5TB80 1403 aa13.3□□□□□ -0.28
APP-216ENST00000491395 SPAG9O60271 1321 aaKnown RBP13.29□□□□□ -0.28
APP-216ENST00000491395 DIP2CQ9Y2E4 1556 aa13.28□□□□□ -0.28
APP-216ENST00000491395 ZNF644Q9H582 1327 aaPredicted RBP13.27□□□□□ -0.29
APP-216ENST00000491395 ESF1Q9H501 851 aaKnown RBP13.26□□□□□ -0.29
APP-216ENST00000491395 ABCA6Q8N139 1617 aa13.25□□□□□ -0.29
APP-216ENST00000491395 CDC42BPAQ5VT25 1732 aa13.25□□□□□ -0.29
APP-216ENST00000491395 SAMD9LQ8IVG5 1584 aa13.24□□□□□ -0.29
APP-216ENST00000491395 REREQ9P2R6 1566 aa13.24□□□□□ -0.29
APP-216ENST00000491395 KIAA1107Q9UPP5 1409 aa13.24□□□□□ -0.29
APP-216ENST00000491395 FER1L4A9Z1Z3 1794 aa13.24□□□□□ -0.29
APP-216ENST00000491395 ITSN2Q9NZM3 1697 aa13.24□□□□□ -0.29
APP-216ENST00000491395 AGLP35573 1532 aa13.23□□□□□ -0.29
APP-216ENST00000491395 SYCP2Q9BX26 1530 aa13.23□□□□□ -0.29
APP-216ENST00000491395 FBXO41Q8TF61 875 aa13.23□□□□□ -0.29
APP-216ENST00000491395 PLEKHH2Q8IVE3 1493 aa13.23□□□□□ -0.29
APP-216ENST00000491395 KIDINS220Q9ULH0 1771 aa13.21□□□□□ -0.29
APP-216ENST00000491395 EHBP1L1Q8N3D4 1523 aa13.19□□□□□ -0.3
APP-216ENST00000491395 GGT6Q6P531 493 aa13.19□□□□□ -0.3
APP-216ENST00000491395 MBD5Q9P267 1494 aa13.18□□□□□ -0.3
APP-216ENST00000491395 UHRF1BP1Q6BDS2 1440 aa13.18□□□□□ -0.3
APP-216ENST00000491395 A2MP01023 1474 aa13.17□□□□□ -0.3
APP-216ENST00000491395 TIAM1Q13009 1591 aa13.17□□□□□ -0.3
APP-216ENST00000491395 CNTLNQ9NXG0 1405 aa13.17□□□□□ -0.3
APP-216ENST00000491395 ATP7AQ04656 1500 aa13.17□□□□□ -0.3
APP-216ENST00000491395 ZMYM3Q14202 1370 aa13.17□□□□□ -0.3
APP-216ENST00000491395 NCOA2Q15596 1464 aa13.16□□□□□ -0.3
APP-216ENST00000491395 VPS8Q8N3P4 1428 aa13.15□□□□□ -0.3
APP-216ENST00000491395 KANK4Q5T7N3 995 aaPredicted RBP13.15□□□□□ -0.3
APP-216ENST00000491395 CERKQ8TCT0 537 aa13.15□□□□□ -0.3
APP-216ENST00000491395 DMRT2Q9Y5R5 561 aa13.15□□□□□ -0.3
APP-216ENST00000491395 PREX1Q8TCU6 1659 aa13.13□□□□□ -0.31
APP-216ENST00000491395 INO80Q9ULG1 1556 aaPredicted RBP13.13□□□□□ -0.31
APP-216ENST00000491395 RSPH4AQ5TD94 716 aa13.13□□□□□ -0.31
APP-216ENST00000491395 RTEL1-TNFRSF6BF6WH68 1400 aa13.13□□□□□ -0.31
APP-216ENST00000491395 DHX29Q7Z478 1369 aaKnown RBP13.12□□□□□ -0.31
APP-216ENST00000491395 C3P01024 1663 aa13.12□□□□□ -0.31
APP-216ENST00000491395 SETD1BQ9UPS6 1966 aaKnown RBP13.11□□□□□ -0.31
APP-216ENST00000491395 PPP6R1Q9UPN7 881 aa13.11□□□□□ -0.31
APP-216ENST00000491395 PLXNC1O60486 1568 aa13.11□□□□□ -0.31
APP-216ENST00000491395 SUPT6HQ7KZ85 1726 aaKnown RBP13.1□□□□□ -0.31
APP-216ENST00000491395 CAMSAP2Q08AD1 1489 aa13.1□□□□□ -0.31
APP-216ENST00000491395 LRRC9Q6ZRR7 1453 aa13.1□□□□□ -0.31
APP-216ENST00000491395 KIF3BO15066 747 aa13.1□□□□□ -0.31
APP-216ENST00000491395 TSPY4P0CV99 314 aa13.1□□□□□ -0.31
APP-216ENST00000491395 TSPY10P0CW01 314 aa13.1□□□□□ -0.31
APP-216ENST00000491395 NPATQ14207 1427 aa13.1□□□□□ -0.31
APP-216ENST00000491395 CCDC141Q6ZP82 1450 aa13.1□□□□□ -0.31
APP-216ENST00000491395 PTPRKQ15262 1439 aa13.08□□□□□ -0.32
APP-216ENST00000491395 NCKAP5LQ9HCH0 1330 aa13.08□□□□□ -0.32
APP-216ENST00000491395 PTPRTO14522 1441 aa13.07□□□□□ -0.32
APP-216ENST00000491395 FBXO31Q5XUX0 539 aaPredicted RBP13.07□□□□□ -0.32
APP-216ENST00000491395 NCOA1Q15788 1441 aa13.06□□□□□ -0.32
APP-216ENST00000491395 STRCQ7RTU9 1775 aa13.06□□□□□ -0.32
APP-216ENST00000491395 WASHC2CQ9Y4E1 1318 aa13.05□□□□□ -0.32
APP-216ENST00000491395 CLTCQ00610 1675 aaKnown RBP13.04□□□□□ -0.32
APP-216ENST00000491395 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
APP-216ENST00000491395 MROH2AA6NES4 1674 aa13.03□□□□□ -0.32
APP-216ENST00000491395 ADGBQ8N7X0 1667 aa13.03□□□□□ -0.32
APP-216ENST00000491395 APLP2Q06481 763 aa13.03□□□□□ -0.32
APP-216ENST00000491395 MYOM3Q5VTT5 1437 aa13.02□□□□□ -0.33
APP-216ENST00000491395 ARHGEF5Q12774 1597 aa13.02□□□□□ -0.33
APP-216ENST00000491395 CAMSAP1Q5T5Y3 1602 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms