RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.79■■□□□ 1.88
SNAPC3-206ENST00000490969 SUPT6HQ7KZ85 1726 aaKnown RBP26.79■■□□□ 1.88
SNAPC3-206ENST00000490969 ERICH6BQ5W0A0 696 aa26.78■■□□□ 1.88
SNAPC3-206ENST00000490969 ARHGEF11O15085 1522 aa26.76■■□□□ 1.87
SNAPC3-206ENST00000490969 MYT1LQ9UL68 1186 aa26.75■■□□□ 1.87
SNAPC3-206ENST00000490969 MYOM3Q5VTT5 1437 aa26.74■■□□□ 1.87
SNAPC3-206ENST00000490969 SHROOM2Q13796 1616 aa26.73■■□□□ 1.87
SNAPC3-206ENST00000490969 PPP4R2Q9NY27 417 aa26.72■■□□□ 1.87
SNAPC3-206ENST00000490969 ABCA8O94911 1581 aa26.71■■□□□ 1.87
SNAPC3-206ENST00000490969 PTPRGP23470 1445 aa26.71■■□□□ 1.87
SNAPC3-206ENST00000490969 PTPRKQ15262 1439 aa26.68■■□□□ 1.86
SNAPC3-206ENST00000490969 UACAQ9BZF9 1416 aa26.68■■□□□ 1.86
SNAPC3-206ENST00000490969 CLASP1Q7Z460 1538 aa26.68■■□□□ 1.86
SNAPC3-206ENST00000490969 ATP10BO94823 1461 aa26.64■■□□□ 1.86
SNAPC3-206ENST00000490969 KDM5BQ9UGL1 1544 aa26.63■■□□□ 1.85
SNAPC3-206ENST00000490969 HFM1A2PYH4 1435 aa26.62■■□□□ 1.85
SNAPC3-206ENST00000490969 PTPN23Q9H3S7 1636 aa26.62■■□□□ 1.85
SNAPC3-206ENST00000490969 WASHC2AQ641Q2 1341 aa26.59■■□□□ 1.85
SNAPC3-206ENST00000490969 DEKP35659 375 aaKnown RBP26.59■■□□□ 1.85
SNAPC3-206ENST00000490969 KIF14Q15058 1648 aa26.59■■□□□ 1.85
SNAPC3-206ENST00000490969 TROQ12816 1431 aaPredicted RBP26.58■■□□□ 1.85
SNAPC3-206ENST00000490969 ZNF644Q9H582 1327 aaPredicted RBP26.58■■□□□ 1.85
SNAPC3-206ENST00000490969 HSPA5P11021 654 aaKnown RBP26.53■■□□□ 1.84
SNAPC3-206ENST00000490969 B4GALNT3Q6L9W6 998 aa26.53■■□□□ 1.84
SNAPC3-206ENST00000490969 CHIC2Q9UKJ5 165 aa26.52■■□□□ 1.84
SNAPC3-206ENST00000490969 CCDC184Q52MB2 194 aa26.51■■□□□ 1.83
SNAPC3-206ENST00000490969 TCOF1Q13428 1488 aaKnown RBP26.51■■□□□ 1.83
SNAPC3-206ENST00000490969 NAIPQ13075 1403 aa26.5■■□□□ 1.83
SNAPC3-206ENST00000490969 PLEKHD1A6NEE1 506 aa26.5■■□□□ 1.83
SNAPC3-206ENST00000490969 CNTLNQ9NXG0 1405 aa26.5■■□□□ 1.83
SNAPC3-206ENST00000490969 MIA2Q96PC5 1412 aa26.47■■□□□ 1.83
SNAPC3-206ENST00000490969 NOP58Q9Y2X3 529 aaKnown RBP26.46■■□□□ 1.83
SNAPC3-206ENST00000490969 ZBED9Q6R2W3 1325 aa26.45■■□□□ 1.83
SNAPC3-206ENST00000490969 GPATCH8Q9UKJ3 1502 aaKnown RBP26.45■■□□□ 1.82
SNAPC3-206ENST00000490969 RRP7BPQ9NSQ0 103 aa26.44■■□□□ 1.82
SNAPC3-206ENST00000490969 ADCY10Q96PN6 1610 aa26.43■■□□□ 1.82
SNAPC3-206ENST00000490969 EIF4G2P78344 907 aaKnown RBP eCLIP26.43■■□□□ 1.82
SNAPC3-206ENST00000490969 FAM9BQ8IZU0 186 aa26.42■■□□□ 1.82
SNAPC3-206ENST00000490969 PRKRIP1Q9H875 184 aaPredicted RBP26.41■■□□□ 1.82
SNAPC3-206ENST00000490969 ZNF777Q9ULD5 760 aaPredicted RBP26.41■■□□□ 1.82
SNAPC3-206ENST00000490969 CFDP1Q9UEE9 299 aaPredicted RBP26.4■■□□□ 1.82
SNAPC3-206ENST00000490969 ABCC2Q92887 1545 aa26.4■■□□□ 1.82
SNAPC3-206ENST00000490969 ABCC10Q5T3U5 1492 aa26.39■■□□□ 1.82
SNAPC3-206ENST00000490969 OSCARQ8IYS5 282 aa26.38■■□□□ 1.81
SNAPC3-206ENST00000490969 MRS2Q9HD23 443 aa26.38■■□□□ 1.81
SNAPC3-206ENST00000490969 PAK3O75914 559 aaPredicted RBP26.36■■□□□ 1.81
SNAPC3-206ENST00000490969 NBR1Q14596 966 aa26.35■■□□□ 1.81
SNAPC3-206ENST00000490969 CDC42BPAQ5VT25 1732 aa26.35■■□□□ 1.81
SNAPC3-206ENST00000490969 ABCC5O15440 1437 aa26.34■■□□□ 1.81
SNAPC3-206ENST00000490969 NCOA1Q15788 1441 aa26.34■■□□□ 1.81
SNAPC3-206ENST00000490969 CCDC7Q96M83 1385 aa26.33■■□□□ 1.81
SNAPC3-206ENST00000490969 CAMSAP2Q08AD1 1489 aa26.33■■□□□ 1.81
SNAPC3-206ENST00000490969 DAPK1P53355 1430 aa26.33■■□□□ 1.8
SNAPC3-206ENST00000490969 KDM6BO15054 1643 aa26.32■■□□□ 1.8
SNAPC3-206ENST00000490969 C11orf95C9JLR9 678 aaPredicted RBP26.31■■□□□ 1.8
SNAPC3-206ENST00000490969 DENND4BO75064 1496 aaPredicted RBP26.3■■□□□ 1.8
SNAPC3-206ENST00000490969 ITSN2Q9NZM3 1697 aa26.29■■□□□ 1.8
SNAPC3-206ENST00000490969 DNMT1P26358 1616 aaKnown RBP26.28■■□□□ 1.8
SNAPC3-206ENST00000490969 ZCCHC11Q5TAX3 1644 aaKnown RBP26.27■■□□□ 1.8
SNAPC3-206ENST00000490969 GCC2Q8IWJ2 1684 aa26.24■■□□□ 1.79
SNAPC3-206ENST00000490969 UHRF1BP1LA0JNW5 1464 aa26.24■■□□□ 1.79
SNAPC3-206ENST00000490969 TTC37Q6PGP7 1564 aa26.23■■□□□ 1.79
SNAPC3-206ENST00000490969 SMG6Q86US8 1419 aaKnown RBP26.23■■□□□ 1.79
SNAPC3-206ENST00000490969 L3MBTL2Q969R5 705 aa26.22■■□□□ 1.79
SNAPC3-206ENST00000490969 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.21■■□□□ 1.79
SNAPC3-206ENST00000490969 ANP32AP39687 249 aaKnown RBP26.21■■□□□ 1.79
SNAPC3-206ENST00000490969 IPO9Q96P70 1041 aaKnown RBP26.21■■□□□ 1.79
SNAPC3-206ENST00000490969 AKNAQ7Z591 1439 aa26.2■■□□□ 1.79
SNAPC3-206ENST00000490969 CDC42BPBQ9Y5S2 1711 aa26.2■■□□□ 1.79
SNAPC3-206ENST00000490969 HNRNPMP52272 730 aaKnown RBP eCLIP26.19■■□□□ 1.78
SNAPC3-206ENST00000490969 PRKCSHP14314 528 aaPredicted RBP26.17■■□□□ 1.78
SNAPC3-206ENST00000490969 CCDC136Q96JN2 1154 aa26.16■■□□□ 1.78
SNAPC3-206ENST00000490969 RNF123Q5XPI4 1314 aa26.16■■□□□ 1.78
SNAPC3-206ENST00000490969 MPHOSPH9Q99550 1183 aa26.15■■□□□ 1.78
SNAPC3-206ENST00000490969 KIF7Q2M1P5 1343 aa26.15■■□□□ 1.78
SNAPC3-206ENST00000490969 RTL5Q5HYW3 569 aaPredicted RBP26.14■■□□□ 1.78
SNAPC3-206ENST00000490969 POLR1AO95602 1720 aaPredicted RBP26.14■■□□□ 1.78
SNAPC3-206ENST00000490969 NUDCQ9Y266 331 aa26.14■■□□□ 1.77
SNAPC3-206ENST00000490969 ROCK1Q13464 1354 aa26.13■■□□□ 1.77
SNAPC3-206ENST00000490969 PREX2Q70Z35 1606 aa26.13■■□□□ 1.77
SNAPC3-206ENST00000490969 ZBTB47Q9UFB7 747 aaPredicted RBP26.13■■□□□ 1.77
SNAPC3-206ENST00000490969 SAMD9LQ8IVG5 1584 aa26.12■■□□□ 1.77
SNAPC3-206ENST00000490969 NBPF8Q3BBV2 869 aa26.1■■□□□ 1.77
SNAPC3-206ENST00000490969 SPATA31E1Q6ZUB1 1445 aa26.1■■□□□ 1.77
SNAPC3-206ENST00000490969 CROCC2H7BZ55 1655 aa26.09■■□□□ 1.77
SNAPC3-206ENST00000490969 MBD5Q9P267 1494 aa26.09■■□□□ 1.77
SNAPC3-206ENST00000490969 FOXD1Q16676 465 aa26.07■■□□□ 1.76
SNAPC3-206ENST00000490969 ARHGAP5Q13017 1502 aa26.07■■□□□ 1.76
SNAPC3-206ENST00000490969 RPRD2Q5VT52 1461 aaKnown RBP26.05■■□□□ 1.76
SNAPC3-206ENST00000490969 TEX14Q8IWB6 1497 aa26.05■■□□□ 1.76
SNAPC3-206ENST00000490969 MYO5CQ9NQX4 1742 aa26.03■■□□□ 1.76
SNAPC3-206ENST00000490969 C9orf84Q5VXU9 1444 aa26.02■■□□□ 1.76
SNAPC3-206ENST00000490969 SYCP2Q9BX26 1530 aa26.02■■□□□ 1.76
SNAPC3-206ENST00000490969 ANKRD30BQ9BXX2 1392 aa26.01■■□□□ 1.76
SNAPC3-206ENST00000490969 ADGBQ8N7X0 1667 aa26.01■■□□□ 1.75
SNAPC3-206ENST00000490969 ADGRL2O95490 1459 aa26.01■■□□□ 1.75
SNAPC3-206ENST00000490969 DHX29Q7Z478 1369 aaKnown RBP26■■□□□ 1.75
SNAPC3-206ENST00000490969 ARHGEF12Q9NZN5 1544 aa26■■□□□ 1.75
SNAPC3-206ENST00000490969 WDR7Q9Y4E6 1490 aa26■■□□□ 1.75
SNAPC3-206ENST00000490969 PLCH2O75038 1416 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 188.9 ms