RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	KHSRP	Q92945	711 aa	Known RBP eCLIP	8.28	□□□□□ -1.08	8e-7	■■□□□ 12.1
PUM3-204	ENST00000490444	POTEE	Q6S8J3	1075 aa		8.27	□□□□□ -1.09
PUM3-204	ENST00000490444	FKBP8	Q14318	412 aa		8.24	□□□□□ -1.09
PUM3-204	ENST00000490444	IRX2	Q9BZI1	471 aa	Predicted RBP	8.24	□□□□□ -1.09
PUM3-204	ENST00000490444	SOX12	O15370	315 aa		8.23	□□□□□ -1.09
PUM3-204	ENST00000490444	VASP	P50552	380 aa	Predicted RBP	8.23	□□□□□ -1.09
PUM3-204	ENST00000490444	ADGRD1	Q6QNK2	874 aa		8.23	□□□□□ -1.09
PUM3-204	ENST00000490444	AXIN2	Q9Y2T1	843 aa		8.22	□□□□□ -1.09
PUM3-204	ENST00000490444	IFFO2	Q5TF58	517 aa		8.2	□□□□□ -1.1
PUM3-204	ENST00000490444	MS4A4A	Q96JQ5	239 aa		8.2	□□□□□ -1.1
PUM3-204	ENST00000490444	TK2	O00142	265 aa		8.19	□□□□□ -1.1
PUM3-204	ENST00000490444	ARHGAP33	O14559	1287 aa		8.18	□□□□□ -1.1
PUM3-204	ENST00000490444	NUDT7	P0C024	238 aa		8.18	□□□□□ -1.1
PUM3-204	ENST00000490444	LHX6	Q9UPM6	363 aa		8.18	□□□□□ -1.1
PUM3-204	ENST00000490444	HR	O43593	1189 aa		8.17	□□□□□ -1.1
PUM3-204	ENST00000490444	CIZ1	Q9ULV3	898 aa	Predicted RBP	8.17	□□□□□ -1.1
PUM3-204	ENST00000490444	PSD	A5PKW4	1024 aa	Predicted RBP	8.14	□□□□□ -1.11
PUM3-204	ENST00000490444	SLC34A2	O95436	690 aa		8.14	□□□□□ -1.11
PUM3-204	ENST00000490444	SPOCK2	Q92563	424 aa		8.14	□□□□□ -1.11
PUM3-204	ENST00000490444	KCTD12	Q96CX2	325 aa	Known RBP	8.13	□□□□□ -1.11
PUM3-204	ENST00000490444	TRIM41	Q8WV44	630 aa		8.12	□□□□□ -1.11
PUM3-204	ENST00000490444	KIF3C	O14782	793 aa		8.11	□□□□□ -1.11
PUM3-204	ENST00000490444	PHF8	Q9UPP1	1060 aa		8.11	□□□□□ -1.11
PUM3-204	ENST00000490444	PCDHGA4	Q9Y5G9	962 aa		8.11	□□□□□ -1.11
PUM3-204	ENST00000490444		A0A0G2JS52	829 aa		8.1	□□□□□ -1.11
PUM3-204	ENST00000490444	C2orf72	A6NCS6	295 aa		8.06	□□□□□ -1.12
PUM3-204	ENST00000490444	DMRTA1	Q5VZB9	504 aa		8.06	□□□□□ -1.12
PUM3-204	ENST00000490444	STAC3	Q96MF2	364 aa		8.06	□□□□□ -1.12
PUM3-204	ENST00000490444	NLRP6	P59044	892 aa		8.04	□□□□□ -1.12
PUM3-204	ENST00000490444	PSEN2	P49810	448 aa		8.03	□□□□□ -1.12
PUM3-204	ENST00000490444	KDM4F	A0A1W2PPD8	638 aa		8.01	□□□□□ -1.13
PUM3-204	ENST00000490444	PTPN5	P54829	565 aa		8.01	□□□□□ -1.13
PUM3-204	ENST00000490444		Q6ZNB5	142 aa		8.01	□□□□□ -1.13
PUM3-204	ENST00000490444	IFNLR1	Q8IU57	520 aa	Predicted RBP	8.01	□□□□□ -1.13
PUM3-204	ENST00000490444	FBXO22	Q8NEZ5	403 aa		8.01	□□□□□ -1.13
PUM3-204	ENST00000490444	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	8	□□□□□ -1.13
PUM3-204	ENST00000490444	ZFP91	Q96JP5	570 aa	Predicted RBP	8	□□□□□ -1.13
PUM3-204	ENST00000490444	RIOK3	O14730	519 aa	Known RBP	7.99	□□□□□ -1.13
PUM3-204	ENST00000490444	VGF	O15240	615 aa	Predicted RBP	7.98	□□□□□ -1.13
PUM3-204	ENST00000490444	PPP4R3B	Q5MIZ7	849 aa		7.97	□□□□□ -1.13
PUM3-204	ENST00000490444	THSD4	Q6ZMP0	1018 aa		7.96	□□□□□ -1.14
PUM3-204	ENST00000490444	KCNH8	Q96L42	1107 aa		7.95	□□□□□ -1.14
PUM3-204	ENST00000490444	TMC2	Q8TDI7	906 aa		7.94	□□□□□ -1.14
PUM3-204	ENST00000490444	VPS9D1	Q9Y2B5	631 aa		7.94	□□□□□ -1.14
PUM3-204	ENST00000490444	PTCD2	Q8WV60	388 aa	Known RBP	7.93	□□□□□ -1.14
PUM3-204	ENST00000490444	SLC4A5	Q9BY07	1137 aa		7.93	□□□□□ -1.14
PUM3-204	ENST00000490444	RNF25	Q96BH1	459 aa	Predicted RBP	7.92	□□□□□ -1.14
PUM3-204	ENST00000490444	LAPTM4A	Q15012	233 aa		7.91	□□□□□ -1.14
PUM3-204	ENST00000490444	KCNK17	Q96T54	332 aa		7.9	□□□□□ -1.14
PUM3-204	ENST00000490444	BHMG1	C9JSJ3	638 aa	Predicted RBP	7.89	□□□□□ -1.15
PUM3-204	ENST00000490444	MFRP	Q9BY79	579 aa		7.89	□□□□□ -1.15
PUM3-204	ENST00000490444	ITGBL1	O95965	494 aa	Predicted RBP	7.87	□□□□□ -1.15
PUM3-204	ENST00000490444	WNT2B	Q93097	391 aa		7.86	□□□□□ -1.15
PUM3-204	ENST00000490444	GOLGA8CP	A6NN73	597 aa		7.85	□□□□□ -1.15
PUM3-204	ENST00000490444	LCE2B	O14633	110 aa		7.85	□□□□□ -1.15
PUM3-204	ENST00000490444	TRAF7	Q6Q0C0	670 aa		7.85	□□□□□ -1.15
PUM3-204	ENST00000490444	BCL11B	Q9C0K0	894 aa	Predicted RBP	7.84	□□□□□ -1.15
PUM3-204	ENST00000490444	TAOK2	Q9UL54	1235 aa		7.84	□□□□□ -1.15
PUM3-204	ENST00000490444	TBC1D12	O60347	775 aa		7.83	□□□□□ -1.16
PUM3-204	ENST00000490444	MRPL50	Q8N5N7	158 aa	Known RBP	7.82	□□□□□ -1.16
PUM3-204	ENST00000490444	BCL2L12	Q9HB09	334 aa		7.81	□□□□□ -1.16
PUM3-204	ENST00000490444	FOXK1	P85037	733 aa		7.79	□□□□□ -1.16
PUM3-204	ENST00000490444	STK24	Q9Y6E0	443 aa		7.79	□□□□□ -1.16
PUM3-204	ENST00000490444	ZBED2	Q9BTP6	218 aa		7.78	□□□□□ -1.16
PUM3-204	ENST00000490444	NBPF3	Q9H094	633 aa		7.78	□□□□□ -1.16
PUM3-204	ENST00000490444	GFRA3	O60609	400 aa		7.76	□□□□□ -1.17
PUM3-204	ENST00000490444	PLPP6	Q8IY26	295 aa		7.76	□□□□□ -1.17
PUM3-204	ENST00000490444	PTPRE	P23469	700 aa		7.75	□□□□□ -1.17
PUM3-204	ENST00000490444	NYAP1	Q6ZVC0	841 aa		7.75	□□□□□ -1.17
PUM3-204	ENST00000490444	ZNF454	Q8N9F8	522 aa		7.74	□□□□□ -1.17
PUM3-204	ENST00000490444	KCNC4	Q03721	635 aa		7.72	□□□□□ -1.17
PUM3-204	ENST00000490444	NRG2	O14511	850 aa	Predicted RBP	7.71	□□□□□ -1.18
PUM3-204	ENST00000490444	ANKK1	Q8NFD2	765 aa		7.71	□□□□□ -1.18
PUM3-204	ENST00000490444	GPHN	Q9NQX3	736 aa	Predicted RBP	7.71	□□□□□ -1.18
PUM3-204	ENST00000490444	STK25	O00506	426 aa		7.7	□□□□□ -1.18
PUM3-204	ENST00000490444	FOSB	P53539	338 aa		7.7	□□□□□ -1.18
PUM3-204	ENST00000490444	ZNF787	Q6DD87	383 aa		7.7	□□□□□ -1.18
PUM3-204	ENST00000490444	OXER1	Q8TDS5	423 aa		7.68	□□□□□ -1.18
PUM3-204	ENST00000490444	PPP1R37	O75864	691 aa		7.67	□□□□□ -1.18
PUM3-204	ENST00000490444	DSG2	Q14126	1118 aa		7.67	□□□□□ -1.18
PUM3-204	ENST00000490444	ZNF775	Q96BV0	537 aa	Predicted RBP	7.67	□□□□□ -1.18
PUM3-204	ENST00000490444	SOWAHB	A6NEL2	793 aa		7.66	□□□□□ -1.18
PUM3-204	ENST00000490444	RABGEF1	Q9UJ41	708 aa		7.66	□□□□□ -1.18
PUM3-204	ENST00000490444	BCAM	P50895	628 aa		7.64	□□□□□ -1.19
PUM3-204	ENST00000490444	LAPTM4B	Q86VI4	370 aa		7.64	□□□□□ -1.19
PUM3-204	ENST00000490444	JPH4	Q96JJ6	628 aa		7.64	□□□□□ -1.19
PUM3-204	ENST00000490444	ZDHHC16	Q969W1	377 aa		7.62	□□□□□ -1.19
PUM3-204	ENST00000490444	ADAM33	Q9BZ11	813 aa		7.61	□□□□□ -1.19
PUM3-204	ENST00000490444	ANO8	Q9HCE9	1232 aa	Predicted RBP	7.61	□□□□□ -1.19
PUM3-204	ENST00000490444	PRKD2	Q9BZL6	878 aa		7.6	□□□□□ -1.19
PUM3-204	ENST00000490444	WBP1L	Q9NX94	342 aa		7.6	□□□□□ -1.19
PUM3-204	ENST00000490444	PPP1R3G	B7ZBB8	358 aa		7.59	□□□□□ -1.19
PUM3-204	ENST00000490444	UPF1	Q92900	1129 aa	Known RBP eCLIP	7.59	□□□□□ -1.19
PUM3-204	ENST00000490444		V9GY48	417 aa	Predicted RBP	7.59	□□□□□ -1.19
PUM3-204	ENST00000490444	ZFR	Q96KR1	1074 aa	Known RBP	7.58	□□□□□ -1.2
PUM3-204	ENST00000490444	PROX2	Q3B8N5	592 aa		7.55	□□□□□ -1.2
PUM3-204	ENST00000490444	ONECUT3	O60422	494 aa	Predicted RBP	7.54	□□□□□ -1.2
PUM3-204	ENST00000490444	TSR3	Q9UJK0	312 aa	Known RBP	7.54	□□□□□ -1.2
PUM3-204	ENST00000490444	PDZRN3	Q9UPQ7	1066 aa		7.52	□□□□□ -1.21
PUM3-204	ENST00000490444	EVI5	O60447	810 aa		7.51	□□□□□ -1.21

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