RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 DOK7Q18PE1 504 aa9.65□□□□□ -0.86
NF1-213ENST00000489712 TMC2Q8TDI7 906 aa9.64□□□□□ -0.87
NF1-213ENST00000489712 BBXQ8WY36 941 aaPredicted RBP9.64□□□□□ -0.87
NF1-213ENST00000489712 RIMBP2O15034 1052 aa9.63□□□□□ -0.87
NF1-213ENST00000489712 C2orf72A6NCS6 295 aa9.62□□□□□ -0.87
NF1-213ENST00000489712 KIF3CO14782 793 aa9.62□□□□□ -0.87
NF1-213ENST00000489712 HOXB3P14651 431 aaPredicted RBP9.62□□□□□ -0.87
NF1-213ENST00000489712 ZNF710Q8N1W2 664 aa9.62□□□□□ -0.87
NF1-213ENST00000489712 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.58□□□□□ -0.88
NF1-213ENST00000489712 MARVELD3Q96A59 401 aa9.56□□□□□ -0.88
NF1-213ENST00000489712 ZSWIM6Q9HCJ5 1215 aa9.56□□□□□ -0.88
NF1-213ENST00000489712 EMP3P54852 163 aa9.55□□□□□ -0.88
NF1-213ENST00000489712 HOXB1P14653 301 aaPredicted RBP9.54□□□□□ -0.88
NF1-213ENST00000489712 GPHNQ9NQX3 736 aaPredicted RBP9.54□□□□□ -0.88
NF1-213ENST00000489712 FOXK1P85037 733 aa9.52□□□□□ -0.89
NF1-213ENST00000489712 CRISPLD2Q9H0B8 497 aa9.52□□□□□ -0.89
NF1-213ENST00000489712 SPRYD3Q8NCJ5 442 aa9.51□□□□□ -0.89
NF1-213ENST00000489712 PCDH10Q9P2E7 1040 aa9.51□□□□□ -0.89
NF1-213ENST00000489712 SLC34A2O95436 690 aa9.49□□□□□ -0.89
NF1-213ENST00000489712 DSG2Q14126 1118 aa9.49□□□□□ -0.89
NF1-213ENST00000489712 PLPP6Q8IY26 295 aa9.49□□□□□ -0.89
NF1-213ENST00000489712 PDE4AP27815 886 aa9.48□□□□□ -0.89
NF1-213ENST00000489712 GPR153Q6NV75 609 aa9.48□□□□□ -0.89
NF1-213ENST00000489712 NCKAP5LQ9HCH0 1330 aa9.48□□□□□ -0.89
NF1-213ENST00000489712 FAM205CA6NFA0 338 aa9.47□□□□□ -0.89
NF1-213ENST00000489712 PPP1R15BQ5SWA1 713 aa9.47□□□□□ -0.89
NF1-213ENST00000489712 PAXIP1Q6ZW49 1069 aaPredicted RBP9.47□□□□□ -0.89
NF1-213ENST00000489712 ARSIQ5FYB1 569 aa9.46□□□□□ -0.9
NF1-213ENST00000489712 CFAP44Q96MT7 982 aa9.46□□□□□ -0.9
NF1-213ENST00000489712 HS3ST6Q96QI5 342 aa9.46□□□□□ -0.9
NF1-213ENST00000489712 CDAN1Q8IWY9 1227 aa9.45□□□□□ -0.9
NF1-213ENST00000489712 DDX27Q96GQ7 796 aaKnown RBP9.44□□□□□ -0.9
NF1-213ENST00000489712 PCDHGA4Q9Y5G9 962 aa9.44□□□□□ -0.9
NF1-213ENST00000489712 ERBB3P21860 1342 aa9.44□□□□□ -0.9
NF1-213ENST00000489712 CADPS2Q86UW7 1296 aa9.43□□□□□ -0.9
NF1-213ENST00000489712 LARP6Q9BRS8 491 aaKnown RBP9.43□□□□□ -0.9
NF1-213ENST00000489712 NUDT7P0C024 238 aa9.41□□□□□ -0.9
NF1-213ENST00000489712 MFSD10Q14728 455 aa9.41□□□□□ -0.9
NF1-213ENST00000489712 PTCD2Q8WV60 388 aaKnown RBP9.41□□□□□ -0.9
NF1-213ENST00000489712 KHSRPQ92945 711 aaKnown RBP eCLIP9.41□□□□□ -0.91e-8■■■■□ 24.2
NF1-213ENST00000489712 VARS2Q5ST30 1063 aaKnown RBP9.4□□□□□ -0.9
NF1-213ENST00000489712 POTEB3A0JP26 581 aa9.38□□□□□ -0.91
NF1-213ENST00000489712 ZNF316A6NFI3 1004 aaPredicted RBP9.38□□□□□ -0.91
NF1-213ENST00000489712 TBC1D12O60347 775 aa9.38□□□□□ -0.91
NF1-213ENST00000489712 POTEBQ6S5H4 581 aa9.38□□□□□ -0.91
NF1-213ENST00000489712 OXER1Q8TDS5 423 aa9.37□□□□□ -0.91
NF1-213ENST00000489712 UPF1Q92900 1129 aaKnown RBP eCLIP9.37□□□□□ -0.91
NF1-213ENST00000489712 LHX6Q9UPM6 363 aa9.34□□□□□ -0.91
NF1-213ENST00000489712 PSDA5PKW4 1024 aaPredicted RBP9.33□□□□□ -0.92
NF1-213ENST00000489712 ZNF687Q8N1G0 1237 aa9.32□□□□□ -0.92
NF1-213ENST00000489712 KRTAP3-3Q9BYR6 98 aa9.31□□□□□ -0.92
NF1-213ENST00000489712 KRTAP3-2Q9BYR7 98 aa9.31□□□□□ -0.92
NF1-213ENST00000489712 PLSCR2Q9NRY7 297 aa9.31□□□□□ -0.92
NF1-213ENST00000489712 KDM4FA0A1W2PPD8 638 aa9.3□□□□□ -0.92
NF1-213ENST00000489712 EMILIN3Q9NT22 766 aa9.28□□□□□ -0.92
NF1-213ENST00000489712 PBX2P40425 430 aa9.27□□□□□ -0.93
NF1-213ENST00000489712 MAP3K9P80192 1104 aa9.27□□□□□ -0.93
NF1-213ENST00000489712 CAMK2BQ13554 666 aa9.27□□□□□ -0.93
NF1-213ENST00000489712 WDR70Q9NW82 654 aa9.26□□□□□ -0.93
NF1-213ENST00000489712 EVI5O60447 810 aa9.25□□□□□ -0.93
NF1-213ENST00000489712 PLCB2Q00722 1185 aa9.25□□□□□ -0.93
NF1-213ENST00000489712 PPP4R3BQ5MIZ7 849 aa9.25□□□□□ -0.93
NF1-213ENST00000489712 TSHZ2Q9NRE2 1034 aa9.23□□□□□ -0.93
NF1-213ENST00000489712 DPYSL4O14531 572 aa9.22□□□□□ -0.93
NF1-213ENST00000489712 ZNF454Q8N9F8 522 aa9.22□□□□□ -0.93
NF1-213ENST00000489712 E2F4Q16254 413 aa9.21□□□□□ -0.94
NF1-213ENST00000489712 SPNS2Q8IVW8 549 aa9.21□□□□□ -0.94
NF1-213ENST00000489712 JPH4Q96JJ6 628 aa9.21□□□□□ -0.94
NF1-213ENST00000489712 ANO8Q9HCE9 1232 aaPredicted RBP9.2□□□□□ -0.94
NF1-213ENST00000489712 FOSBP53539 338 aa9.19□□□□□ -0.94
NF1-213ENST00000489712 LSM11P83369 360 aaKnown RBP eCLIP9.19□□□□□ -0.94
NF1-213ENST00000489712 ARHGAP33O14559 1287 aa9.18□□□□□ -0.94
NF1-213ENST00000489712 KCNH8Q96L42 1107 aa9.18□□□□□ -0.94
NF1-213ENST00000489712 AXIN2Q9Y2T1 843 aa9.17□□□□□ -0.94
NF1-213ENST00000489712 PDIA6Q15084 440 aa9.16□□□□□ -0.94
NF1-213ENST00000489712 POTEEQ6S8J3 1075 aa9.16□□□□□ -0.94
NF1-213ENST00000489712 MMRN1Q13201 1228 aa9.15□□□□□ -0.94
NF1-213ENST00000489712 ANKRD13DQ6ZTN6 518 aa9.15□□□□□ -0.94
NF1-213ENST00000489712 BCL2L12Q9HB09 334 aa9.15□□□□□ -0.94
NF1-213ENST00000489712 PTGER2P43116 358 aa9.14□□□□□ -0.95
NF1-213ENST00000489712 ZDHHC16Q969W1 377 aa9.14□□□□□ -0.95
NF1-213ENST00000489712 KCNK17Q96T54 332 aa9.14□□□□□ -0.95
NF1-213ENST00000489712 ARIH1Q9Y4X5 557 aaPredicted RBP9.14□□□□□ -0.95
NF1-213ENST00000489712 SPDYE16A6NNV3 312 aaPredicted RBP9.13□□□□□ -0.95
NF1-213ENST00000489712 PHF14O94880 888 aa9.12□□□□□ -0.95
NF1-213ENST00000489712 PSEN2P49810 448 aa9.12□□□□□ -0.95
NF1-213ENST00000489712 TYW1BQ6NUM6 668 aa9.12□□□□□ -0.95
NF1-213ENST00000489712 FBXW7Q969H0 707 aa9.12□□□□□ -0.95
NF1-213ENST00000489712 PTPREP23469 700 aa9.11□□□□□ -0.95
NF1-213ENST00000489712 HAP1P54257 671 aaPredicted RBP9.11□□□□□ -0.95
NF1-213ENST00000489712 ADAM33Q9BZ11 813 aa9.11□□□□□ -0.95
NF1-213ENST00000489712 PCDHGA10Q9Y5H3 936 aa9.11□□□□□ -0.95
NF1-213ENST00000489712 EPAS1Q99814 870 aa9.1□□□□□ -0.95
NF1-213ENST00000489712 TK2O00142 265 aa9.09□□□□□ -0.95
NF1-213ENST00000489712 DMRTA1Q5VZB9 504 aa9.09□□□□□ -0.95
NF1-213ENST00000489712 ADGRD1Q6QNK2 874 aa9.09□□□□□ -0.95
NF1-213ENST00000489712 DDX12PQ92771 950 aa9.09□□□□□ -0.95
NF1-213ENST00000489712 P3H3Q8IVL6 736 aa9.08□□□□□ -0.96
NF1-213ENST00000489712 MYT1LQ9UL68 1186 aa9.08□□□□□ -0.96
NF1-213ENST00000489712 KCNV2Q8TDN2 545 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms