RNA–Protein interactions for RNA: ENST00000489178.1

ALCAM-208, Transcript of activated leukocyte cell adhesion molecule, humanhuman

TSL 2

Gene ALCAM, Length 783 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-208ENST00000489178 CADPS2Q86UW7 1296 aa13.64□□□□□ -0.23
ALCAM-208ENST00000489178 KIF3CO14782 793 aa13.63□□□□□ -0.23
ALCAM-208ENST00000489178 TSHZ2Q9NRE2 1034 aa13.62□□□□□ -0.23
ALCAM-208ENST00000489178 CRISPLD2Q9H0B8 497 aa13.6□□□□□ -0.23
ALCAM-208ENST00000489178 NCKAP5LQ9HCH0 1330 aa13.58□□□□□ -0.24
ALCAM-208ENST00000489178 GPHNQ9NQX3 736 aaPredicted RBP13.57□□□□□ -0.24
ALCAM-208ENST00000489178 SLAIN1Q8ND83 568 aa13.55□□□□□ -0.24
ALCAM-208ENST00000489178 C2orf72A6NCS6 295 aa13.54□□□□□ -0.24
ALCAM-208ENST00000489178 PDE4AP27815 886 aa13.53□□□□□ -0.24
ALCAM-208ENST00000489178 MFSD10Q14728 455 aa13.51□□□□□ -0.25
ALCAM-208ENST00000489178 FOXK1P85037 733 aa13.5□□□□□ -0.25
ALCAM-208ENST00000489178 TMC2Q8TDI7 906 aa13.5□□□□□ -0.25
ALCAM-208ENST00000489178 HAP1P54257 671 aaPredicted RBP13.49□□□□□ -0.25
ALCAM-208ENST00000489178 DSG2Q14126 1118 aa13.45□□□□□ -0.26
ALCAM-208ENST00000489178 LARP6Q9BRS8 491 aaKnown RBP13.45□□□□□ -0.26
ALCAM-208ENST00000489178 DDX27Q96GQ7 796 aaKnown RBP13.42□□□□□ -0.26
ALCAM-208ENST00000489178 PPP1R15BQ5SWA1 713 aa13.41□□□□□ -0.26
ALCAM-208ENST00000489178 HOXB3P14651 431 aaPredicted RBP13.4□□□□□ -0.26
ALCAM-208ENST00000489178 PLPP6Q8IY26 295 aa13.4□□□□□ -0.26
ALCAM-208ENST00000489178 KDM2AQ9Y2K7 1162 aa13.4□□□□□ -0.26
ALCAM-208ENST00000489178 VSIG10Q8N0Z9 540 aa13.39□□□□□ -0.27
ALCAM-208ENST00000489178 SLC34A2O95436 690 aa13.37□□□□□ -0.27
ALCAM-208ENST00000489178 CAMK2BQ13554 666 aa13.37□□□□□ -0.27
ALCAM-208ENST00000489178 SNPHO15079 494 aa13.35□□□□□ -0.27
ALCAM-208ENST00000489178 DOK7Q18PE1 504 aa13.31□□□□□ -0.28
ALCAM-208ENST00000489178 PTCD2Q8WV60 388 aaKnown RBP13.3□□□□□ -0.28
ALCAM-208ENST00000489178 WDR70Q9NW82 654 aa13.3□□□□□ -0.28
ALCAM-208ENST00000489178 ZSWIM6Q9HCJ5 1215 aa13.28□□□□□ -0.28
ALCAM-208ENST00000489178 EMILIN3Q9NT22 766 aa13.28□□□□□ -0.28
ALCAM-208ENST00000489178 E2F4Q16254 413 aa13.27□□□□□ -0.29
ALCAM-208ENST00000489178 OXER1Q8TDS5 423 aa13.27□□□□□ -0.29
ALCAM-208ENST00000489178 LCE2DQ5TA82 110 aaPredicted RBP13.26□□□□□ -0.29
ALCAM-208ENST00000489178 ARIH1Q9Y4X5 557 aaPredicted RBP13.26□□□□□ -0.29
ALCAM-208ENST00000489178 GPR153Q6NV75 609 aa13.25□□□□□ -0.29
ALCAM-208ENST00000489178 KDM4FA0A1W2PPD8 638 aa13.22□□□□□ -0.29
ALCAM-208ENST00000489178 ST18O60284 1047 aa13.22□□□□□ -0.29
ALCAM-208ENST00000489178 PCDHGA4Q9Y5G9 962 aa13.22□□□□□ -0.29
ALCAM-208ENST00000489178 RIMBP2O15034 1052 aa13.21□□□□□ -0.29
ALCAM-208ENST00000489178 HOXB1P14653 301 aaPredicted RBP13.2□□□□□ -0.3
ALCAM-208ENST00000489178 ZNF710Q8N1W2 664 aa13.19□□□□□ -0.3
ALCAM-208ENST00000489178 FAM163AQ96GL9 167 aaPredicted RBP13.19□□□□□ -0.3
ALCAM-208ENST00000489178 KCNV2Q8TDN2 545 aa13.18□□□□□ -0.3
ALCAM-208ENST00000489178 ARSIQ5FYB1 569 aa13.17□□□□□ -0.3
ALCAM-208ENST00000489178 TBC1D12O60347 775 aa13.15□□□□□ -0.3
ALCAM-208ENST00000489178 ARHGEF1Q92888 912 aaKnown RBP13.15□□□□□ -0.3
ALCAM-208ENST00000489178 UPF1Q92900 1129 aaKnown RBP eCLIP13.15□□□□□ -0.3
ALCAM-208ENST00000489178 P3H3Q8IVL6 736 aa13.14□□□□□ -0.31
ALCAM-208ENST00000489178 KHSRPQ92945 711 aaKnown RBP eCLIP13.13□□□□□ -0.316e-6■■□□□ 12
ALCAM-208ENST00000489178 ANO8Q9HCE9 1232 aaPredicted RBP13.13□□□□□ -0.31
ALCAM-208ENST00000489178 DPYSL4O14531 572 aa13.12□□□□□ -0.31
ALCAM-208ENST00000489178 MAP3K9P80192 1104 aa13.11□□□□□ -0.31
ALCAM-208ENST00000489178 NUDT7P0C024 238 aa13.08□□□□□ -0.32
ALCAM-208ENST00000489178 PDIA6Q15084 440 aa13.08□□□□□ -0.32
ALCAM-208ENST00000489178 EVI5O60447 810 aa13.07□□□□□ -0.32
ALCAM-208ENST00000489178 SPDYE16A6NNV3 312 aaPredicted RBP13.06□□□□□ -0.32
ALCAM-208ENST00000489178 PTGER2P43116 358 aa13.03□□□□□ -0.32
ALCAM-208ENST00000489178 MARVELD3Q96A59 401 aa13.03□□□□□ -0.32
ALCAM-208ENST00000489178 ZNF316A6NFI3 1004 aaPredicted RBP13.02□□□□□ -0.33
ALCAM-208ENST00000489178 LHX6Q9UPM6 363 aa13.01□□□□□ -0.33
ALCAM-208ENST00000489178 EMP3P54852 163 aa12.99□□□□□ -0.33
ALCAM-208ENST00000489178 POTEB3A0JP26 581 aa12.98□□□□□ -0.33
ALCAM-208ENST00000489178 POTEBQ6S5H4 581 aa12.98□□□□□ -0.33
ALCAM-208ENST00000489178 FOSBP53539 338 aa12.95□□□□□ -0.34
ALCAM-208ENST00000489178 ERBB3P21860 1342 aa12.94□□□□□ -0.34
ALCAM-208ENST00000489178 PSDA5PKW4 1024 aaPredicted RBP12.94□□□□□ -0.34
ALCAM-208ENST00000489178 FAM205CA6NFA0 338 aa12.94□□□□□ -0.34
ALCAM-208ENST00000489178 POTEGQ6S5H5 508 aa12.93□□□□□ -0.34
ALCAM-208ENST00000489178 JPH4Q96JJ6 628 aa12.93□□□□□ -0.34
ALCAM-208ENST00000489178 HS3ST6Q96QI5 342 aa12.93□□□□□ -0.34
ALCAM-208ENST00000489178 POTEMA6NI47 508 aa12.92□□□□□ -0.34
ALCAM-208ENST00000489178 PHF14O94880 888 aa12.92□□□□□ -0.34
ALCAM-208ENST00000489178 SEMA3EO15041 775 aa12.91□□□□□ -0.34
ALCAM-208ENST00000489178 VARS2Q5ST30 1063 aaKnown RBP12.91□□□□□ -0.34
ALCAM-208ENST00000489178 PCDHGA10Q9Y5H3 936 aa12.91□□□□□ -0.34
ALCAM-208ENST00000489178 TESPA1A2RU30 521 aaPredicted RBP12.9□□□□□ -0.34
ALCAM-208ENST00000489178 ZNF687Q8N1G0 1237 aa12.88□□□□□ -0.35
ALCAM-208ENST00000489178 MLLT3P42568 568 aaPredicted RBP12.87□□□□□ -0.35
ALCAM-208ENST00000489178 ZNF454Q8N9F8 522 aa12.87□□□□□ -0.35
ALCAM-208ENST00000489178 DDX12PQ92771 950 aa12.87□□□□□ -0.35
ALCAM-208ENST00000489178 EPAS1Q99814 870 aa12.87□□□□□ -0.35
ALCAM-208ENST00000489178 OSBPP22059 807 aa12.85□□□□□ -0.35
ALCAM-208ENST00000489178 PPP4R3BQ5MIZ7 849 aa12.85□□□□□ -0.35
ALCAM-208ENST00000489178 TYW1BQ6NUM6 668 aa12.84□□□□□ -0.35
ALCAM-208ENST00000489178 POTEEQ6S8J3 1075 aa12.84□□□□□ -0.35
ALCAM-208ENST00000489178 ZDHHC16Q969W1 377 aa12.84□□□□□ -0.35
ALCAM-208ENST00000489178 FBXW7Q969H0 707 aa12.83□□□□□ -0.36
ALCAM-208ENST00000489178 GRXCR2A6NFK2 248 aa12.82□□□□□ -0.36
ALCAM-208ENST00000489178 PRIM1P49642 420 aaKnown RBP12.82□□□□□ -0.36
ALCAM-208ENST00000489178 BCL2L12Q9HB09 334 aa12.82□□□□□ -0.36
ALCAM-208ENST00000489178 ADAM33Q9BZ11 813 aa12.81□□□□□ -0.36
ALCAM-208ENST00000489178 EN1Q05925 392 aaPredicted RBP12.79□□□□□ -0.36
ALCAM-208ENST00000489178 NBR1Q14596 966 aa12.79□□□□□ -0.36
ALCAM-208ENST00000489178 PBX2P40425 430 aa12.77□□□□□ -0.37
ALCAM-208ENST00000489178 CDAN1Q8IWY9 1227 aa12.76□□□□□ -0.37
ALCAM-208ENST00000489178 SMYD5Q6GMV2 418 aa12.75□□□□□ -0.37
ALCAM-208ENST00000489178 KRTAP3-3Q9BYR6 98 aa12.75□□□□□ -0.37
ALCAM-208ENST00000489178 KRTAP3-2Q9BYR7 98 aa12.75□□□□□ -0.37
ALCAM-208ENST00000489178 PCDH10Q9P2E7 1040 aa12.75□□□□□ -0.37
ALCAM-208ENST00000489178 ARHGAP33O14559 1287 aa12.74□□□□□ -0.37
ALCAM-208ENST00000489178 C6orf132Q5T0Z8 1188 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms