RNA–Protein interactions for RNA: ENST00000488592.1

SCMH1-215, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 2

Gene SCMH1, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-215ENST00000488592 FYCO1Q9BQS8 1478 aa20.53■□□□□ 0.88
SCMH1-215ENST00000488592 PCF11O94913 1555 aaKnown RBP20.53■□□□□ 0.88
SCMH1-215ENST00000488592 MADDQ8WXG6 1647 aa20.5■□□□□ 0.87
SCMH1-215ENST00000488592 EFCAB2Q5VUJ9 269 aa20.5■□□□□ 0.87
SCMH1-215ENST00000488592 SCAPERQ9BY12 1400 aa20.5■□□□□ 0.87
SCMH1-215ENST00000488592 ZNF518AQ6AHZ1 1483 aa20.49■□□□□ 0.87
SCMH1-215ENST00000488592 KDM5CP41229 1560 aa20.48■□□□□ 0.87
SCMH1-215ENST00000488592 PREX2Q70Z35 1606 aa20.48■□□□□ 0.87
SCMH1-215ENST00000488592 EHMT2Q96KQ7 1210 aa20.47■□□□□ 0.87
SCMH1-215ENST00000488592 ATP1B4Q9UN42 357 aaPredicted RBP20.47■□□□□ 0.87
SCMH1-215ENST00000488592 ARHGAP5Q13017 1502 aa20.47■□□□□ 0.87
SCMH1-215ENST00000488592 CDC42BPBQ9Y5S2 1711 aa20.46■□□□□ 0.87
SCMH1-215ENST00000488592 YEATS2Q9ULM3 1422 aa20.44■□□□□ 0.86
SCMH1-215ENST00000488592 ARID4BQ4LE39 1312 aaPredicted RBP20.44■□□□□ 0.86
SCMH1-215ENST00000488592 RIMS1Q86UR5 1692 aaKnown RBP20.43■□□□□ 0.86
SCMH1-215ENST00000488592 REREQ9P2R6 1566 aa20.42■□□□□ 0.86
SCMH1-215ENST00000488592 SIGLEC1Q9BZZ2 1709 aa20.42■□□□□ 0.86
SCMH1-215ENST00000488592 C9orf84Q5VXU9 1444 aa20.42■□□□□ 0.86
SCMH1-215ENST00000488592 ATP10AO60312 1499 aa20.42■□□□□ 0.86
SCMH1-215ENST00000488592 FER1L4A9Z1Z3 1794 aa20.4■□□□□ 0.86
SCMH1-215ENST00000488592 ABCC1P33527 1531 aa20.4■□□□□ 0.86
SCMH1-215ENST00000488592 CDC42BPAQ5VT25 1732 aa20.4■□□□□ 0.86
SCMH1-215ENST00000488592 ITSN2Q9NZM3 1697 aa20.38■□□□□ 0.85
SCMH1-215ENST00000488592 ARHGEF12Q9NZN5 1544 aa20.37■□□□□ 0.85
SCMH1-215ENST00000488592 MLH3Q9UHC1 1453 aa20.37■□□□□ 0.85
SCMH1-215ENST00000488592 LMTK3Q96Q04 1460 aa20.34■□□□□ 0.85
SCMH1-215ENST00000488592 DIP2CQ9Y2E4 1556 aa20.34■□□□□ 0.85
SCMH1-215ENST00000488592 AGLP35573 1532 aa20.31■□□□□ 0.84
SCMH1-215ENST00000488592 ABCA6Q8N139 1617 aa20.3■□□□□ 0.84
SCMH1-215ENST00000488592 PLEKHH2Q8IVE3 1493 aa20.28■□□□□ 0.84
SCMH1-215ENST00000488592 GPATCH8Q9UKJ3 1502 aaKnown RBP20.27■□□□□ 0.84
SCMH1-215ENST00000488592 KIDINS220Q9ULH0 1771 aa20.27■□□□□ 0.84
SCMH1-215ENST00000488592 AFAP1Q8N556 730 aa20.27■□□□□ 0.84
SCMH1-215ENST00000488592 SETD1BQ9UPS6 1966 aaKnown RBP20.26■□□□□ 0.83
SCMH1-215ENST00000488592 SAMD9LQ8IVG5 1584 aa20.26■□□□□ 0.83
SCMH1-215ENST00000488592 KIAA1107Q9UPP5 1409 aa20.26■□□□□ 0.83
SCMH1-215ENST00000488592 TRAPPC8Q9Y2L5 1435 aa20.26■□□□□ 0.83
SCMH1-215ENST00000488592 EHBP1L1Q8N3D4 1523 aa20.25■□□□□ 0.83
SCMH1-215ENST00000488592 PREX1Q8TCU6 1659 aa20.24■□□□□ 0.83
SCMH1-215ENST00000488592 CEP162Q5TB80 1403 aa20.23■□□□□ 0.83
SCMH1-215ENST00000488592 MTUS2Q5JR59 1369 aa20.22■□□□□ 0.83
SCMH1-215ENST00000488592 SYCP2Q9BX26 1530 aa20.22■□□□□ 0.83
SCMH1-215ENST00000488592 CCNB3Q8WWL7 1395 aa20.2■□□□□ 0.82
SCMH1-215ENST00000488592 INO80Q9ULG1 1556 aaPredicted RBP20.19■□□□□ 0.82
SCMH1-215ENST00000488592 MLECQ14165 292 aa20.18■□□□□ 0.82
SCMH1-215ENST00000488592 ILDR1Q86SU0 546 aaPredicted RBP20.18■□□□□ 0.82
SCMH1-215ENST00000488592 CNTLNQ9NXG0 1405 aa20.18■□□□□ 0.82
SCMH1-215ENST00000488592 TIAM1Q13009 1591 aa20.17■□□□□ 0.82
SCMH1-215ENST00000488592 ATP7AQ04656 1500 aa20.17■□□□□ 0.82
SCMH1-215ENST00000488592 MYT1LQ9UL68 1186 aa20.16■□□□□ 0.82
SCMH1-215ENST00000488592 MROH2AA6NES4 1674 aa20.16■□□□□ 0.82
SCMH1-215ENST00000488592 CFDP1Q9UEE9 299 aaPredicted RBP20.15■□□□□ 0.82
SCMH1-215ENST00000488592 PLXNC1O60486 1568 aa20.15■□□□□ 0.82
SCMH1-215ENST00000488592 C3P01024 1663 aa20.15■□□□□ 0.82
SCMH1-215ENST00000488592 SUPT6HQ7KZ85 1726 aaKnown RBP20.13■□□□□ 0.81
SCMH1-215ENST00000488592 ADGBQ8N7X0 1667 aa20.13■□□□□ 0.81
SCMH1-215ENST00000488592 SPAG9O60271 1321 aaKnown RBP20.12■□□□□ 0.81
SCMH1-215ENST00000488592 UHRF1BP1Q6BDS2 1440 aa20.1■□□□□ 0.81
SCMH1-215ENST00000488592 ZNF777Q9ULD5 760 aaPredicted RBP20.09■□□□□ 0.81
SCMH1-215ENST00000488592 RTEL1-TNFRSF6BF6WH68 1400 aa20.08■□□□□ 0.8
SCMH1-215ENST00000488592 A2MP01023 1474 aa20.07■□□□□ 0.8
SCMH1-215ENST00000488592 MBD5Q9P267 1494 aa20.07■□□□□ 0.8
SCMH1-215ENST00000488592 ESF1Q9H501 851 aaKnown RBP20.07■□□□□ 0.8
SCMH1-215ENST00000488592 NPATQ14207 1427 aa20.07■□□□□ 0.8
SCMH1-215ENST00000488592 VPS8Q8N3P4 1428 aa20.07■□□□□ 0.8
SCMH1-215ENST00000488592 MAP3K1Q13233 1512 aa20.07■□□□□ 0.8
SCMH1-215ENST00000488592 HNRNPMP52272 730 aaKnown RBP eCLIP20.05■□□□□ 0.84e-6■■■□□ 18.4
SCMH1-215ENST00000488592 FBXO41Q8TF61 875 aa20.05■□□□□ 0.8
SCMH1-215ENST00000488592 NCOA2Q15596 1464 aa20.05■□□□□ 0.8
SCMH1-215ENST00000488592 HSPA2P54652 639 aa20.04■□□□□ 0.8
SCMH1-215ENST00000488592 FAM135AQ9P2D6 1515 aa20.03■□□□□ 0.8
SCMH1-215ENST00000488592 PPP6R1Q9UPN7 881 aa20.03■□□□□ 0.8
SCMH1-215ENST00000488592 RSPH4AQ5TD94 716 aa20.02■□□□□ 0.8
SCMH1-215ENST00000488592 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
SCMH1-215ENST00000488592 STRCQ7RTU9 1775 aa20.02■□□□□ 0.8
SCMH1-215ENST00000488592 ARHGEF5Q12774 1597 aa20.01■□□□□ 0.79
SCMH1-215ENST00000488592 CCDC141Q6ZP82 1450 aa20.01■□□□□ 0.79
SCMH1-215ENST00000488592 CEBPAP49715 358 aaPredicted RBP20.01■□□□□ 0.79
SCMH1-215ENST00000488592 DMRT2Q9Y5R5 561 aa20■□□□□ 0.79
SCMH1-215ENST00000488592 CAMSAP2Q08AD1 1489 aa19.99■□□□□ 0.79
SCMH1-215ENST00000488592 LRRC9Q6ZRR7 1453 aa19.99■□□□□ 0.79
SCMH1-215ENST00000488592 CLTCQ00610 1675 aaKnown RBP19.98■□□□□ 0.79
SCMH1-215ENST00000488592 ZNF142P52746 1687 aaPredicted RBP19.97■□□□□ 0.79
SCMH1-215ENST00000488592 ZMYM3Q14202 1370 aa19.95■□□□□ 0.79
SCMH1-215ENST00000488592 PTPRTO14522 1441 aa19.95■□□□□ 0.78
SCMH1-215ENST00000488592 ZNF644Q9H582 1327 aaPredicted RBP19.95■□□□□ 0.78
SCMH1-215ENST00000488592 DHX29Q7Z478 1369 aaKnown RBP19.95■□□□□ 0.78
SCMH1-215ENST00000488592 MAST1Q9Y2H9 1570 aa19.92■□□□□ 0.78
SCMH1-215ENST00000488592 MYO3AQ8NEV4 1616 aa19.92■□□□□ 0.78
SCMH1-215ENST00000488592 NCOA1Q15788 1441 aa19.92■□□□□ 0.78
SCMH1-215ENST00000488592 MIA2Q96PC5 1412 aa19.91■□□□□ 0.78
SCMH1-215ENST00000488592 PTPRKQ15262 1439 aa19.9■□□□□ 0.78
SCMH1-215ENST00000488592 KDM5DQ9BY66 1539 aa19.88■□□□□ 0.77
SCMH1-215ENST00000488592 PLA2R1Q13018 1463 aa19.88■□□□□ 0.77
SCMH1-215ENST00000488592 CEP170BQ9Y4F5 1589 aaPredicted RBP19.87■□□□□ 0.77
SCMH1-215ENST00000488592 CERKQ8TCT0 537 aa19.87■□□□□ 0.77
SCMH1-215ENST00000488592 MYOM3Q5VTT5 1437 aa19.86■□□□□ 0.77
SCMH1-215ENST00000488592 CAMSAP1Q5T5Y3 1602 aa19.86■□□□□ 0.77
SCMH1-215ENST00000488592 EIF2AK4Q9P2K8 1649 aaKnown RBP19.86■□□□□ 0.77
SCMH1-215ENST00000488592 RNF17Q9BXT8 1623 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 1010.9 ms