RNA–Protein interactions for RNA: ENST00000488592.1

SCMH1-215, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 2

Gene SCMH1, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-215ENST00000488592 NISCHQ9Y2I1 1504 aa31.44■■■□□ 2.62
SCMH1-215ENST00000488592 CCDC180Q9P1Z9 1646 aa28.31■■■□□ 2.12
SCMH1-215ENST00000488592 ABCC9O60706 1549 aa27.88■■■□□ 2.05
SCMH1-215ENST00000488592 RB1CC1Q8TDY2 1594 aa26.8■■□□□ 1.88
SCMH1-215ENST00000488592 NACADO15069 1562 aa26.68■■□□□ 1.86
SCMH1-215ENST00000488592 MYO15BQ96JP2 1530 aa26.46■■□□□ 1.83
SCMH1-215ENST00000488592 UNC13AQ9UPW8 1703 aa26.17■■□□□ 1.78
SCMH1-215ENST00000488592 DCAF8L2P0C7V8 631 aa26.17■■□□□ 1.78
SCMH1-215ENST00000488592 DCAF1Q9Y4B6 1507 aa26.13■■□□□ 1.77
SCMH1-215ENST00000488592 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
SCMH1-215ENST00000488592 BICRAQ9NZM4 1560 aa25.95■■□□□ 1.74
SCMH1-215ENST00000488592 DNAJC5BQ9UF47 199 aa25.94■■□□□ 1.74
SCMH1-215ENST00000488592 PABPN1Q86U42 306 aaKnown RBP eCLIP25.87■■□□□ 1.73
SCMH1-215ENST00000488592 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
SCMH1-215ENST00000488592 SCRIBQ14160 1630 aa25.58■■□□□ 1.69
SCMH1-215ENST00000488592 EIF4G1Q04637 1599 aaKnown RBP25.31■■□□□ 1.64
SCMH1-215ENST00000488592 CC2D2AQ9P2K1 1620 aa25.3■■□□□ 1.64
SCMH1-215ENST00000488592 CECR2Q9BXF3 1484 aa25.19■■□□□ 1.62
SCMH1-215ENST00000488592 NCAPD3P42695 1498 aa24.58■■□□□ 1.53
SCMH1-215ENST00000488592 SMARCA4P51532 1647 aa24.51■■□□□ 1.51
SCMH1-215ENST00000488592 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
SCMH1-215ENST00000488592 HMGXB3Q12766 1538 aa24.47■■□□□ 1.51
SCMH1-215ENST00000488592 ATAD2BQ9ULI0 1458 aa24.47■■□□□ 1.51
SCMH1-215ENST00000488592 BAZ1AQ9NRL2 1556 aaPredicted RBP24.45■■□□□ 1.5
SCMH1-215ENST00000488592 PEG3Q9GZU2 1588 aa24.37■■□□□ 1.49
SCMH1-215ENST00000488592 BAZ1BQ9UIG0 1483 aaKnown RBP24.24■■□□□ 1.47
SCMH1-215ENST00000488592 CUX2O14529 1486 aa24.18■■□□□ 1.46
SCMH1-215ENST00000488592 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
SCMH1-215ENST00000488592 ERCC6Q03468 1493 aa24.13■■□□□ 1.45
SCMH1-215ENST00000488592 LAMC3Q9Y6N6 1575 aa24.04■■□□□ 1.44
SCMH1-215ENST00000488592 NESP48681 1621 aa23.98■■□□□ 1.43
SCMH1-215ENST00000488592 THOC2Q8NI27 1593 aaKnown RBP23.87■■□□□ 1.41
SCMH1-215ENST00000488592 DNAJC5Q9H3Z4 198 aa23.87■■□□□ 1.41
SCMH1-215ENST00000488592 WIZO95785 1651 aa23.86■■□□□ 1.41
SCMH1-215ENST00000488592 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
SCMH1-215ENST00000488592 KIF21AQ7Z4S6 1674 aa23.79■■□□□ 1.4
SCMH1-215ENST00000488592 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
SCMH1-215ENST00000488592 RSF1Q96T23 1441 aaPredicted RBP23.71■■□□□ 1.39
SCMH1-215ENST00000488592 TOP2AP11388 1531 aaKnown RBP23.67■■□□□ 1.38
SCMH1-215ENST00000488592 MRC2Q9UBG0 1479 aa23.62■■□□□ 1.37
SCMH1-215ENST00000488592 WDR62O43379 1518 aa23.6■■□□□ 1.37
SCMH1-215ENST00000488592 CFTRP13569 1480 aa23.58■■□□□ 1.37
SCMH1-215ENST00000488592 CEP164Q9UPV0 1460 aa23.55■■□□□ 1.36
SCMH1-215ENST00000488592 FANCD2Q9BXW9 1451 aa23.5■■□□□ 1.35
SCMH1-215ENST00000488592 PRDM2Q13029 1718 aa23.48■■□□□ 1.35
SCMH1-215ENST00000488592 CCDC88BA6NC98 1476 aa23.3■■□□□ 1.32
SCMH1-215ENST00000488592 URB2Q14146 1524 aaKnown RBP23.28■■□□□ 1.32
SCMH1-215ENST00000488592 ABCC8Q09428 1581 aa23.16■■□□□ 1.3
SCMH1-215ENST00000488592 IFT140Q96RY7 1462 aa23.1■■□□□ 1.29
SCMH1-215ENST00000488592 TOPBP1Q92547 1522 aa23.08■■□□□ 1.29
SCMH1-215ENST00000488592 DNMBPQ6XZF7 1577 aa23.06■■□□□ 1.28
SCMH1-215ENST00000488592 OSCARQ8IYS5 282 aa22.95■■□□□ 1.26
SCMH1-215ENST00000488592 ZNF608Q9ULD9 1512 aaPredicted RBP22.92■■□□□ 1.26
SCMH1-215ENST00000488592 EIF4G3O43432 1585 aaKnown RBP22.91■■□□□ 1.26
SCMH1-215ENST00000488592 TARBP1Q13395 1621 aaKnown RBP22.9■■□□□ 1.26
SCMH1-215ENST00000488592 WDR97A6NE52 1622 aa22.86■■□□□ 1.25
SCMH1-215ENST00000488592 POLA1P09884 1462 aaPredicted RBP22.85■■□□□ 1.25
SCMH1-215ENST00000488592 SOGA1O94964 1423 aa22.71■■□□□ 1.23
SCMH1-215ENST00000488592 AQRO60306 1485 aaKnown RBP eCLIP22.71■■□□□ 1.23
SCMH1-215ENST00000488592 CUX1P39880 1505 aa22.71■■□□□ 1.23
SCMH1-215ENST00000488592 TRIM41Q8WV44 630 aa22.7■■□□□ 1.22
SCMH1-215ENST00000488592 FGD5Q6ZNL6 1462 aa22.7■■□□□ 1.22
SCMH1-215ENST00000488592 CHD1O14646 1710 aa22.7■■□□□ 1.22
SCMH1-215ENST00000488592 RIMBP3CA6NJZ7 1639 aa22.68■■□□□ 1.22
SCMH1-215ENST00000488592 RIMBP3BA6NNM3 1639 aa22.68■■□□□ 1.22
SCMH1-215ENST00000488592 RIMBP3Q9UFD9 1639 aa22.68■■□□□ 1.22
SCMH1-215ENST00000488592 RAD54L2Q9Y4B4 1467 aa22.66■■□□□ 1.22
SCMH1-215ENST00000488592 ARHGEF11O15085 1522 aa22.63■■□□□ 1.21
SCMH1-215ENST00000488592 MAGI1Q96QZ7 1491 aaPredicted RBP22.6■■□□□ 1.21
SCMH1-215ENST00000488592 TDRD9Q8NDG6 1382 aaKnown RBP22.57■■□□□ 1.2
SCMH1-215ENST00000488592 GRIN2BQ13224 1484 aa22.56■■□□□ 1.2
SCMH1-215ENST00000488592 SNAPC4Q5SXM2 1469 aa22.54■■□□□ 1.2
SCMH1-215ENST00000488592 SUPT5HO00267 1087 aaKnown RBP22.54■■□□□ 1.2
SCMH1-215ENST00000488592 ABCA10Q8WWZ4 1543 aa22.53■■□□□ 1.2
SCMH1-215ENST00000488592 PBRM1Q86U86 1689 aa22.51■■□□□ 1.19
SCMH1-215ENST00000488592 ABCA5Q8WWZ7 1642 aa22.5■■□□□ 1.19
SCMH1-215ENST00000488592 SYNJ1O43426 1573 aa22.49■■□□□ 1.19
SCMH1-215ENST00000488592 SYNJ2O15056 1496 aa22.48■■□□□ 1.19
SCMH1-215ENST00000488592 CLASP1Q7Z460 1538 aa22.48■■□□□ 1.19
SCMH1-215ENST00000488592 BIVM-ERCC5R4GMW8 1640 aa22.48■■□□□ 1.19
SCMH1-215ENST00000488592 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
SCMH1-215ENST00000488592 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
SCMH1-215ENST00000488592 FBLN2P98095 1184 aa22.44■■□□□ 1.18
SCMH1-215ENST00000488592 WRNQ14191 1432 aaPredicted RBP eCLIP22.43■■□□□ 1.18
SCMH1-215ENST00000488592 CHMP7Q8WUX9 453 aaPredicted RBP22.4■■□□□ 1.18
SCMH1-215ENST00000488592 ARAP1Q96P48 1450 aa22.4■■□□□ 1.18
SCMH1-215ENST00000488592 CYB5RLQ6IPT4 315 aa22.31■■□□□ 1.16
SCMH1-215ENST00000488592 ADAMTS12P58397 1594 aa22.3■■□□□ 1.16
SCMH1-215ENST00000488592 ERICH3Q5RHP9 1530 aa22.28■■□□□ 1.16
SCMH1-215ENST00000488592 GRIN2AQ12879 1464 aa22.27■■□□□ 1.16
SCMH1-215ENST00000488592 FHAD1B1AJZ9 1412 aa22.23■■□□□ 1.15
SCMH1-215ENST00000488592 NUP160Q12769 1436 aa22.22■■□□□ 1.15
SCMH1-215ENST00000488592 CEP170Q5SW79 1584 aa22.15■■□□□ 1.14
SCMH1-215ENST00000488592 SHROOM2Q13796 1616 aa22.14■■□□□ 1.14
SCMH1-215ENST00000488592 AEBP2Q6ZN18 517 aaPredicted RBP22.06■■□□□ 1.12
SCMH1-215ENST00000488592 CUL7Q14999 1698 aa22.01■■□□□ 1.11
SCMH1-215ENST00000488592 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
SCMH1-215ENST00000488592 TRHP20396 242 aaPredicted RBP21.99■■□□□ 1.11
SCMH1-215ENST00000488592 RUSC2Q8N2Y8 1516 aa21.99■■□□□ 1.11
SCMH1-215ENST00000488592 KIF27Q86VH2 1401 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms