RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 ZMYM4Q5VZL5 1548 aa22.77■■□□□ 1.24
COL9A2-208ENST00000488463 VPS8Q8N3P4 1428 aa22.76■■□□□ 1.23
COL9A2-208ENST00000488463 EFCAB2Q5VUJ9 269 aa22.76■■□□□ 1.23
COL9A2-208ENST00000488463 ARHGAP5Q13017 1502 aa22.75■■□□□ 1.23
COL9A2-208ENST00000488463 SCAPERQ9BY12 1400 aa22.74■■□□□ 1.23
COL9A2-208ENST00000488463 POGZQ7Z3K3 1410 aa22.74■■□□□ 1.23
COL9A2-208ENST00000488463 GPATCH8Q9UKJ3 1502 aaKnown RBP22.72■■□□□ 1.23
COL9A2-208ENST00000488463 ARHGEF40Q8TER5 1519 aa22.71■■□□□ 1.23
COL9A2-208ENST00000488463 EHBP1L1Q8N3D4 1523 aa22.7■■□□□ 1.22
COL9A2-208ENST00000488463 TIAM1Q13009 1591 aa22.69■■□□□ 1.22
COL9A2-208ENST00000488463 MTUS2Q5JR59 1369 aa22.69■■□□□ 1.22
COL9A2-208ENST00000488463 ARHGEF12Q9NZN5 1544 aa22.68■■□□□ 1.22
COL9A2-208ENST00000488463 ABCC1P33527 1531 aa22.67■■□□□ 1.22
COL9A2-208ENST00000488463 MAGI2Q86UL8 1455 aa22.66■■□□□ 1.22
COL9A2-208ENST00000488463 YEATS2Q9ULM3 1422 aa22.66■■□□□ 1.22
COL9A2-208ENST00000488463 KDM5CP41229 1560 aa22.66■■□□□ 1.22
COL9A2-208ENST00000488463 SAMD9LQ8IVG5 1584 aa22.64■■□□□ 1.22
COL9A2-208ENST00000488463 ZFYVE16Q7Z3T8 1539 aa22.64■■□□□ 1.21
COL9A2-208ENST00000488463 SIGLEC1Q9BZZ2 1709 aa22.64■■□□□ 1.21
COL9A2-208ENST00000488463 ITSN2Q9NZM3 1697 aa22.64■■□□□ 1.21
COL9A2-208ENST00000488463 ZNF518AQ6AHZ1 1483 aa22.63■■□□□ 1.21
COL9A2-208ENST00000488463 MAP3K1Q13233 1512 aa22.62■■□□□ 1.21
COL9A2-208ENST00000488463 AFAP1Q8N556 730 aa22.61■■□□□ 1.21
COL9A2-208ENST00000488463 TRAPPC8Q9Y2L5 1435 aa22.61■■□□□ 1.21
COL9A2-208ENST00000488463 CCNB3Q8WWL7 1395 aa22.6■■□□□ 1.21
COL9A2-208ENST00000488463 LRRC9Q6ZRR7 1453 aa22.59■■□□□ 1.21
COL9A2-208ENST00000488463 ADAMTSL3P82987 1691 aa22.58■■□□□ 1.21
COL9A2-208ENST00000488463 NCOA2Q15596 1464 aa22.58■■□□□ 1.2
COL9A2-208ENST00000488463 BCORL1Q5H9F3 1711 aa22.57■■□□□ 1.2
COL9A2-208ENST00000488463 SUPT6HQ7KZ85 1726 aaKnown RBP22.57■■□□□ 1.2
COL9A2-208ENST00000488463 MLH3Q9UHC1 1453 aa22.56■■□□□ 1.2
COL9A2-208ENST00000488463 HECW2Q9P2P5 1572 aa22.55■■□□□ 1.2
COL9A2-208ENST00000488463 CFDP1Q9UEE9 299 aaPredicted RBP22.55■■□□□ 1.2
COL9A2-208ENST00000488463 SYCP2Q9BX26 1530 aa22.55■■□□□ 1.2
COL9A2-208ENST00000488463 KANK4Q5T7N3 995 aaPredicted RBP22.54■■□□□ 1.2
COL9A2-208ENST00000488463 KIAA1107Q9UPP5 1409 aa22.54■■□□□ 1.2
COL9A2-208ENST00000488463 ATP10AO60312 1499 aa22.54■■□□□ 1.2
COL9A2-208ENST00000488463 DIP2CQ9Y2E4 1556 aa22.53■■□□□ 1.2
COL9A2-208ENST00000488463 KIDINS220Q9ULH0 1771 aa22.52■■□□□ 1.2
COL9A2-208ENST00000488463 ABCA6Q8N139 1617 aa22.51■■□□□ 1.19
COL9A2-208ENST00000488463 ZNF777Q9ULD5 760 aaPredicted RBP22.51■■□□□ 1.19
COL9A2-208ENST00000488463 PLEKHH2Q8IVE3 1493 aa22.51■■□□□ 1.19
COL9A2-208ENST00000488463 ZNF644Q9H582 1327 aaPredicted RBP22.5■■□□□ 1.19
COL9A2-208ENST00000488463 C9orf84Q5VXU9 1444 aa22.49■■□□□ 1.19
COL9A2-208ENST00000488463 HNRNPMP52272 730 aaKnown RBP eCLIP22.49■■□□□ 1.19
COL9A2-208ENST00000488463 MBD5Q9P267 1494 aa22.48■■□□□ 1.19
COL9A2-208ENST00000488463 REREQ9P2R6 1566 aa22.48■■□□□ 1.19
COL9A2-208ENST00000488463 MADDQ8WXG6 1647 aa22.48■■□□□ 1.19
COL9A2-208ENST00000488463 ARID4BQ4LE39 1312 aaPredicted RBP22.46■■□□□ 1.19
COL9A2-208ENST00000488463 INO80Q9ULG1 1556 aaPredicted RBP22.44■■□□□ 1.18
COL9A2-208ENST00000488463 PTPRMP28827 1452 aa22.43■■□□□ 1.18
COL9A2-208ENST00000488463 ILDR1Q86SU0 546 aaPredicted RBP22.42■■□□□ 1.18
COL9A2-208ENST00000488463 CAMSAP2Q08AD1 1489 aa22.41■■□□□ 1.18
COL9A2-208ENST00000488463 ATP7AQ04656 1500 aa22.41■■□□□ 1.18
COL9A2-208ENST00000488463 SPAG9O60271 1321 aaKnown RBP22.39■■□□□ 1.18
COL9A2-208ENST00000488463 AGLP35573 1532 aa22.39■■□□□ 1.17
COL9A2-208ENST00000488463 RIMS1Q86UR5 1692 aaKnown RBP22.39■■□□□ 1.17
COL9A2-208ENST00000488463 MYOM3Q5VTT5 1437 aa22.37■■□□□ 1.17
COL9A2-208ENST00000488463 FER1L4A9Z1Z3 1794 aa22.36■■□□□ 1.17
COL9A2-208ENST00000488463 PLXNC1O60486 1568 aa22.35■■□□□ 1.17
COL9A2-208ENST00000488463 ARHGEF5Q12774 1597 aa22.35■■□□□ 1.17
COL9A2-208ENST00000488463 MIA2Q96PC5 1412 aa22.34■■□□□ 1.17
COL9A2-208ENST00000488463 MYT1LQ9UL68 1186 aa22.34■■□□□ 1.17
COL9A2-208ENST00000488463 CCDC141Q6ZP82 1450 aa22.34■■□□□ 1.17
COL9A2-208ENST00000488463 MLECQ14165 292 aa22.33■■□□□ 1.17
COL9A2-208ENST00000488463 RTEL1-TNFRSF6BF6WH68 1400 aa22.32■■□□□ 1.16
COL9A2-208ENST00000488463 APLP2Q06481 763 aa22.32■■□□□ 1.16
COL9A2-208ENST00000488463 ADGBQ8N7X0 1667 aa22.29■■□□□ 1.16
COL9A2-208ENST00000488463 A2MP01023 1474 aa22.28■■□□□ 1.16
COL9A2-208ENST00000488463 RSPH4AQ5TD94 716 aa22.28■■□□□ 1.16
COL9A2-208ENST00000488463 MAST1Q9Y2H9 1570 aa22.25■■□□□ 1.15
COL9A2-208ENST00000488463 PTPN23Q9H3S7 1636 aa22.24■■□□□ 1.15
COL9A2-208ENST00000488463 FGD6Q6ZV73 1430 aa22.23■■□□□ 1.15
COL9A2-208ENST00000488463 TCOF1Q13428 1488 aaKnown RBP22.22■■□□□ 1.15
COL9A2-208ENST00000488463 DHX29Q7Z478 1369 aaKnown RBP22.21■■□□□ 1.15
COL9A2-208ENST00000488463 LMTK3Q96Q04 1460 aa22.19■■□□□ 1.14
COL9A2-208ENST00000488463 C3P01024 1663 aa22.18■■□□□ 1.14
COL9A2-208ENST00000488463 CROCC2H7BZ55 1655 aa22.17■■□□□ 1.14
COL9A2-208ENST00000488463 ABCC5O15440 1437 aa22.17■■□□□ 1.14
COL9A2-208ENST00000488463 CEBPAP49715 358 aaPredicted RBP22.16■■□□□ 1.14
COL9A2-208ENST00000488463 MROH2AA6NES4 1674 aa22.15■■□□□ 1.14
COL9A2-208ENST00000488463 TSPY4P0CV99 314 aa22.15■■□□□ 1.14
COL9A2-208ENST00000488463 TSPY10P0CW01 314 aa22.15■■□□□ 1.14
COL9A2-208ENST00000488463 DNMT1P26358 1616 aaKnown RBP22.15■■□□□ 1.14
COL9A2-208ENST00000488463 SHANK2Q9UPX8 1470 aa22.14■■□□□ 1.13
COL9A2-208ENST00000488463 CNTLNQ9NXG0 1405 aa22.14■■□□□ 1.13
COL9A2-208ENST00000488463 DAPK1P53355 1430 aa22.12■■□□□ 1.13
COL9A2-208ENST00000488463 CLTCQ00610 1675 aaKnown RBP22.11■■□□□ 1.13
COL9A2-208ENST00000488463 SETD1BQ9UPS6 1966 aaKnown RBP22.11■■□□□ 1.13
COL9A2-208ENST00000488463 PLPPR3Q6T4P5 718 aa22.11■■□□□ 1.13
COL9A2-208ENST00000488463 PREX1Q8TCU6 1659 aa22.09■■□□□ 1.13
COL9A2-208ENST00000488463 GGT6Q6P531 493 aa22.08■■□□□ 1.13
COL9A2-208ENST00000488463 PPP6R1Q9UPN7 881 aa22.08■■□□□ 1.13
COL9A2-208ENST00000488463 ZMYM3Q14202 1370 aa22.07■■□□□ 1.12
COL9A2-208ENST00000488463 RNF17Q9BXT8 1623 aaKnown RBP22.06■■□□□ 1.12
COL9A2-208ENST00000488463 KIF3BO15066 747 aa22.06■■□□□ 1.12
COL9A2-208ENST00000488463 EIF2AK4Q9P2K8 1649 aaKnown RBP22.06■■□□□ 1.12
COL9A2-208ENST00000488463 ESF1Q9H501 851 aaKnown RBP22.05■■□□□ 1.12
COL9A2-208ENST00000488463 DUOX2Q9NRD8 1548 aa22.05■■□□□ 1.12
COL9A2-208ENST00000488463 FAM135AQ9P2D6 1515 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms