RNA–Protein interactions for RNA: ENST00000488423.1

DPH3-204, Transcript of diphthamide biosynthesis 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DPH3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPH3-204ENST00000488423 ZNF777Q9ULD5 760 aaPredicted RBP12.76□□□□□ -0.37
DPH3-204ENST00000488423 KIF14Q15058 1648 aa12.76□□□□□ -0.37
DPH3-204ENST00000488423 PTPRGP23470 1445 aa12.75□□□□□ -0.37
DPH3-204ENST00000488423 ROCK1Q13464 1354 aa12.75□□□□□ -0.37
DPH3-204ENST00000488423 GPATCH8Q9UKJ3 1502 aaKnown RBP12.75□□□□□ -0.37
DPH3-204ENST00000488423 KDM6BO15054 1643 aa12.75□□□□□ -0.37
DPH3-204ENST00000488423 CHD1O14646 1710 aa12.75□□□□□ -0.37
DPH3-204ENST00000488423 ITSN2Q9NZM3 1697 aa12.75□□□□□ -0.37
DPH3-204ENST00000488423 ATP10BO94823 1461 aa12.74□□□□□ -0.37
DPH3-204ENST00000488423 CAMSAP2Q08AD1 1489 aa12.74□□□□□ -0.37
DPH3-204ENST00000488423 ADCY10Q96PN6 1610 aa12.74□□□□□ -0.37
DPH3-204ENST00000488423 MPHOSPH9Q99550 1183 aa12.72□□□□□ -0.37
DPH3-204ENST00000488423 DENND4BO75064 1496 aaPredicted RBP12.69□□□□□ -0.38
DPH3-204ENST00000488423 FOXD1Q16676 465 aa12.67□□□□□ -0.38
DPH3-204ENST00000488423 HIRIP3Q9BW71 556 aaPredicted RBP12.67□□□□□ -0.38
DPH3-204ENST00000488423 ABCC10Q5T3U5 1492 aa12.67□□□□□ -0.38
DPH3-204ENST00000488423 NCOA1Q15788 1441 aa12.66□□□□□ -0.38
DPH3-204ENST00000488423 SHROOM2Q13796 1616 aa12.66□□□□□ -0.38
DPH3-204ENST00000488423 SLC4A1APQ9BWU0 796 aaKnown RBP12.66□□□□□ -0.38
DPH3-204ENST00000488423 CDC42BPAQ5VT25 1732 aa12.65□□□□□ -0.38
DPH3-204ENST00000488423 DDX10Q13206 875 aaKnown RBP12.65□□□□□ -0.38
DPH3-204ENST00000488423 ANKRD30AQ9BXX3 1397 aa12.65□□□□□ -0.38
DPH3-204ENST00000488423 ADGBQ8N7X0 1667 aa12.64□□□□□ -0.39
DPH3-204ENST00000488423 ADGRL2O95490 1459 aa12.64□□□□□ -0.39
DPH3-204ENST00000488423 GTF3C3Q9Y5Q9 886 aa12.63□□□□□ -0.39
DPH3-204ENST00000488423 CROCC2H7BZ55 1655 aa12.63□□□□□ -0.39
DPH3-204ENST00000488423 ERCC6L2Q5T890 1561 aa12.63□□□□□ -0.39
DPH3-204ENST00000488423 TSPY4P0CV99 314 aa12.62□□□□□ -0.39
DPH3-204ENST00000488423 TSPY10P0CW01 314 aa12.62□□□□□ -0.39
DPH3-204ENST00000488423 KDM5BQ9UGL1 1544 aa12.62□□□□□ -0.39
DPH3-204ENST00000488423 ANKRD30BQ9BXX2 1392 aa12.61□□□□□ -0.39
DPH3-204ENST00000488423 C9orf84Q5VXU9 1444 aa12.61□□□□□ -0.39
DPH3-204ENST00000488423 HNRNPMP52272 730 aaKnown RBP eCLIP12.6□□□□□ -0.39
DPH3-204ENST00000488423 ANKRD50Q9ULJ7 1429 aa12.6□□□□□ -0.39
DPH3-204ENST00000488423 SHANK2Q9UPX8 1470 aa12.6□□□□□ -0.39
DPH3-204ENST00000488423 ABCC2Q92887 1545 aa12.6□□□□□ -0.39
DPH3-204ENST00000488423 L3MBTL2Q969R5 705 aa12.6□□□□□ -0.39
DPH3-204ENST00000488423 PZPP20742 1482 aa12.58□□□□□ -0.4
DPH3-204ENST00000488423 RPRD2Q5VT52 1461 aaKnown RBP12.58□□□□□ -0.4
DPH3-204ENST00000488423 CLASP1Q7Z460 1538 aa12.57□□□□□ -0.4
DPH3-204ENST00000488423 PREX2Q70Z35 1606 aa12.56□□□□□ -0.4
DPH3-204ENST00000488423 KCNH8Q96L42 1107 aa12.56□□□□□ -0.4
DPH3-204ENST00000488423 ARHGEF5Q12774 1597 aa12.55□□□□□ -0.4
DPH3-204ENST00000488423 KIF15Q9NS87 1388 aa12.55□□□□□ -0.4
DPH3-204ENST00000488423 MBD5Q9P267 1494 aa12.55□□□□□ -0.4
DPH3-204ENST00000488423 SAMD9LQ8IVG5 1584 aa12.55□□□□□ -0.4
DPH3-204ENST00000488423 PKD2Q13563 968 aa12.55□□□□□ -0.4
DPH3-204ENST00000488423 ARHGAP5Q13017 1502 aa12.55□□□□□ -0.4
DPH3-204ENST00000488423 CCDC141Q6ZP82 1450 aa12.55□□□□□ -0.4
DPH3-204ENST00000488423 CDC42BPBQ9Y5S2 1711 aa12.55□□□□□ -0.4
DPH3-204ENST00000488423 KIAA1107Q9UPP5 1409 aa12.54□□□□□ -0.4
DPH3-204ENST00000488423 RSPH4AQ5TD94 716 aa12.54□□□□□ -0.4
DPH3-204ENST00000488423 NUP155O75694 1391 aa12.54□□□□□ -0.4
DPH3-204ENST00000488423 TTC37Q6PGP7 1564 aa12.54□□□□□ -0.4
DPH3-204ENST00000488423 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.54□□□□□ -0.4
DPH3-204ENST00000488423 HSPA5P11021 654 aaKnown RBP12.53□□□□□ -0.4
DPH3-204ENST00000488423 EIF4G2P78344 907 aaKnown RBP eCLIP12.53□□□□□ -0.4
DPH3-204ENST00000488423 TEX14Q8IWB6 1497 aa12.53□□□□□ -0.4
DPH3-204ENST00000488423 ANP32CO43423 234 aa12.53□□□□□ -0.4
DPH3-204ENST00000488423 SYCP2Q9BX26 1530 aa12.52□□□□□ -0.41
DPH3-204ENST00000488423 UHRF1BP1LA0JNW5 1464 aa12.5□□□□□ -0.41
DPH3-204ENST00000488423 ZCCHC11Q5TAX3 1644 aaKnown RBP12.5□□□□□ -0.41
DPH3-204ENST00000488423 NBPF8Q3BBV2 869 aa12.5□□□□□ -0.41
DPH3-204ENST00000488423 MYO5CQ9NQX4 1742 aa12.49□□□□□ -0.41
DPH3-204ENST00000488423 PLEKHH2Q8IVE3 1493 aa12.48□□□□□ -0.41
DPH3-204ENST00000488423 WASHC2AQ641Q2 1341 aa12.47□□□□□ -0.41
DPH3-204ENST00000488423 KDM5DQ9BY66 1539 aa12.47□□□□□ -0.41
DPH3-204ENST00000488423 EFCAB2Q5VUJ9 269 aa12.46□□□□□ -0.41
DPH3-204ENST00000488423 PLCH2O75038 1416 aa12.46□□□□□ -0.41
DPH3-204ENST00000488423 ZNF326Q5BKZ1 582 aaKnown RBP12.46□□□□□ -0.42
DPH3-204ENST00000488423 CCER2I3L3R5 266 aa12.45□□□□□ -0.42
DPH3-204ENST00000488423 MAST1Q9Y2H9 1570 aa12.44□□□□□ -0.42
DPH3-204ENST00000488423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.43□□□□□ -0.42
DPH3-204ENST00000488423 ARHGEF12Q9NZN5 1544 aa12.42□□□□□ -0.42
DPH3-204ENST00000488423 FAM135AQ9P2D6 1515 aa12.42□□□□□ -0.42
DPH3-204ENST00000488423 PLXNC1O60486 1568 aa12.4□□□□□ -0.42
DPH3-204ENST00000488423 C11orf95C9JLR9 678 aaPredicted RBP12.4□□□□□ -0.42
DPH3-204ENST00000488423 CCDC7Q96M83 1385 aa12.4□□□□□ -0.42
DPH3-204ENST00000488423 WDR7Q9Y4E6 1490 aa12.4□□□□□ -0.42
DPH3-204ENST00000488423 SPATA31E1Q6ZUB1 1445 aa12.39□□□□□ -0.43
DPH3-204ENST00000488423 ABCC1P33527 1531 aa12.39□□□□□ -0.43
DPH3-204ENST00000488423 DUOX2Q9NRD8 1548 aa12.39□□□□□ -0.43
DPH3-204ENST00000488423 KDM2AQ9Y2K7 1162 aa12.38□□□□□ -0.43
DPH3-204ENST00000488423 TRAPPC8Q9Y2L5 1435 aa12.38□□□□□ -0.43
DPH3-204ENST00000488423 CNTLNQ9NXG0 1405 aa12.38□□□□□ -0.43
DPH3-204ENST00000488423 UNC13BO14795 1591 aa12.38□□□□□ -0.43
DPH3-204ENST00000488423 OSCARQ8IYS5 282 aa12.37□□□□□ -0.43
DPH3-204ENST00000488423 CCDC144AA2RUR9 1427 aa12.37□□□□□ -0.43
DPH3-204ENST00000488423 USP47Q96K76 1375 aa12.37□□□□□ -0.43
DPH3-204ENST00000488423 DCAF11Q8TEB1 546 aa12.37□□□□□ -0.43
DPH3-204ENST00000488423 ERBINQ96RT1 1412 aa12.37□□□□□ -0.43
DPH3-204ENST00000488423 SPAG9O60271 1321 aaKnown RBP12.36□□□□□ -0.43
DPH3-204ENST00000488423 UHRF1BP1Q6BDS2 1440 aa12.36□□□□□ -0.43
DPH3-204ENST00000488423 KIF7Q2M1P5 1343 aa12.36□□□□□ -0.43
DPH3-204ENST00000488423 ARAP3Q8WWN8 1544 aa12.36□□□□□ -0.43
DPH3-204ENST00000488423 AFAP1Q8N556 730 aa12.35□□□□□ -0.43
DPH3-204ENST00000488423 CARD11Q9BXL7 1154 aa12.35□□□□□ -0.43
DPH3-204ENST00000488423 FANCAO15360 1455 aa12.34□□□□□ -0.43
DPH3-204ENST00000488423 RALGAPBQ86X10 1494 aa12.34□□□□□ -0.43
DPH3-204ENST00000488423 IQGAP3Q86VI3 1631 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms