RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 CADPS2Q86UW7 1296 aa8.2□□□□□ -1.1
RBM28-207ENST00000488249 OTUD5Q96G74 571 aa8.18□□□□□ -1.1
RBM28-207ENST00000488249 TMEM92Q6UXU6 159 aa8.17□□□□□ -1.1
RBM28-207ENST00000488249 PDE4AP27815 886 aa8.16□□□□□ -1.1
RBM28-207ENST00000488249 CRISPLD2Q9H0B8 497 aa8.16□□□□□ -1.1
RBM28-207ENST00000488249 NCKAP5LQ9HCH0 1330 aa8.15□□□□□ -1.1
RBM28-207ENST00000488249 SLAIN1Q8ND83 568 aa8.15□□□□□ -1.1
RBM28-207ENST00000488249 TMC2Q8TDI7 906 aa8.15□□□□□ -1.1
RBM28-207ENST00000488249 C2orf72A6NCS6 295 aa8.14□□□□□ -1.11
RBM28-207ENST00000488249 KIF3CO14782 793 aa8.14□□□□□ -1.11
RBM28-207ENST00000488249 GPHNQ9NQX3 736 aaPredicted RBP8.14□□□□□ -1.11
RBM28-207ENST00000488249 LARP6Q9BRS8 491 aaKnown RBP8.12□□□□□ -1.11
RBM28-207ENST00000488249 FOXK1P85037 733 aa8.1□□□□□ -1.11
RBM28-207ENST00000488249 MFSD10Q14728 455 aa8.1□□□□□ -1.11
RBM28-207ENST00000488249 VSIG10Q8N0Z9 540 aa8.1□□□□□ -1.11
RBM28-207ENST00000488249 SLC24A1O60721 1099 aa8.09□□□□□ -1.11
RBM28-207ENST00000488249 DSG2Q14126 1118 aa8.09□□□□□ -1.11
RBM28-207ENST00000488249 DDX27Q96GQ7 796 aaKnown RBP8.09□□□□□ -1.11
RBM28-207ENST00000488249 PPP1R15BQ5SWA1 713 aa8.08□□□□□ -1.12
RBM28-207ENST00000488249 KDM2AQ9Y2K7 1162 aa8.08□□□□□ -1.12
RBM28-207ENST00000488249 PLPP6Q8IY26 295 aa8.07□□□□□ -1.12
RBM28-207ENST00000488249 WDR70Q9NW82 654 aa8.07□□□□□ -1.12
RBM28-207ENST00000488249 SNPHO15079 494 aa8.03□□□□□ -1.12
RBM28-207ENST00000488249 HOXB3P14651 431 aaPredicted RBP8.02□□□□□ -1.13
RBM28-207ENST00000488249 SLC34A2O95436 690 aa8□□□□□ -1.13
RBM28-207ENST00000488249 CAMK2BQ13554 666 aa8□□□□□ -1.13
RBM28-207ENST00000488249 E2F4Q16254 413 aa8□□□□□ -1.13
RBM28-207ENST00000488249 DOK7Q18PE1 504 aa8□□□□□ -1.13
RBM28-207ENST00000488249 RIMBP2O15034 1052 aa7.97□□□□□ -1.13
RBM28-207ENST00000488249 PTCD2Q8WV60 388 aaKnown RBP7.97□□□□□ -1.13
RBM28-207ENST00000488249 EMILIN3Q9NT22 766 aa7.97□□□□□ -1.13
RBM28-207ENST00000488249 ZNF710Q8N1W2 664 aa7.96□□□□□ -1.14
RBM28-207ENST00000488249 OXER1Q8TDS5 423 aa7.96□□□□□ -1.14
RBM28-207ENST00000488249 UPF1Q92900 1129 aaKnown RBP eCLIP7.96□□□□□ -1.14
RBM28-207ENST00000488249 POTEMA6NI47 508 aa7.95□□□□□ -1.14
RBM28-207ENST00000488249 P3H3Q8IVL6 736 aa7.95□□□□□ -1.14
RBM28-207ENST00000488249 KCNV2Q8TDN2 545 aa7.95□□□□□ -1.14
RBM28-207ENST00000488249 ZSWIM6Q9HCJ5 1215 aa7.95□□□□□ -1.14
RBM28-207ENST00000488249 TBC1D12O60347 775 aa7.94□□□□□ -1.14
RBM28-207ENST00000488249 PCDHGA4Q9Y5G9 962 aa7.94□□□□□ -1.14
RBM28-207ENST00000488249 GPR153Q6NV75 609 aa7.93□□□□□ -1.14
RBM28-207ENST00000488249 FAM163AQ96GL9 167 aaPredicted RBP7.93□□□□□ -1.14
RBM28-207ENST00000488249 ARIH1Q9Y4X5 557 aaPredicted RBP7.93□□□□□ -1.14
RBM28-207ENST00000488249 DPYSL4O14531 572 aa7.92□□□□□ -1.14
RBM28-207ENST00000488249 MAP3K9P80192 1104 aa7.92□□□□□ -1.14
RBM28-207ENST00000488249 ARSIQ5FYB1 569 aa7.92□□□□□ -1.14
RBM28-207ENST00000488249 ARHGEF1Q92888 912 aaKnown RBP7.92□□□□□ -1.14
RBM28-207ENST00000488249 ST18O60284 1047 aa7.91□□□□□ -1.14
RBM28-207ENST00000488249 HOXB1P14653 301 aaPredicted RBP7.91□□□□□ -1.14
RBM28-207ENST00000488249 POTEGQ6S5H5 508 aa7.9□□□□□ -1.14
RBM28-207ENST00000488249 KHSRPQ92945 711 aaKnown RBP eCLIP7.9□□□□□ -1.14
RBM28-207ENST00000488249 NUDT7P0C024 238 aa7.88□□□□□ -1.15
RBM28-207ENST00000488249 LCE2DQ5TA82 110 aaPredicted RBP7.88□□□□□ -1.15
RBM28-207ENST00000488249 KDM4FA0A1W2PPD8 638 aa7.87□□□□□ -1.15
RBM28-207ENST00000488249 EVI5O60447 810 aa7.87□□□□□ -1.15
RBM28-207ENST00000488249 SPDYE16A6NNV3 312 aaPredicted RBP7.86□□□□□ -1.15
RBM28-207ENST00000488249 PDIA6Q15084 440 aa7.86□□□□□ -1.15
RBM28-207ENST00000488249 ZNF316A6NFI3 1004 aaPredicted RBP7.85□□□□□ -1.15
RBM28-207ENST00000488249 ANO8Q9HCE9 1232 aaPredicted RBP7.85□□□□□ -1.15
RBM28-207ENST00000488249 MARVELD3Q96A59 401 aa7.83□□□□□ -1.16
RBM28-207ENST00000488249 EMP3P54852 163 aa7.82□□□□□ -1.16
RBM28-207ENST00000488249 LHX6Q9UPM6 363 aa7.82□□□□□ -1.16
RBM28-207ENST00000488249 PTGER2P43116 358 aa7.81□□□□□ -1.16
RBM28-207ENST00000488249 ERBB3P21860 1342 aa7.79□□□□□ -1.16
RBM28-207ENST00000488249 SEMA3EO15041 775 aa7.79□□□□□ -1.16
RBM28-207ENST00000488249 PSDA5PKW4 1024 aaPredicted RBP7.78□□□□□ -1.16
RBM28-207ENST00000488249 FAM205CA6NFA0 338 aa7.78□□□□□ -1.16
RBM28-207ENST00000488249 NBR1Q14596 966 aa7.78□□□□□ -1.16
RBM28-207ENST00000488249 DDX12PQ92771 950 aa7.78□□□□□ -1.16
RBM28-207ENST00000488249 FOSBP53539 338 aa7.77□□□□□ -1.17
RBM28-207ENST00000488249 VARS2Q5ST30 1063 aaKnown RBP7.77□□□□□ -1.17
RBM28-207ENST00000488249 JPH4Q96JJ6 628 aa7.77□□□□□ -1.17
RBM28-207ENST00000488249 TESPA1A2RU30 521 aaPredicted RBP7.76□□□□□ -1.17
RBM28-207ENST00000488249 GRXCR2A6NFK2 248 aa7.76□□□□□ -1.17
RBM28-207ENST00000488249 PHF14O94880 888 aa7.76□□□□□ -1.17
RBM28-207ENST00000488249 MLLT3P42568 568 aaPredicted RBP7.76□□□□□ -1.17
RBM28-207ENST00000488249 ZNF454Q8N9F8 522 aa7.76□□□□□ -1.17
RBM28-207ENST00000488249 HS3ST6Q96QI5 342 aa7.76□□□□□ -1.17
RBM28-207ENST00000488249 PCDHGA10Q9Y5H3 936 aa7.76□□□□□ -1.17
RBM28-207ENST00000488249 PPP4R3BQ5MIZ7 849 aa7.75□□□□□ -1.17
RBM28-207ENST00000488249 EPAS1Q99814 870 aa7.75□□□□□ -1.17
RBM28-207ENST00000488249 POTEB3A0JP26 581 aa7.74□□□□□ -1.17
RBM28-207ENST00000488249 POTEBQ6S5H4 581 aa7.74□□□□□ -1.17
RBM28-207ENST00000488249 BCANQ96GW7 911 aa7.74□□□□□ -1.17
RBM28-207ENST00000488249 TYW1BQ6NUM6 668 aa7.73□□□□□ -1.17
RBM28-207ENST00000488249 ZDHHC16Q969W1 377 aa7.73□□□□□ -1.17
RBM28-207ENST00000488249 OSBPP22059 807 aa7.72□□□□□ -1.17
RBM28-207ENST00000488249 SMYD5Q6GMV2 418 aa7.72□□□□□ -1.17
RBM28-207ENST00000488249 FBXW7Q969H0 707 aa7.72□□□□□ -1.17
RBM28-207ENST00000488249 ZNF687Q8N1G0 1237 aa7.71□□□□□ -1.18
RBM28-207ENST00000488249 ADAM33Q9BZ11 813 aa7.7□□□□□ -1.18
RBM28-207ENST00000488249 PRIM1P49642 420 aaKnown RBP7.69□□□□□ -1.18
RBM28-207ENST00000488249 EN1Q05925 392 aaPredicted RBP7.69□□□□□ -1.18
RBM28-207ENST00000488249 RBM33Q96EV2 1170 aaKnown RBP7.69□□□□□ -1.18
RBM28-207ENST00000488249 BCL2L12Q9HB09 334 aa7.69□□□□□ -1.18
RBM28-207ENST00000488249 TULP1O00294 542 aaPredicted RBP7.68□□□□□ -1.18
RBM28-207ENST00000488249 MAP3K7O43318 606 aa7.67□□□□□ -1.18
RBM28-207ENST00000488249 POTEEQ6S8J3 1075 aa7.67□□□□□ -1.18
RBM28-207ENST00000488249 ARHGAP33O14559 1287 aa7.66□□□□□ -1.18
RBM28-207ENST00000488249 PTPREP23469 700 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms