RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 ZNF687Q8N1G0 1237 aa7.91□□□□□ -1.14
CDC42BPA-213ENST00000488131 PAXIP1Q6ZW49 1069 aaPredicted RBP7.9□□□□□ -1.14
CDC42BPA-213ENST00000488131 CHGAP10645 457 aaKnown RBP7.89□□□□□ -1.15
CDC42BPA-213ENST00000488131 VARS2Q5ST30 1063 aaKnown RBP7.88□□□□□ -1.15
CDC42BPA-213ENST00000488131 TRIM41Q8WV44 630 aa7.88□□□□□ -1.15
CDC42BPA-213ENST00000488131 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.88□□□□□ -1.15
CDC42BPA-213ENST00000488131 CFAP44Q96MT7 982 aa7.87□□□□□ -1.15
CDC42BPA-213ENST00000488131 KDM2AQ9Y2K7 1162 aa7.87□□□□□ -1.15
CDC42BPA-213ENST00000488131 PLA2G2EQ9NZK7 142 aa7.85□□□□□ -1.15
CDC42BPA-213ENST00000488131 ILDR1Q86SU0 546 aaPredicted RBP7.85□□□□□ -1.15
CDC42BPA-213ENST00000488131 ZSWIM6Q9HCJ5 1215 aa7.85□□□□□ -1.15
CDC42BPA-213ENST00000488131 VSIG10Q8N0Z9 540 aa7.84□□□□□ -1.15
CDC42BPA-213ENST00000488131 CABP2Q9NPB3 220 aa7.84□□□□□ -1.15
CDC42BPA-213ENST00000488131 HS6ST3Q8IZP7 471 aa7.83□□□□□ -1.16
CDC42BPA-213ENST00000488131 BOLA1Q9Y3E2 137 aa7.83□□□□□ -1.16
CDC42BPA-213ENST00000488131 SPRYD3Q8NCJ5 442 aa7.82□□□□□ -1.16
CDC42BPA-213ENST00000488131 TSHZ2Q9NRE2 1034 aa7.82□□□□□ -1.16
CDC42BPA-213ENST00000488131 RIOK3O14730 519 aaKnown RBP7.81□□□□□ -1.16
CDC42BPA-213ENST00000488131 NKX1-1Q15270 411 aaPredicted RBP7.8□□□□□ -1.16
CDC42BPA-213ENST00000488131 DNAJC5Q9H3Z4 198 aa7.79□□□□□ -1.16
CDC42BPA-213ENST00000488131 DPY19L2Q6NUT2 758 aa7.78□□□□□ -1.16
CDC42BPA-213ENST00000488131 ANKRD13DQ6ZTN6 518 aa7.78□□□□□ -1.16
CDC42BPA-213ENST00000488131 HCSTQ9UBK5 93 aa7.78□□□□□ -1.16
CDC42BPA-213ENST00000488131 VGFO15240 615 aaPredicted RBP7.74□□□□□ -1.17
CDC42BPA-213ENST00000488131 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-213ENST00000488131 STK25O00506 426 aa7.72□□□□□ -1.17
CDC42BPA-213ENST00000488131 SOX12O15370 315 aa7.72□□□□□ -1.17
CDC42BPA-213ENST00000488131 GTPBP6O43824 516 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-213ENST00000488131 LSM11P83369 360 aaKnown RBP eCLIP7.72□□□□□ -1.17
CDC42BPA-213ENST00000488131 ZFP91Q96JP5 570 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-213ENST00000488131 RGS20O76081 388 aa7.72□□□□□ -1.17
CDC42BPA-213ENST00000488131 GPR153Q6NV75 609 aa7.71□□□□□ -1.18
CDC42BPA-213ENST00000488131 EFCAB3Q8N7B9 438 aa7.71□□□□□ -1.18
CDC42BPA-213ENST00000488131 BCL11BQ9C0K0 894 aaPredicted RBP7.7□□□□□ -1.18
CDC42BPA-213ENST00000488131 TAOK2Q9UL54 1235 aa7.7□□□□□ -1.18
CDC42BPA-213ENST00000488131 MYO15BQ96JP2 1530 aa7.69□□□□□ -1.18
CDC42BPA-213ENST00000488131 PPARGC1BQ86YN6 1023 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-213ENST00000488131 BCANQ96GW7 911 aa7.69□□□□□ -1.18
CDC42BPA-213ENST00000488131 PBX2P40425 430 aa7.68□□□□□ -1.18
CDC42BPA-213ENST00000488131 STK24Q9Y6E0 443 aa7.68□□□□□ -1.18
CDC42BPA-213ENST00000488131 DCAF1Q9Y4B6 1507 aa7.66□□□□□ -1.18
CDC42BPA-213ENST00000488131 ZNF316A6NFI3 1004 aaPredicted RBP7.65□□□□□ -1.18
CDC42BPA-213ENST00000488131 MICALL2Q8IY33 904 aa7.65□□□□□ -1.18
CDC42BPA-213ENST00000488131 IRX2Q9BZI1 471 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-213ENST00000488131 PRKCSHP14314 528 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-213ENST00000488131 CCDC180Q9P1Z9 1646 aa7.63□□□□□ -1.19
CDC42BPA-213ENST00000488131 PCGF6Q9BYE7 350 aa7.62□□□□□ -1.19
CDC42BPA-213ENST00000488131 NLRP6P59044 892 aa7.61□□□□□ -1.19
CDC42BPA-213ENST00000488131 ARSIQ5FYB1 569 aa7.6□□□□□ -1.19
CDC42BPA-213ENST00000488131 TTBK1Q5TCY1 1321 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-213ENST00000488131 PHF8Q9UPP1 1060 aa7.58□□□□□ -1.2
CDC42BPA-213ENST00000488131 TMEM92Q6UXU6 159 aa7.55□□□□□ -1.2
CDC42BPA-213ENST00000488131 IFFO2Q5TF58 517 aa7.55□□□□□ -1.2
CDC42BPA-213ENST00000488131 MS4A4AQ96JQ5 239 aa7.55□□□□□ -1.2
CDC42BPA-213ENST00000488131 MFRPQ9BY79 579 aa7.54□□□□□ -1.2
CDC42BPA-213ENST00000488131 CADPS2Q86UW7 1296 aa7.53□□□□□ -1.2
CDC42BPA-213ENST00000488131 ZEB1P37275 1124 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-213ENST00000488131 RYDENQ9NUL5 291 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-213ENST00000488131 TPRNQ4KMQ1 711 aa7.51□□□□□ -1.21
CDC42BPA-213ENST00000488131 ADGRD1Q6QNK2 874 aa7.51□□□□□ -1.21
CDC42BPA-213ENST00000488131 PPP1R37O75864 691 aa7.5□□□□□ -1.21
CDC42BPA-213ENST00000488131 TK2O00142 265 aa7.49□□□□□ -1.21
CDC42BPA-213ENST00000488131 FBXO22Q8NEZ5 403 aa7.48□□□□□ -1.21
CDC42BPA-213ENST00000488131 POTEEQ6S8J3 1075 aa7.47□□□□□ -1.21
CDC42BPA-213ENST00000488131 KHSRPQ92945 711 aaKnown RBP eCLIP7.47□□□□□ -1.212e-6■■■■□ 25
CDC42BPA-213ENST00000488131 ARHGAP33O14559 1287 aa7.46□□□□□ -1.22
CDC42BPA-213ENST00000488131 AXIN2Q9Y2T1 843 aa7.46□□□□□ -1.22
CDC42BPA-213ENST00000488131 TMC2Q8TDI7 906 aa7.45□□□□□ -1.22
CDC42BPA-213ENST00000488131 PSDA5PKW4 1024 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-213ENST00000488131 TRIM26Q12899 539 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-213ENST00000488131 NBR1Q14596 966 aa7.45□□□□□ -1.22
CDC42BPA-213ENST00000488131 ACIN1Q9UKV3 1341 aaKnown RBP7.44□□□□□ -1.22
CDC42BPA-213ENST00000488131 A0A0G2JS52 829 aa7.44□□□□□ -1.22
CDC42BPA-213ENST00000488131 SLC34A2O95436 690 aa7.44□□□□□ -1.22
CDC42BPA-213ENST00000488131 STAC3Q96MF2 364 aa7.44□□□□□ -1.22
CDC42BPA-213ENST00000488131 C2orf72A6NCS6 295 aa7.43□□□□□ -1.22
CDC42BPA-213ENST00000488131 HRO43593 1189 aa7.43□□□□□ -1.22
CDC42BPA-213ENST00000488131 LHX6Q9UPM6 363 aa7.43□□□□□ -1.22
CDC42BPA-213ENST00000488131 KIF3CO14782 793 aa7.42□□□□□ -1.22
CDC42BPA-213ENST00000488131 KCTD12Q96CX2 325 aaKnown RBP7.42□□□□□ -1.22
CDC42BPA-213ENST00000488131 PCDHGA4Q9Y5G9 962 aa7.42□□□□□ -1.22
CDC42BPA-213ENST00000488131 NUDT7P0C024 238 aa7.41□□□□□ -1.22
CDC42BPA-213ENST00000488131 Q6ZNB5 142 aa7.41□□□□□ -1.22
CDC42BPA-213ENST00000488131 KCNV2Q8TDN2 545 aa7.4□□□□□ -1.23
CDC42BPA-213ENST00000488131 SUPT5HO00267 1087 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-213ENST00000488131 TBC1D12O60347 775 aa7.36□□□□□ -1.23
CDC42BPA-213ENST00000488131 WDR70Q9NW82 654 aa7.36□□□□□ -1.23
CDC42BPA-213ENST00000488131 NCKAP5LQ9HCH0 1330 aa7.35□□□□□ -1.23
CDC42BPA-213ENST00000488131 NEUROD1Q13562 356 aa7.35□□□□□ -1.23
CDC42BPA-213ENST00000488131 KCNH8Q96L42 1107 aa7.34□□□□□ -1.23
CDC42BPA-213ENST00000488131 LAPTM4AQ15012 233 aa7.34□□□□□ -1.23
CDC42BPA-213ENST00000488131 P3H3Q8IVL6 736 aa7.34□□□□□ -1.23
CDC42BPA-213ENST00000488131 SHROOM4Q9ULL8 1493 aa7.33□□□□□ -1.24
CDC42BPA-213ENST00000488131 PTPN5P54829 565 aa7.32□□□□□ -1.24
CDC42BPA-213ENST00000488131 CENPBP07199 599 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-213ENST00000488131 PTCD2Q8WV60 388 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-213ENST00000488131 GTF3C3Q9Y5Q9 886 aa7.32□□□□□ -1.24
CDC42BPA-213ENST00000488131 PPP4R3BQ5MIZ7 849 aa7.31□□□□□ -1.24
CDC42BPA-213ENST00000488131 DMRTA1Q5VZB9 504 aa7.31□□□□□ -1.24
CDC42BPA-213ENST00000488131 CRISPLD2Q9H0B8 497 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms