RNA–Protein interactions for RNA: ENST00000487555.5

PHF19-213, Transcript of PHD finger protein 19, humanhuman

TSL 1 (best)

Gene PHF19, Length 1,092 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF19-213ENST00000487555 ZFYVE16Q7Z3T8 1539 aa24.44■■□□□ 1.5
PHF19-213ENST00000487555 MAGI2Q86UL8 1455 aa24.44■■□□□ 1.5
PHF19-213ENST00000487555 MADDQ8WXG6 1647 aa24.43■■□□□ 1.5
PHF19-213ENST00000487555 CLIP1P30622 1438 aa24.43■■□□□ 1.5
PHF19-213ENST00000487555 YEATS2Q9ULM3 1422 aa24.43■■□□□ 1.5
PHF19-213ENST00000487555 ARID4BQ4LE39 1312 aaPredicted RBP24.41■■□□□ 1.5
PHF19-213ENST00000487555 CCDC18Q5T9S5 1454 aa24.41■■□□□ 1.5
PHF19-213ENST00000487555 SIGLEC1Q9BZZ2 1709 aa24.41■■□□□ 1.5
PHF19-213ENST00000487555 EFCAB2Q5VUJ9 269 aa24.4■■□□□ 1.5
PHF19-213ENST00000487555 ARHGAP5Q13017 1502 aa24.37■■□□□ 1.49
PHF19-213ENST00000487555 FYCO1Q9BQS8 1478 aa24.37■■□□□ 1.49
PHF19-213ENST00000487555 CDC42BPBQ9Y5S2 1711 aa24.35■■□□□ 1.49
PHF19-213ENST00000487555 RIMS1Q86UR5 1692 aaKnown RBP24.33■■□□□ 1.49
PHF19-213ENST00000487555 PREX2Q70Z35 1606 aa24.32■■□□□ 1.48
PHF19-213ENST00000487555 ZNF518AQ6AHZ1 1483 aa24.32■■□□□ 1.48
PHF19-213ENST00000487555 KDM5CP41229 1560 aa24.31■■□□□ 1.48
PHF19-213ENST00000487555 ATP10AO60312 1499 aa24.28■■□□□ 1.48
PHF19-213ENST00000487555 C9orf84Q5VXU9 1444 aa24.27■■□□□ 1.48
PHF19-213ENST00000487555 CDC42BPAQ5VT25 1732 aa24.26■■□□□ 1.47
PHF19-213ENST00000487555 AFAP1Q8N556 730 aa24.25■■□□□ 1.47
PHF19-213ENST00000487555 ABCC1P33527 1531 aa24.25■■□□□ 1.47
PHF19-213ENST00000487555 LMTK3Q96Q04 1460 aa24.23■■□□□ 1.47
PHF19-213ENST00000487555 ARHGEF12Q9NZN5 1544 aa24.23■■□□□ 1.47
PHF19-213ENST00000487555 FER1L4A9Z1Z3 1794 aa24.23■■□□□ 1.47
PHF19-213ENST00000487555 ITSN2Q9NZM3 1697 aa24.21■■□□□ 1.47
PHF19-213ENST00000487555 DIP2CQ9Y2E4 1556 aa24.2■■□□□ 1.47
PHF19-213ENST00000487555 MLECQ14165 292 aa24.2■■□□□ 1.46
PHF19-213ENST00000487555 MLH3Q9UHC1 1453 aa24.19■■□□□ 1.46
PHF19-213ENST00000487555 TRAPPC8Q9Y2L5 1435 aa24.19■■□□□ 1.46
PHF19-213ENST00000487555 REREQ9P2R6 1566 aa24.18■■□□□ 1.46
PHF19-213ENST00000487555 ABCA6Q8N139 1617 aa24.17■■□□□ 1.46
PHF19-213ENST00000487555 ILDR1Q86SU0 546 aaPredicted RBP24.17■■□□□ 1.46
PHF19-213ENST00000487555 GPATCH8Q9UKJ3 1502 aaKnown RBP24.16■■□□□ 1.46
PHF19-213ENST00000487555 SAMD9LQ8IVG5 1584 aa24.14■■□□□ 1.45
PHF19-213ENST00000487555 CEP162Q5TB80 1403 aa24.12■■□□□ 1.45
PHF19-213ENST00000487555 KIDINS220Q9ULH0 1771 aa24.12■■□□□ 1.45
PHF19-213ENST00000487555 MYT1LQ9UL68 1186 aa24.11■■□□□ 1.45
PHF19-213ENST00000487555 PLPPR3Q6T4P5 718 aa24.1■■□□□ 1.45
PHF19-213ENST00000487555 AGLP35573 1532 aa24.09■■□□□ 1.45
PHF19-213ENST00000487555 SYCP2Q9BX26 1530 aa24.09■■□□□ 1.45
PHF19-213ENST00000487555 MTUS2Q5JR59 1369 aa24.08■■□□□ 1.45
PHF19-213ENST00000487555 ZNF777Q9ULD5 760 aaPredicted RBP24.06■■□□□ 1.44
PHF19-213ENST00000487555 EHBP1L1Q8N3D4 1523 aa24.05■■□□□ 1.44
PHF19-213ENST00000487555 CCNB3Q8WWL7 1395 aa24.04■■□□□ 1.44
PHF19-213ENST00000487555 KIAA1107Q9UPP5 1409 aa24.04■■□□□ 1.44
PHF19-213ENST00000487555 HSPA2P54652 639 aa24.03■■□□□ 1.44
PHF19-213ENST00000487555 PLEKHH2Q8IVE3 1493 aa24.02■■□□□ 1.44
PHF19-213ENST00000487555 CFDP1Q9UEE9 299 aaPredicted RBP24.02■■□□□ 1.44
PHF19-213ENST00000487555 TIAM1Q13009 1591 aa24.02■■□□□ 1.44
PHF19-213ENST00000487555 PREX1Q8TCU6 1659 aa24.01■■□□□ 1.43
PHF19-213ENST00000487555 CEBPAP49715 358 aaPredicted RBP24■■□□□ 1.43
PHF19-213ENST00000487555 HNRNPMP52272 730 aaKnown RBP eCLIP24■■□□□ 1.43
PHF19-213ENST00000487555 INO80Q9ULG1 1556 aaPredicted RBP23.99■■□□□ 1.43
PHF19-213ENST00000487555 SPAG9O60271 1321 aaKnown RBP23.98■■□□□ 1.43
PHF19-213ENST00000487555 ATP7AQ04656 1500 aa23.98■■□□□ 1.43
PHF19-213ENST00000487555 SETD1BQ9UPS6 1966 aaKnown RBP23.96■■□□□ 1.43
PHF19-213ENST00000487555 C3P01024 1663 aa23.96■■□□□ 1.43
PHF19-213ENST00000487555 PLXNC1O60486 1568 aa23.93■■□□□ 1.42
PHF19-213ENST00000487555 MBD5Q9P267 1494 aa23.92■■□□□ 1.42
PHF19-213ENST00000487555 ZNF644Q9H582 1327 aaPredicted RBP23.91■■□□□ 1.42
PHF19-213ENST00000487555 CNTLNQ9NXG0 1405 aa23.91■■□□□ 1.42
PHF19-213ENST00000487555 SUPT6HQ7KZ85 1726 aaKnown RBP23.9■■□□□ 1.42
PHF19-213ENST00000487555 UHRF1BP1Q6BDS2 1440 aa23.9■■□□□ 1.42
PHF19-213ENST00000487555 LOC105371045A0A1W2PR82 267 aa23.89■■□□□ 1.41
PHF19-213ENST00000487555 A2MP01023 1474 aa23.88■■□□□ 1.41
PHF19-213ENST00000487555 NCOA2Q15596 1464 aa23.88■■□□□ 1.41
PHF19-213ENST00000487555 VPS8Q8N3P4 1428 aa23.88■■□□□ 1.41
PHF19-213ENST00000487555 ESF1Q9H501 851 aaKnown RBP23.88■■□□□ 1.41
PHF19-213ENST00000487555 MROH2AA6NES4 1674 aa23.87■■□□□ 1.41
PHF19-213ENST00000487555 FBXO41Q8TF61 875 aa23.86■■□□□ 1.41
PHF19-213ENST00000487555 ADGBQ8N7X0 1667 aa23.85■■□□□ 1.41
PHF19-213ENST00000487555 STRCQ7RTU9 1775 aa23.83■■□□□ 1.41
PHF19-213ENST00000487555 RTEL1-TNFRSF6BF6WH68 1400 aa23.82■■□□□ 1.4
PHF19-213ENST00000487555 CAMSAP2Q08AD1 1489 aa23.81■■□□□ 1.4
PHF19-213ENST00000487555 LRRC9Q6ZRR7 1453 aa23.8■■□□□ 1.4
PHF19-213ENST00000487555 NPATQ14207 1427 aa23.79■■□□□ 1.4
PHF19-213ENST00000487555 CCDC141Q6ZP82 1450 aa23.79■■□□□ 1.4
PHF19-213ENST00000487555 CLTCQ00610 1675 aaKnown RBP23.79■■□□□ 1.4
PHF19-213ENST00000487555 ZMYM3Q14202 1370 aa23.78■■□□□ 1.4
PHF19-213ENST00000487555 MAP3K1Q13233 1512 aa23.76■■□□□ 1.39
PHF19-213ENST00000487555 DHX29Q7Z478 1369 aaKnown RBP23.74■■□□□ 1.39
PHF19-213ENST00000487555 ARHGEF5Q12774 1597 aa23.74■■□□□ 1.39
PHF19-213ENST00000487555 GGT6Q6P531 493 aa23.73■■□□□ 1.39
PHF19-213ENST00000487555 RSPH4AQ5TD94 716 aa23.72■■□□□ 1.39
PHF19-213ENST00000487555 DMRT2Q9Y5R5 561 aa23.72■■□□□ 1.39
PHF19-213ENST00000487555 PPP6R1Q9UPN7 881 aa23.71■■□□□ 1.39
PHF19-213ENST00000487555 PTPRKQ15262 1439 aa23.7■■□□□ 1.38
PHF19-213ENST00000487555 KANK4Q5T7N3 995 aaPredicted RBP23.7■■□□□ 1.38
PHF19-213ENST00000487555 NCOA1Q15788 1441 aa23.69■■□□□ 1.38
PHF19-213ENST00000487555 CERKQ8TCT0 537 aa23.69■■□□□ 1.38
PHF19-213ENST00000487555 PTPRTO14522 1441 aa23.68■■□□□ 1.38
PHF19-213ENST00000487555 MYO3AQ8NEV4 1616 aa23.68■■□□□ 1.38
PHF19-213ENST00000487555 ZNF142P52746 1687 aaPredicted RBP23.67■■□□□ 1.38
PHF19-213ENST00000487555 CAMSAP1Q5T5Y3 1602 aa23.65■■□□□ 1.38
PHF19-213ENST00000487555 FAM135AQ9P2D6 1515 aa23.64■■□□□ 1.37
PHF19-213ENST00000487555 MYOM3Q5VTT5 1437 aa23.63■■□□□ 1.37
PHF19-213ENST00000487555 CEP170BQ9Y4F5 1589 aaPredicted RBP23.63■■□□□ 1.37
PHF19-213ENST00000487555 MAST1Q9Y2H9 1570 aa23.62■■□□□ 1.37
PHF19-213ENST00000487555 MIA2Q96PC5 1412 aa23.62■■□□□ 1.37
PHF19-213ENST00000487555 KIF3BO15066 747 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms