RNA–Protein interactions for RNA: ENST00000487309.3

RN7SL397P-201, Transcript of RNA, 7SL, cytoplasmic 397, pseudogene, humanhuman

BASIC

Gene RN7SL397P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL397P-201ENST00000487309 ARID4BQ4LE39 1312 aaPredicted RBP15.74■□□□□ 0.11
RN7SL397P-201ENST00000487309 TROQ12816 1431 aaPredicted RBP15.73■□□□□ 0.11
RN7SL397P-201ENST00000487309 POGZQ7Z3K3 1410 aa15.73■□□□□ 0.11
RN7SL397P-201ENST00000487309 SCAPERQ9BY12 1400 aa15.72■□□□□ 0.11
RN7SL397P-201ENST00000487309 CDC42BPBQ9Y5S2 1711 aa15.71■□□□□ 0.11
RN7SL397P-201ENST00000487309 ILDR1Q86SU0 546 aaPredicted RBP15.69■□□□□ 0.1
RN7SL397P-201ENST00000487309 ARHGAP5Q13017 1502 aa15.68■□□□□ 0.1
RN7SL397P-201ENST00000487309 CASKIN1Q8WXD9 1431 aa15.68■□□□□ 0.1
RN7SL397P-201ENST00000487309 FER1L4A9Z1Z3 1794 aa15.67■□□□□ 0.1
RN7SL397P-201ENST00000487309 MAGI2Q86UL8 1455 aa15.67■□□□□ 0.1
RN7SL397P-201ENST00000487309 CDK11AQ9UQ88 783 aaPredicted RBP15.67■□□□□ 0.1
RN7SL397P-201ENST00000487309 PREX2Q70Z35 1606 aa15.66■□□□□ 0.1
RN7SL397P-201ENST00000487309 CLIP1P30622 1438 aa15.66■□□□□ 0.1
RN7SL397P-201ENST00000487309 CDC42BPAQ5VT25 1732 aa15.65■□□□□ 0.1
RN7SL397P-201ENST00000487309 EFCAB2Q5VUJ9 269 aa15.65■□□□□ 0.1
RN7SL397P-201ENST00000487309 LMTK3Q96Q04 1460 aa15.65■□□□□ 0.1
RN7SL397P-201ENST00000487309 KDM5CP41229 1560 aa15.64■□□□□ 0.09
RN7SL397P-201ENST00000487309 CCDC18Q5T9S5 1454 aa15.64■□□□□ 0.09
RN7SL397P-201ENST00000487309 MLECQ14165 292 aa15.63■□□□□ 0.09
RN7SL397P-201ENST00000487309 PLPPR3Q6T4P5 718 aa15.63■□□□□ 0.09
RN7SL397P-201ENST00000487309 FYCO1Q9BQS8 1478 aa15.63■□□□□ 0.09
RN7SL397P-201ENST00000487309 ZNF518AQ6AHZ1 1483 aa15.62■□□□□ 0.09
RN7SL397P-201ENST00000487309 ARHGEF12Q9NZN5 1544 aa15.62■□□□□ 0.09
RN7SL397P-201ENST00000487309 ITSN2Q9NZM3 1697 aa15.61■□□□□ 0.09
RN7SL397P-201ENST00000487309 ATP10AO60312 1499 aa15.61■□□□□ 0.09
RN7SL397P-201ENST00000487309 AFAP1Q8N556 730 aa15.61■□□□□ 0.09
RN7SL397P-201ENST00000487309 ABCC1P33527 1531 aa15.61■□□□□ 0.09
RN7SL397P-201ENST00000487309 DIP2CQ9Y2E4 1556 aa15.61■□□□□ 0.09
RN7SL397P-201ENST00000487309 ABCA6Q8N139 1617 aa15.61■□□□□ 0.09
RN7SL397P-201ENST00000487309 C9orf84Q5VXU9 1444 aa15.6■□□□□ 0.09
RN7SL397P-201ENST00000487309 TRAPPC8Q9Y2L5 1435 aa15.59■□□□□ 0.09
RN7SL397P-201ENST00000487309 KIDINS220Q9ULH0 1771 aa15.57■□□□□ 0.08
RN7SL397P-201ENST00000487309 HSPA2P54652 639 aa15.56■□□□□ 0.08
RN7SL397P-201ENST00000487309 SAMD9LQ8IVG5 1584 aa15.55■□□□□ 0.08
RN7SL397P-201ENST00000487309 MLH3Q9UHC1 1453 aa15.53■□□□□ 0.08
RN7SL397P-201ENST00000487309 REREQ9P2R6 1566 aa15.53■□□□□ 0.08
RN7SL397P-201ENST00000487309 SYCP2Q9BX26 1530 aa15.53■□□□□ 0.08
RN7SL397P-201ENST00000487309 GPATCH8Q9UKJ3 1502 aaKnown RBP15.53■□□□□ 0.08
RN7SL397P-201ENST00000487309 CEBPAP49715 358 aaPredicted RBP15.52■□□□□ 0.08
RN7SL397P-201ENST00000487309 MYT1LQ9UL68 1186 aa15.51■□□□□ 0.07
RN7SL397P-201ENST00000487309 SETD1BQ9UPS6 1966 aaKnown RBP15.51■□□□□ 0.07
RN7SL397P-201ENST00000487309 PREX1Q8TCU6 1659 aa15.51■□□□□ 0.07
RN7SL397P-201ENST00000487309 C3P01024 1663 aa15.49■□□□□ 0.07
RN7SL397P-201ENST00000487309 ZNF777Q9ULD5 760 aaPredicted RBP15.49■□□□□ 0.07
RN7SL397P-201ENST00000487309 CEP162Q5TB80 1403 aa15.48■□□□□ 0.07
RN7SL397P-201ENST00000487309 AGLP35573 1532 aa15.47■□□□□ 0.07
RN7SL397P-201ENST00000487309 SUPT6HQ7KZ85 1726 aaKnown RBP15.46■□□□□ 0.07
RN7SL397P-201ENST00000487309 TIAM1Q13009 1591 aa15.45■□□□□ 0.06
RN7SL397P-201ENST00000487309 HNRNPMP52272 730 aaKnown RBP eCLIP15.45■□□□□ 0.06
RN7SL397P-201ENST00000487309 MTUS2Q5JR59 1369 aa15.45■□□□□ 0.06
RN7SL397P-201ENST00000487309 INO80Q9ULG1 1556 aaPredicted RBP15.45■□□□□ 0.06
RN7SL397P-201ENST00000487309 STRCQ7RTU9 1775 aa15.44■□□□□ 0.06
RN7SL397P-201ENST00000487309 CCNB3Q8WWL7 1395 aa15.43■□□□□ 0.06
RN7SL397P-201ENST00000487309 ATP7AQ04656 1500 aa15.43■□□□□ 0.06
RN7SL397P-201ENST00000487309 EHBP1L1Q8N3D4 1523 aa15.43■□□□□ 0.06
RN7SL397P-201ENST00000487309 ZNF644Q9H582 1327 aaPredicted RBP15.42■□□□□ 0.06
RN7SL397P-201ENST00000487309 CFDP1Q9UEE9 299 aaPredicted RBP15.41■□□□□ 0.06
RN7SL397P-201ENST00000487309 KIAA1107Q9UPP5 1409 aa15.41■□□□□ 0.06
RN7SL397P-201ENST00000487309 SPAG9O60271 1321 aaKnown RBP15.41■□□□□ 0.06
RN7SL397P-201ENST00000487309 PLXNC1O60486 1568 aa15.41■□□□□ 0.06
RN7SL397P-201ENST00000487309 FBXO41Q8TF61 875 aa15.4■□□□□ 0.06
RN7SL397P-201ENST00000487309 PLEKHH2Q8IVE3 1493 aa15.39■□□□□ 0.05
RN7SL397P-201ENST00000487309 UHRF1BP1Q6BDS2 1440 aa15.38■□□□□ 0.05
RN7SL397P-201ENST00000487309 MROH2AA6NES4 1674 aa15.38■□□□□ 0.05
RN7SL397P-201ENST00000487309 CLTCQ00610 1675 aaKnown RBP15.38■□□□□ 0.05
RN7SL397P-201ENST00000487309 LOC105371045A0A1W2PR82 267 aa15.37■□□□□ 0.05
RN7SL397P-201ENST00000487309 MBD5Q9P267 1494 aa15.36■□□□□ 0.05
RN7SL397P-201ENST00000487309 ADGBQ8N7X0 1667 aa15.35■□□□□ 0.05
RN7SL397P-201ENST00000487309 A2MP01023 1474 aa15.35■□□□□ 0.05
RN7SL397P-201ENST00000487309 NCOA2Q15596 1464 aa15.34■□□□□ 0.05
RN7SL397P-201ENST00000487309 CNTLNQ9NXG0 1405 aa15.34■□□□□ 0.05
RN7SL397P-201ENST00000487309 ESF1Q9H501 851 aaKnown RBP15.33■□□□□ 0.04
RN7SL397P-201ENST00000487309 CAMSAP2Q08AD1 1489 aa15.31■□□□□ 0.04
RN7SL397P-201ENST00000487309 ZMYM3Q14202 1370 aa15.3■□□□□ 0.04
RN7SL397P-201ENST00000487309 VPS8Q8N3P4 1428 aa15.29■□□□□ 0.04
RN7SL397P-201ENST00000487309 CERKQ8TCT0 537 aa15.29■□□□□ 0.04
RN7SL397P-201ENST00000487309 MYO3AQ8NEV4 1616 aa15.28■□□□□ 0.04
RN7SL397P-201ENST00000487309 GGT6Q6P531 493 aa15.28■□□□□ 0.04
RN7SL397P-201ENST00000487309 CCDC141Q6ZP82 1450 aa15.27■□□□□ 0.04
RN7SL397P-201ENST00000487309 NPATQ14207 1427 aa15.27■□□□□ 0.04
RN7SL397P-201ENST00000487309 ZNF142P52746 1687 aaPredicted RBP15.27■□□□□ 0.03
RN7SL397P-201ENST00000487309 LRRC9Q6ZRR7 1453 aa15.27■□□□□ 0.03
RN7SL397P-201ENST00000487309 PTPRKQ15262 1439 aa15.26■□□□□ 0.03
RN7SL397P-201ENST00000487309 NCOA1Q15788 1441 aa15.26■□□□□ 0.03
RN7SL397P-201ENST00000487309 CAMSAP1Q5T5Y3 1602 aa15.26■□□□□ 0.03
RN7SL397P-201ENST00000487309 RTEL1-TNFRSF6BF6WH68 1400 aa15.26■□□□□ 0.03
RN7SL397P-201ENST00000487309 KANK4Q5T7N3 995 aaPredicted RBP15.24■□□□□ 0.03
RN7SL397P-201ENST00000487309 ARHGEF5Q12774 1597 aa15.24■□□□□ 0.03
RN7SL397P-201ENST00000487309 PTPRTO14522 1441 aa15.23■□□□□ 0.03
RN7SL397P-201ENST00000487309 CEP170BQ9Y4F5 1589 aaPredicted RBP15.23■□□□□ 0.03
RN7SL397P-201ENST00000487309 DHX29Q7Z478 1369 aaKnown RBP15.23■□□□□ 0.03
RN7SL397P-201ENST00000487309 LTBP4Q8N2S1 1624 aa15.21■□□□□ 0.03
RN7SL397P-201ENST00000487309 DMRT2Q9Y5R5 561 aa15.21■□□□□ 0.03
RN7SL397P-201ENST00000487309 NCKAP5LQ9HCH0 1330 aa15.19■□□□□ 0.02
RN7SL397P-201ENST00000487309 KIF3BO15066 747 aa15.19■□□□□ 0.02
RN7SL397P-201ENST00000487309 CFAP65Q6ZU64 1925 aaKnown RBP15.19■□□□□ 0.02
RN7SL397P-201ENST00000487309 MAP3K1Q13233 1512 aa15.18■□□□□ 0.02
RN7SL397P-201ENST00000487309 KDM5DQ9BY66 1539 aa15.17■□□□□ 0.02
RN7SL397P-201ENST00000487309 FBXO31Q5XUX0 539 aaPredicted RBP15.17■□□□□ 0.02
RN7SL397P-201ENST00000487309 DNMT1P26358 1616 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms