RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 BCORL1Q5H9F3 1711 aa39.91■■■■□ 3.98
LIME1-206ENST00000487026 ZMYM4Q5VZL5 1548 aa39.9■■■■□ 3.98
LIME1-206ENST00000487026 PTPRMP28827 1452 aa39.89■■■■□ 3.98
LIME1-206ENST00000487026 POGZQ7Z3K3 1410 aa39.88■■■■□ 3.97
LIME1-206ENST00000487026 ZFYVE16Q7Z3T8 1539 aa39.86■■■■□ 3.97
LIME1-206ENST00000487026 CCDC18Q5T9S5 1454 aa39.83■■■■□ 3.97
LIME1-206ENST00000487026 MADDQ8WXG6 1647 aa39.83■■■■□ 3.97
LIME1-206ENST00000487026 MAGI2Q86UL8 1455 aa39.82■■■■□ 3.97
LIME1-206ENST00000487026 ARHGAP5Q13017 1502 aa39.82■■■■□ 3.97
LIME1-206ENST00000487026 FYCO1Q9BQS8 1478 aa39.76■■■■□ 3.96
LIME1-206ENST00000487026 SIGLEC1Q9BZZ2 1709 aa39.76■■■■□ 3.96
LIME1-206ENST00000487026 AFAP1Q8N556 730 aa39.75■■■■□ 3.95
LIME1-206ENST00000487026 MLECQ14165 292 aa39.74■■■■□ 3.95
LIME1-206ENST00000487026 CDC42BPBQ9Y5S2 1711 aa39.71■■■■□ 3.95
LIME1-206ENST00000487026 RIMS1Q86UR5 1692 aaKnown RBP39.69■■■■□ 3.94
LIME1-206ENST00000487026 PLPPR3Q6T4P5 718 aa39.68■■■■□ 3.94
LIME1-206ENST00000487026 ATP10AO60312 1499 aa39.68■■■■□ 3.94
LIME1-206ENST00000487026 ZNF518AQ6AHZ1 1483 aa39.67■■■■□ 3.94
LIME1-206ENST00000487026 MYT1LQ9UL68 1186 aa39.66■■■■□ 3.94
LIME1-206ENST00000487026 PREX2Q70Z35 1606 aa39.62■■■■□ 3.93
LIME1-206ENST00000487026 C9orf84Q5VXU9 1444 aa39.59■■■■□ 3.93
LIME1-206ENST00000487026 ARHGEF12Q9NZN5 1544 aa39.58■■■■□ 3.93
LIME1-206ENST00000487026 KDM5CP41229 1560 aa39.58■■■■□ 3.93
LIME1-206ENST00000487026 TRAPPC8Q9Y2L5 1435 aa39.56■■■■□ 3.92
LIME1-206ENST00000487026 ZNF777Q9ULD5 760 aaPredicted RBP39.55■■■■□ 3.92
LIME1-206ENST00000487026 CDC42BPAQ5VT25 1732 aa39.54■■■■□ 3.92
LIME1-206ENST00000487026 ABCC1P33527 1531 aa39.52■■■■□ 3.92
LIME1-206ENST00000487026 ILDR1Q86SU0 546 aaPredicted RBP39.52■■■■□ 3.92
LIME1-206ENST00000487026 CEP162Q5TB80 1403 aa39.48■■■■□ 3.91
LIME1-206ENST00000487026 FER1L4A9Z1Z3 1794 aa39.47■■■■□ 3.91
LIME1-206ENST00000487026 GPATCH8Q9UKJ3 1502 aaKnown RBP39.47■■■■□ 3.91
LIME1-206ENST00000487026 LMTK3Q96Q04 1460 aa39.47■■■■□ 3.91
LIME1-206ENST00000487026 ITSN2Q9NZM3 1697 aa39.46■■■■□ 3.91
LIME1-206ENST00000487026 MLH3Q9UHC1 1453 aa39.46■■■■□ 3.91
LIME1-206ENST00000487026 DIP2CQ9Y2E4 1556 aa39.46■■■■□ 3.91
LIME1-206ENST00000487026 MTUS2Q5JR59 1369 aa39.44■■■■□ 3.9
LIME1-206ENST00000487026 ABCA6Q8N139 1617 aa39.41■■■■□ 3.9
LIME1-206ENST00000487026 HNRNPMP52272 730 aaKnown RBP eCLIP39.4■■■■□ 3.9
LIME1-206ENST00000487026 CCNB3Q8WWL7 1395 aa39.39■■■■□ 3.9
LIME1-206ENST00000487026 HSPA2P54652 639 aa39.39■■■■□ 3.9
LIME1-206ENST00000487026 SAMD9LQ8IVG5 1584 aa39.38■■■■□ 3.9
LIME1-206ENST00000487026 LOC105371045A0A1W2PR82 267 aa39.38■■■■□ 3.89
LIME1-206ENST00000487026 CEBPAP49715 358 aaPredicted RBP39.38■■■■□ 3.89
LIME1-206ENST00000487026 CFDP1Q9UEE9 299 aaPredicted RBP39.38■■■■□ 3.89
LIME1-206ENST00000487026 SYCP2Q9BX26 1530 aa39.33■■■■□ 3.89
LIME1-206ENST00000487026 KIDINS220Q9ULH0 1771 aa39.32■■■■□ 3.89
LIME1-206ENST00000487026 REREQ9P2R6 1566 aa39.32■■■■□ 3.88
LIME1-206ENST00000487026 SPAG9O60271 1321 aaKnown RBP39.28■■■■□ 3.88
LIME1-206ENST00000487026 KIAA1107Q9UPP5 1409 aa39.23■■■■□ 3.87
LIME1-206ENST00000487026 ZNF644Q9H582 1327 aaPredicted RBP39.23■■■■□ 3.87
LIME1-206ENST00000487026 AGLP35573 1532 aa39.23■■■■□ 3.87
LIME1-206ENST00000487026 EHBP1L1Q8N3D4 1523 aa39.23■■■■□ 3.87
LIME1-206ENST00000487026 PLEKHH2Q8IVE3 1493 aa39.2■■■■□ 3.87
LIME1-206ENST00000487026 ESF1Q9H501 851 aaKnown RBP39.19■■■■□ 3.86
LIME1-206ENST00000487026 TIAM1Q13009 1591 aa39.19■■■■□ 3.86
LIME1-206ENST00000487026 ATP7AQ04656 1500 aa39.12■■■■□ 3.85
LIME1-206ENST00000487026 PREX1Q8TCU6 1659 aa39.09■■■■□ 3.85
LIME1-206ENST00000487026 INO80Q9ULG1 1556 aaPredicted RBP39.06■■■■□ 3.84
LIME1-206ENST00000487026 C3P01024 1663 aa39.06■■■■□ 3.84
LIME1-206ENST00000487026 SUPT6HQ7KZ85 1726 aaKnown RBP39.06■■■■□ 3.84
LIME1-206ENST00000487026 NCOA2Q15596 1464 aa39.05■■■■□ 3.84
LIME1-206ENST00000487026 MBD5Q9P267 1494 aa39.05■■■■□ 3.84
LIME1-206ENST00000487026 VPS8Q8N3P4 1428 aa39.04■■■■□ 3.84
LIME1-206ENST00000487026 A2MP01023 1474 aa39.02■■■■□ 3.84
LIME1-206ENST00000487026 UHRF1BP1Q6BDS2 1440 aa39.01■■■■□ 3.84
LIME1-206ENST00000487026 CNTLNQ9NXG0 1405 aa38.99■■■■□ 3.83
LIME1-206ENST00000487026 SETD1BQ9UPS6 1966 aaKnown RBP38.99■■■■□ 3.83
LIME1-206ENST00000487026 FBXO41Q8TF61 875 aa38.98■■■■□ 3.83
LIME1-206ENST00000487026 PLXNC1O60486 1568 aa38.95■■■■□ 3.83
LIME1-206ENST00000487026 GGT6Q6P531 493 aa38.95■■■■□ 3.83
LIME1-206ENST00000487026 ZMYM3Q14202 1370 aa38.92■■■■□ 3.82
LIME1-206ENST00000487026 CAMSAP2Q08AD1 1489 aa38.91■■■■□ 3.82
LIME1-206ENST00000487026 LRRC9Q6ZRR7 1453 aa38.91■■■■□ 3.82
LIME1-206ENST00000487026 KANK4Q5T7N3 995 aaPredicted RBP38.9■■■■□ 3.82
LIME1-206ENST00000487026 RTEL1-TNFRSF6BF6WH68 1400 aa38.89■■■■□ 3.82
LIME1-206ENST00000487026 ADGBQ8N7X0 1667 aa38.87■■■■□ 3.81
LIME1-206ENST00000487026 CCDC141Q6ZP82 1450 aa38.84■■■■□ 3.81
LIME1-206ENST00000487026 MROH2AA6NES4 1674 aa38.84■■■■□ 3.81
LIME1-206ENST00000487026 CLTCQ00610 1675 aaKnown RBP38.84■■■■□ 3.81
LIME1-206ENST00000487026 STRCQ7RTU9 1775 aa38.83■■■■□ 3.81
LIME1-206ENST00000487026 RSPH4AQ5TD94 716 aa38.82■■■■□ 3.8
LIME1-206ENST00000487026 DHX29Q7Z478 1369 aaKnown RBP38.82■■■■□ 3.8
LIME1-206ENST00000487026 DMRT2Q9Y5R5 561 aa38.79■■■■□ 3.8
LIME1-206ENST00000487026 NPATQ14207 1427 aa38.78■■■■□ 3.8
LIME1-206ENST00000487026 CERKQ8TCT0 537 aa38.76■■■■□ 3.8
LIME1-206ENST00000487026 MAP3K1Q13233 1512 aa38.75■■■■□ 3.79
LIME1-206ENST00000487026 PPP6R1Q9UPN7 881 aa38.75■■■■□ 3.79
LIME1-206ENST00000487026 KIF3BO15066 747 aa38.74■■■■□ 3.79
LIME1-206ENST00000487026 TSPY4P0CV99 314 aa38.74■■■■□ 3.79
LIME1-206ENST00000487026 TSPY10P0CW01 314 aa38.74■■■■□ 3.79
LIME1-206ENST00000487026 ARHGEF5Q12774 1597 aa38.7■■■■□ 3.79
LIME1-206ENST00000487026 PTPRKQ15262 1439 aa38.7■■■■□ 3.79
LIME1-206ENST00000487026 MYOM3Q5VTT5 1437 aa38.63■■■■□ 3.78
LIME1-206ENST00000487026 NCOA1Q15788 1441 aa38.63■■■■□ 3.77
LIME1-206ENST00000487026 APLP2Q06481 763 aa38.62■■■■□ 3.77
LIME1-206ENST00000487026 PTPRTO14522 1441 aa38.62■■■■□ 3.77
LIME1-206ENST00000487026 CAMSAP1Q5T5Y3 1602 aa38.6■■■■□ 3.77
LIME1-206ENST00000487026 MIA2Q96PC5 1412 aa38.58■■■■□ 3.77
LIME1-206ENST00000487026 NCKAP5LQ9HCH0 1330 aa38.57■■■■□ 3.76
LIME1-206ENST00000487026 WASHC2CQ9Y4E1 1318 aa38.57■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms