RNA–Protein interactions for RNA: ENST00000486967.5

FAM228B-204, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-204ENST00000486967 IFNL1Q8IU54 200 aa11.23□□□□□ -0.61
FAM228B-204ENST00000486967 TOP2BQ02880 1626 aa11.23□□□□□ -0.61
FAM228B-204ENST00000486967 TSPOAP1O95153 1857 aa11.23□□□□□ -0.61
FAM228B-204ENST00000486967 TARBP1Q13395 1621 aaKnown RBP11.22□□□□□ -0.61
FAM228B-204ENST00000486967 KLHL34Q8N239 644 aa11.22□□□□□ -0.61
FAM228B-204ENST00000486967 TOPBP1Q92547 1522 aa11.22□□□□□ -0.61
FAM228B-204ENST00000486967 SNAPC4Q5SXM2 1469 aa11.21□□□□□ -0.61
FAM228B-204ENST00000486967 VASPP50552 380 aaPredicted RBP11.21□□□□□ -0.61
FAM228B-204ENST00000486967 MROH2BQ7Z745 1585 aa11.2□□□□□ -0.62
FAM228B-204ENST00000486967 IER5LQ5T953 404 aa11.2□□□□□ -0.62
FAM228B-204ENST00000486967 TRIM35Q9UPQ4 493 aa11.2□□□□□ -0.62
FAM228B-204ENST00000486967 POTEJP0CG39 1038 aa11.19□□□□□ -0.62
FAM228B-204ENST00000486967 TMEM106CQ9BVX2 250 aa11.18□□□□□ -0.62
FAM228B-204ENST00000486967 MAPKBP1O60336 1514 aa11.18□□□□□ -0.62
FAM228B-204ENST00000486967 PYGBP11216 843 aa11.16□□□□□ -0.62
FAM228B-204ENST00000486967 MAGI1Q96QZ7 1491 aaPredicted RBP11.15□□□□□ -0.62
FAM228B-204ENST00000486967 POTEFA5A3E0 1075 aa11.15□□□□□ -0.62
FAM228B-204ENST00000486967 GSE1Q14687 1217 aa11.14□□□□□ -0.63
FAM228B-204ENST00000486967 COLQQ9Y215 455 aaPredicted RBP11.13□□□□□ -0.63
FAM228B-204ENST00000486967 ABCC8Q09428 1581 aa11.11□□□□□ -0.63
FAM228B-204ENST00000486967 PCF11O94913 1555 aaKnown RBP11.11□□□□□ -0.63
FAM228B-204ENST00000486967 POTEMA6NI47 508 aa11.1□□□□□ -0.63
FAM228B-204ENST00000486967 PLCG2P16885 1265 aa11.08□□□□□ -0.64
FAM228B-204ENST00000486967 CEP170Q5SW79 1584 aa11.07□□□□□ -0.64
FAM228B-204ENST00000486967 PRDM2Q13029 1718 aa11.07□□□□□ -0.64
FAM228B-204ENST00000486967 TDRD9Q8NDG6 1382 aaKnown RBP11.07□□□□□ -0.64
FAM228B-204ENST00000486967 PCDHB8Q9UN66 801 aa11.07□□□□□ -0.64
FAM228B-204ENST00000486967 POTEGQ6S5H5 508 aa11.06□□□□□ -0.64
FAM228B-204ENST00000486967 DNMBPQ6XZF7 1577 aa11.06□□□□□ -0.64
FAM228B-204ENST00000486967 ZNF467Q7Z7K2 595 aaPredicted RBP11.05□□□□□ -0.64
FAM228B-204ENST00000486967 PLSCR2Q9NRY7 297 aa11.05□□□□□ -0.64
FAM228B-204ENST00000486967 COL17A1Q9UMD9 1497 aaPredicted RBP11.05□□□□□ -0.64
FAM228B-204ENST00000486967 WDR97A6NE52 1622 aa11.03□□□□□ -0.64
FAM228B-204ENST00000486967 FAM163AQ96GL9 167 aaPredicted RBP11.03□□□□□ -0.64
FAM228B-204ENST00000486967 POLA1P09884 1462 aaPredicted RBP11.02□□□□□ -0.65
FAM228B-204ENST00000486967 PPRC1Q5VV67 1664 aaKnown RBP11.01□□□□□ -0.65
FAM228B-204ENST00000486967 CHRM1P11229 460 aaPredicted RBP11.01□□□□□ -0.65
FAM228B-204ENST00000486967 GOLGA2Q08379 1002 aa11.01□□□□□ -0.65
FAM228B-204ENST00000486967 SPOCK2Q92563 424 aa11.01□□□□□ -0.65
FAM228B-204ENST00000486967 PTPRMP28827 1452 aa11□□□□□ -0.65
FAM228B-204ENST00000486967 GRIN2BQ13224 1484 aa11□□□□□ -0.65
FAM228B-204ENST00000486967 IRX5P78411 483 aaPredicted RBP11□□□□□ -0.65
FAM228B-204ENST00000486967 OCEL1Q9H607 264 aa11□□□□□ -0.65
FAM228B-204ENST00000486967 RAD54L2Q9Y4B4 1467 aa10.99□□□□□ -0.65
FAM228B-204ENST00000486967 SHROOM2Q13796 1616 aa10.98□□□□□ -0.65
FAM228B-204ENST00000486967 SLAIN1Q8ND83 568 aa10.97□□□□□ -0.65
FAM228B-204ENST00000486967 PCDH10Q9P2E7 1040 aa10.97□□□□□ -0.65
FAM228B-204ENST00000486967 IFNLR1Q8IU57 520 aaPredicted RBP10.96□□□□□ -0.65
FAM228B-204ENST00000486967 CIZ1Q9ULV3 898 aaPredicted RBP10.96□□□□□ -0.65
FAM228B-204ENST00000486967 HSPA2P54652 639 aa10.95□□□□□ -0.66
FAM228B-204ENST00000486967 MKRN3Q13064 507 aaKnown RBP10.94□□□□□ -0.66
FAM228B-204ENST00000486967 SOGA1O94964 1423 aa10.93□□□□□ -0.66
FAM228B-204ENST00000486967 ADCY10Q96PN6 1610 aa10.93□□□□□ -0.66
FAM228B-204ENST00000486967 MED1Q15648 1581 aaPredicted RBP10.93□□□□□ -0.66
FAM228B-204ENST00000486967 PSEN1P49768 467 aa10.92□□□□□ -0.66
FAM228B-204ENST00000486967 LCE2DQ5TA82 110 aaPredicted RBP10.92□□□□□ -0.66
FAM228B-204ENST00000486967 WIZO95785 1651 aa10.91□□□□□ -0.66
FAM228B-204ENST00000486967 ADAMTSL3P82987 1691 aa10.89□□□□□ -0.67
FAM228B-204ENST00000486967 PDAP1Q13442 181 aaKnown RBP10.89□□□□□ -0.67
FAM228B-204ENST00000486967 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.89□□□□□ -0.67
FAM228B-204ENST00000486967 NUP160Q12769 1436 aa10.89□□□□□ -0.67
FAM228B-204ENST00000486967 GLI2P10070 1586 aa10.89□□□□□ -0.67
FAM228B-204ENST00000486967 KIF21BO75037 1637 aa10.87□□□□□ -0.67
FAM228B-204ENST00000486967 PRG4Q92954 1404 aaPredicted RBP10.87□□□□□ -0.67
FAM228B-204ENST00000486967 GRIN2AQ12879 1464 aa10.86□□□□□ -0.67
FAM228B-204ENST00000486967 SRCAPQ6ZRS2 3230 aa10.85□□□□□ -0.67
FAM228B-204ENST00000486967 L3MBTL3Q96JM7 780 aaPredicted RBP10.85□□□□□ -0.67
FAM228B-204ENST00000486967 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.85□□□□□ -0.67
FAM228B-204ENST00000486967 TEX14Q8IWB6 1497 aa10.85□□□□□ -0.67
FAM228B-204ENST00000486967 PBRM1Q86U86 1689 aa10.85□□□□□ -0.67
FAM228B-204ENST00000486967 SNPHO15079 494 aa10.84□□□□□ -0.67
FAM228B-204ENST00000486967 C3orf67Q6ZVT6 689 aa10.84□□□□□ -0.67
FAM228B-204ENST00000486967 PDCD7Q8N8D1 485 aaKnown RBP10.84□□□□□ -0.67
FAM228B-204ENST00000486967 IQSEC2Q5JU85 1478 aa10.84□□□□□ -0.67
FAM228B-204ENST00000486967 ST18O60284 1047 aa10.8□□□□□ -0.68
FAM228B-204ENST00000486967 CABP2Q9NPB3 220 aa10.79□□□□□ -0.68
FAM228B-204ENST00000486967 MAP3K4Q9Y6R4 1608 aa10.77□□□□□ -0.68
FAM228B-204ENST00000486967 G3V3G9 751 aa10.77□□□□□ -0.69
FAM228B-204ENST00000486967 PLB1Q6P1J6 1458 aa10.76□□□□□ -0.69
FAM228B-204ENST00000486967 TMEM121BQ9BXQ6 578 aaPredicted RBP10.76□□□□□ -0.69
FAM228B-204ENST00000486967 MADDQ8WXG6 1647 aa10.76□□□□□ -0.69
FAM228B-204ENST00000486967 JPH4Q96JJ6 628 aa10.75□□□□□ -0.69
FAM228B-204ENST00000486967 ASXL2Q76L83 1435 aa10.75□□□□□ -0.69
FAM228B-204ENST00000486967 FGD5Q6ZNL6 1462 aa10.74□□□□□ -0.69
FAM228B-204ENST00000486967 CDAN1Q8IWY9 1227 aa10.74□□□□□ -0.69
FAM228B-204ENST00000486967 YEATS2Q9ULM3 1422 aa10.74□□□□□ -0.69
FAM228B-204ENST00000486967 KIAA0586Q9BVV6 1533 aa10.74□□□□□ -0.69
FAM228B-204ENST00000486967 LTBP4Q8N2S1 1624 aa10.73□□□□□ -0.69
FAM228B-204ENST00000486967 IFFO2Q5TF58 517 aa10.72□□□□□ -0.69
FAM228B-204ENST00000486967 BCORL1Q5H9F3 1711 aa10.72□□□□□ -0.69
FAM228B-204ENST00000486967 TOP2AP11388 1531 aaKnown RBP10.7□□□□□ -0.7
FAM228B-204ENST00000486967 UBAP1LF5GYI3 381 aa10.7□□□□□ -0.7
FAM228B-204ENST00000486967 STRCQ7RTU9 1775 aa10.69□□□□□ -0.7
FAM228B-204ENST00000486967 PTPRTO14522 1441 aa10.68□□□□□ -0.7
FAM228B-204ENST00000486967 BOLA1Q9Y3E2 137 aa10.68□□□□□ -0.7
FAM228B-204ENST00000486967 RIMS1Q86UR5 1692 aaKnown RBP10.68□□□□□ -0.7
FAM228B-204ENST00000486967 ADAMTS12P58397 1594 aa10.68□□□□□ -0.7
FAM228B-204ENST00000486967 EPRSP07814 1512 aaKnown RBP10.68□□□□□ -0.7
FAM228B-204ENST00000486967 ABCA5Q8WWZ7 1642 aa10.67□□□□□ -0.7
FAM228B-204ENST00000486967 HSPA1LP34931 641 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms