RNA–Protein interactions for RNA: ENST00000486946.1

AGAP3-220, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 3

Gene AGAP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-220ENST00000486946 ARHGEF12Q9NZN5 1544 aa19.92■□□□□ 0.78
AGAP3-220ENST00000486946 CFAP74Q9C0B2 1584 aa19.91■□□□□ 0.78
AGAP3-220ENST00000486946 IQSEC2Q5JU85 1478 aa19.91■□□□□ 0.78
AGAP3-220ENST00000486946 RAPGEF6Q8TEU7 1601 aa19.9■□□□□ 0.78
AGAP3-220ENST00000486946 LTBP4Q8N2S1 1624 aa19.88■□□□□ 0.77
AGAP3-220ENST00000486946 PLEKHD1A6NEE1 506 aa19.88■□□□□ 0.77
AGAP3-220ENST00000486946 HECW1Q76N89 1606 aa19.87■□□□□ 0.77
AGAP3-220ENST00000486946 SETD1BQ9UPS6 1966 aaKnown RBP19.87■□□□□ 0.77
AGAP3-220ENST00000486946 ATP10AO60312 1499 aa19.85■□□□□ 0.77
AGAP3-220ENST00000486946 NUP153P49790 1475 aaKnown RBP19.84■□□□□ 0.77
AGAP3-220ENST00000486946 C9orf84Q5VXU9 1444 aa19.83■□□□□ 0.76
AGAP3-220ENST00000486946 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.81■□□□□ 0.76
AGAP3-220ENST00000486946 SCAPERQ9BY12 1400 aa19.81■□□□□ 0.76
AGAP3-220ENST00000486946 UBAP1LF5GYI3 381 aa19.79■□□□□ 0.76
AGAP3-220ENST00000486946 SAMD9Q5K651 1589 aa19.78■□□□□ 0.76
AGAP3-220ENST00000486946 NCOA1Q15788 1441 aa19.73■□□□□ 0.75
AGAP3-220ENST00000486946 PLCH2O75038 1416 aa19.71■□□□□ 0.75
AGAP3-220ENST00000486946 TRAPPC8Q9Y2L5 1435 aa19.7■□□□□ 0.74
AGAP3-220ENST00000486946 ESF1Q9H501 851 aaKnown RBP19.69■□□□□ 0.74
AGAP3-220ENST00000486946 CSRNP3Q8WYN3 585 aa19.68■□□□□ 0.74
AGAP3-220ENST00000486946 C3P01024 1663 aa19.68■□□□□ 0.74
AGAP3-220ENST00000486946 ZNF335Q9H4Z2 1342 aaPredicted RBP19.67■□□□□ 0.74
AGAP3-220ENST00000486946 MED1Q15648 1581 aaPredicted RBP19.66■□□□□ 0.74
AGAP3-220ENST00000486946 EFCAB2Q5VUJ9 269 aa19.66■□□□□ 0.74
AGAP3-220ENST00000486946 MYT1LQ9UL68 1186 aa19.65■□□□□ 0.74
AGAP3-220ENST00000486946 ZNF518AQ6AHZ1 1483 aa19.63■□□□□ 0.73
AGAP3-220ENST00000486946 RANGAP1P46060 587 aaPredicted RBP19.63■□□□□ 0.73
AGAP3-220ENST00000486946 HSPA1LP34931 641 aa19.62■□□□□ 0.73
AGAP3-220ENST00000486946 CAMSAP1Q5T5Y3 1602 aa19.62■□□□□ 0.73
AGAP3-220ENST00000486946 NCKAP5LQ9HCH0 1330 aa19.61■□□□□ 0.73
AGAP3-220ENST00000486946 AFAP1Q8N556 730 aa19.61■□□□□ 0.73
AGAP3-220ENST00000486946 SCAF1Q9H7N4 1312 aaKnown RBP19.59■□□□□ 0.73
AGAP3-220ENST00000486946 REREQ9P2R6 1566 aa19.58■□□□□ 0.73
AGAP3-220ENST00000486946 DIP2CQ9Y2E4 1556 aa19.58■□□□□ 0.73
AGAP3-220ENST00000486946 PHF23Q9BUL5 403 aaPredicted RBP19.58■□□□□ 0.72
AGAP3-220ENST00000486946 EEA1Q15075 1411 aa19.58■□□□□ 0.72
AGAP3-220ENST00000486946 KDM5CP41229 1560 aa19.57■□□□□ 0.72
AGAP3-220ENST00000486946 CNTLNQ9NXG0 1405 aa19.57■□□□□ 0.72
AGAP3-220ENST00000486946 AGLP35573 1532 aa19.56■□□□□ 0.72
AGAP3-220ENST00000486946 CDK13Q14004 1512 aaKnown RBP19.56■□□□□ 0.72
AGAP3-220ENST00000486946 PIP4K2BP78356 416 aa19.55■□□□□ 0.72
AGAP3-220ENST00000486946 PKD2Q13563 968 aa19.55■□□□□ 0.72
AGAP3-220ENST00000486946 MYO5CQ9NQX4 1742 aa19.54■□□□□ 0.72
AGAP3-220ENST00000486946 NPATQ14207 1427 aa19.54■□□□□ 0.72
AGAP3-220ENST00000486946 TOM1O60784 492 aa19.51■□□□□ 0.71
AGAP3-220ENST00000486946 MLH3Q9UHC1 1453 aa19.51■□□□□ 0.71
AGAP3-220ENST00000486946 ABCA6Q8N139 1617 aa19.51■□□□□ 0.71
AGAP3-220ENST00000486946 PLA2R1Q13018 1463 aa19.49■□□□□ 0.71
AGAP3-220ENST00000486946 ARHGAP5Q13017 1502 aa19.49■□□□□ 0.71
AGAP3-220ENST00000486946 PPP6R1Q9UPN7 881 aa19.48■□□□□ 0.71
AGAP3-220ENST00000486946 ZMYM3Q14202 1370 aa19.46■□□□□ 0.71
AGAP3-220ENST00000486946 CDK11AQ9UQ88 783 aaPredicted RBP19.46■□□□□ 0.71
AGAP3-220ENST00000486946 TCOF1Q13428 1488 aaKnown RBP19.46■□□□□ 0.71
AGAP3-220ENST00000486946 MROH2AA6NES4 1674 aa19.43■□□□□ 0.7
AGAP3-220ENST00000486946 ATP1B4Q9UN42 357 aaPredicted RBP19.43■□□□□ 0.7
AGAP3-220ENST00000486946 KIF14Q15058 1648 aa19.42■□□□□ 0.7
AGAP3-220ENST00000486946 ZNF142P52746 1687 aaPredicted RBP19.41■□□□□ 0.7
AGAP3-220ENST00000486946 SUPT6HQ7KZ85 1726 aaKnown RBP19.4■□□□□ 0.7
AGAP3-220ENST00000486946 CPS1P31327 1500 aa19.39■□□□□ 0.69
AGAP3-220ENST00000486946 CEP170BQ9Y4F5 1589 aaPredicted RBP19.39■□□□□ 0.69
AGAP3-220ENST00000486946 MYO3AQ8NEV4 1616 aa19.39■□□□□ 0.69
AGAP3-220ENST00000486946 TROQ12816 1431 aaPredicted RBP19.37■□□□□ 0.69
AGAP3-220ENST00000486946 KIDINS220Q9ULH0 1771 aa19.36■□□□□ 0.69
AGAP3-220ENST00000486946 CLIP1P30622 1438 aa19.35■□□□□ 0.69
AGAP3-220ENST00000486946 PTPRKQ15262 1439 aa19.35■□□□□ 0.69
AGAP3-220ENST00000486946 ABCC1P33527 1531 aa19.34■□□□□ 0.69
AGAP3-220ENST00000486946 SHANK2Q9UPX8 1470 aa19.34■□□□□ 0.69
AGAP3-220ENST00000486946 CDC42BPBQ9Y5S2 1711 aa19.33■□□□□ 0.68
AGAP3-220ENST00000486946 ITSN2Q9NZM3 1697 aa19.31■□□□□ 0.68
AGAP3-220ENST00000486946 CLTCQ00610 1675 aaKnown RBP19.3■□□□□ 0.68
AGAP3-220ENST00000486946 EHMT2Q96KQ7 1210 aa19.3■□□□□ 0.68
AGAP3-220ENST00000486946 SENP3Q9H4L4 574 aaPredicted RBP19.3■□□□□ 0.68
AGAP3-220ENST00000486946 RGS17Q9UGC6 210 aaPredicted RBP19.3■□□□□ 0.68
AGAP3-220ENST00000486946 FMN1Q68DA7 1419 aa19.3■□□□□ 0.68
AGAP3-220ENST00000486946 ARHGAP35Q9NRY4 1499 aa19.29■□□□□ 0.68
AGAP3-220ENST00000486946 A2ML1A8K2U0 1454 aa19.28■□□□□ 0.68
AGAP3-220ENST00000486946 ALKQ9UM73 1620 aa19.27■□□□□ 0.68
AGAP3-220ENST00000486946 UBTFP17480 764 aaKnown RBP19.27■□□□□ 0.68
AGAP3-220ENST00000486946 PREX2Q70Z35 1606 aa19.26■□□□□ 0.67
AGAP3-220ENST00000486946 LRRIQ1Q96JM4 1722 aa19.26■□□□□ 0.67
AGAP3-220ENST00000486946 DNMT1P26358 1616 aaKnown RBP19.25■□□□□ 0.67
AGAP3-220ENST00000486946 GGT6Q6P531 493 aa19.25■□□□□ 0.67
AGAP3-220ENST00000486946 SPAG9O60271 1321 aaKnown RBP19.25■□□□□ 0.67
AGAP3-220ENST00000486946 SAMD9LQ8IVG5 1584 aa19.24■□□□□ 0.67
AGAP3-220ENST00000486946 NEURL4Q96JN8 1562 aa19.23■□□□□ 0.67
AGAP3-220ENST00000486946 POLR1AO95602 1720 aaPredicted RBP19.22■□□□□ 0.67
AGAP3-220ENST00000486946 VWDEQ8N2E2 1590 aa19.21■□□□□ 0.67
AGAP3-220ENST00000486946 ANKLE2Q86XL3 938 aa19.2■□□□□ 0.66
AGAP3-220ENST00000486946 ZNF777Q9ULD5 760 aaPredicted RBP19.19■□□□□ 0.66
AGAP3-220ENST00000486946 A2MP01023 1474 aa19.18■□□□□ 0.66
AGAP3-220ENST00000486946 PLXNC1O60486 1568 aa19.18■□□□□ 0.66
AGAP3-220ENST00000486946 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
AGAP3-220ENST00000486946 HNRNPMP52272 730 aaKnown RBP eCLIP19.16■□□□□ 0.66
AGAP3-220ENST00000486946 POTEAQ6S8J7 498 aa19.16■□□□□ 0.66
AGAP3-220ENST00000486946 ATP7AQ04656 1500 aa19.15■□□□□ 0.66
AGAP3-220ENST00000486946 TNRQ92752 1358 aa19.15■□□□□ 0.66
AGAP3-220ENST00000486946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.14■□□□□ 0.65
AGAP3-220ENST00000486946 NPHP4O75161 1426 aaPredicted RBP19.14■□□□□ 0.65
AGAP3-220ENST00000486946 SYCP2Q9BX26 1530 aa19.14■□□□□ 0.65
AGAP3-220ENST00000486946 CDC42BPAQ5VT25 1732 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms