RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 ZMYM4Q5VZL5 1548 aa30.87■■■□□ 2.53
GMDS-205ENST00000486793 ZFYVE16Q7Z3T8 1539 aa30.86■■■□□ 2.53
GMDS-205ENST00000486793 HECW1Q76N89 1606 aa30.82■■■□□ 2.52
GMDS-205ENST00000486793 LMTK3Q96Q04 1460 aa30.81■■■□□ 2.52
GMDS-205ENST00000486793 TROQ12816 1431 aaPredicted RBP30.79■■■□□ 2.52
GMDS-205ENST00000486793 PCF11O94913 1555 aaKnown RBP30.79■■■□□ 2.52
GMDS-205ENST00000486793 HSPA2P54652 639 aa30.78■■■□□ 2.52
GMDS-205ENST00000486793 AFAP1Q8N556 730 aa30.77■■■□□ 2.52
GMDS-205ENST00000486793 FBXO41Q8TF61 875 aa30.77■■■□□ 2.52
GMDS-205ENST00000486793 RIMS1Q86UR5 1692 aaKnown RBP30.75■■■□□ 2.51
GMDS-205ENST00000486793 ATP10AO60312 1499 aa30.75■■■□□ 2.51
GMDS-205ENST00000486793 CLIP1P30622 1438 aa30.73■■■□□ 2.51
GMDS-205ENST00000486793 SIGLEC1Q9BZZ2 1709 aa30.72■■■□□ 2.51
GMDS-205ENST00000486793 KIF14Q15058 1648 aa30.71■■■□□ 2.51
GMDS-205ENST00000486793 MYT1LQ9UL68 1186 aa30.69■■■□□ 2.5
GMDS-205ENST00000486793 ARHGAP5Q13017 1502 aa30.68■■■□□ 2.5
GMDS-205ENST00000486793 C9orf84Q5VXU9 1444 aa30.67■■■□□ 2.5
GMDS-205ENST00000486793 ZNF518AQ6AHZ1 1483 aa30.65■■■□□ 2.5
GMDS-205ENST00000486793 CEBPAP49715 358 aaPredicted RBP30.64■■■□□ 2.5
GMDS-205ENST00000486793 MYO5CQ9NQX4 1742 aa30.64■■■□□ 2.5
GMDS-205ENST00000486793 CASKIN1Q8WXD9 1431 aa30.64■■■□□ 2.49
GMDS-205ENST00000486793 ARHGEF12Q9NZN5 1544 aa30.6■■■□□ 2.49
GMDS-205ENST00000486793 CCDC18Q5T9S5 1454 aa30.56■■■□□ 2.48
GMDS-205ENST00000486793 KDM5CP41229 1560 aa30.54■■■□□ 2.48
GMDS-205ENST00000486793 TRAPPC8Q9Y2L5 1435 aa30.54■■■□□ 2.48
GMDS-205ENST00000486793 LRRIQ1Q96JM4 1722 aa30.53■■■□□ 2.48
GMDS-205ENST00000486793 MLH3Q9UHC1 1453 aa30.51■■■□□ 2.48
GMDS-205ENST00000486793 FER1L4A9Z1Z3 1794 aa30.5■■■□□ 2.47
GMDS-205ENST00000486793 ZNF777Q9ULD5 760 aaPredicted RBP30.48■■■□□ 2.47
GMDS-205ENST00000486793 DIP2CQ9Y2E4 1556 aa30.45■■■□□ 2.47
GMDS-205ENST00000486793 CDC42BPBQ9Y5S2 1711 aa30.45■■■□□ 2.47
GMDS-205ENST00000486793 FYCO1Q9BQS8 1478 aa30.44■■■□□ 2.46
GMDS-205ENST00000486793 CERKQ8TCT0 537 aa30.43■■■□□ 2.46
GMDS-205ENST00000486793 ESF1Q9H501 851 aaKnown RBP30.43■■■□□ 2.46
GMDS-205ENST00000486793 ABCC1P33527 1531 aa30.42■■■□□ 2.46
GMDS-205ENST00000486793 PREX2Q70Z35 1606 aa30.41■■■□□ 2.46
GMDS-205ENST00000486793 HNRNPMP52272 730 aaKnown RBP eCLIP30.4■■■□□ 2.46
GMDS-205ENST00000486793 REREQ9P2R6 1566 aa30.4■■■□□ 2.46
GMDS-205ENST00000486793 GPATCH8Q9UKJ3 1502 aaKnown RBP30.37■■■□□ 2.45
GMDS-205ENST00000486793 ABCA6Q8N139 1617 aa30.37■■■□□ 2.45
GMDS-205ENST00000486793 DMRT2Q9Y5R5 561 aa30.36■■■□□ 2.45
GMDS-205ENST00000486793 UHRF1BP1Q6BDS2 1440 aa30.36■■■□□ 2.45
GMDS-205ENST00000486793 AGLP35573 1532 aa30.36■■■□□ 2.45
GMDS-205ENST00000486793 CFDP1Q9UEE9 299 aaPredicted RBP30.35■■■□□ 2.45
GMDS-205ENST00000486793 SPAG9O60271 1321 aaKnown RBP30.34■■■□□ 2.45
GMDS-205ENST00000486793 PREX1Q8TCU6 1659 aa30.3■■■□□ 2.44
GMDS-205ENST00000486793 ITSN2Q9NZM3 1697 aa30.3■■■□□ 2.44
GMDS-205ENST00000486793 CCNB3Q8WWL7 1395 aa30.28■■■□□ 2.44
GMDS-205ENST00000486793 SAMD9LQ8IVG5 1584 aa30.28■■■□□ 2.44
GMDS-205ENST00000486793 CDC42BPAQ5VT25 1732 aa30.27■■■□□ 2.44
GMDS-205ENST00000486793 KIDINS220Q9ULH0 1771 aa30.26■■■□□ 2.44
GMDS-205ENST00000486793 MTUS2Q5JR59 1369 aa30.26■■■□□ 2.43
GMDS-205ENST00000486793 KIAA1107Q9UPP5 1409 aa30.25■■■□□ 2.43
GMDS-205ENST00000486793 CNTLNQ9NXG0 1405 aa30.24■■■□□ 2.43
GMDS-205ENST00000486793 SYCP2Q9BX26 1530 aa30.24■■■□□ 2.43
GMDS-205ENST00000486793 ZNF644Q9H582 1327 aaPredicted RBP30.2■■■□□ 2.42
GMDS-205ENST00000486793 PLEKHH2Q8IVE3 1493 aa30.19■■■□□ 2.42
GMDS-205ENST00000486793 SETD1BQ9UPS6 1966 aaKnown RBP30.19■■■□□ 2.42
GMDS-205ENST00000486793 ZMYM3Q14202 1370 aa30.19■■■□□ 2.42
GMDS-205ENST00000486793 C3P01024 1663 aa30.18■■■□□ 2.42
GMDS-205ENST00000486793 STRCQ7RTU9 1775 aa30.15■■■□□ 2.42
GMDS-205ENST00000486793 GGT6Q6P531 493 aa30.15■■■□□ 2.42
GMDS-205ENST00000486793 PTPRTO14522 1441 aa30.14■■■□□ 2.42
GMDS-205ENST00000486793 A2MP01023 1474 aa30.12■■■□□ 2.41
GMDS-205ENST00000486793 ATP7AQ04656 1500 aa30.12■■■□□ 2.41
GMDS-205ENST00000486793 NPATQ14207 1427 aa30.11■■■□□ 2.41
GMDS-205ENST00000486793 NCOA1Q15788 1441 aa30.06■■■□□ 2.4
GMDS-205ENST00000486793 CEP162Q5TB80 1403 aa30.06■■■□□ 2.4
GMDS-205ENST00000486793 MBD5Q9P267 1494 aa30.06■■■□□ 2.4
GMDS-205ENST00000486793 PPP6R1Q9UPN7 881 aa30.05■■■□□ 2.4
GMDS-205ENST00000486793 INO80Q9ULG1 1556 aaPredicted RBP30.04■■■□□ 2.4
GMDS-205ENST00000486793 SUPT6HQ7KZ85 1726 aaKnown RBP30.03■■■□□ 2.4
GMDS-205ENST00000486793 PLXNC1O60486 1568 aa30.03■■■□□ 2.4
GMDS-205ENST00000486793 NCKAP5LQ9HCH0 1330 aa30.02■■■□□ 2.4
GMDS-205ENST00000486793 TIAM1Q13009 1591 aa30.01■■■□□ 2.39
GMDS-205ENST00000486793 EHBP1L1Q8N3D4 1523 aa30.01■■■□□ 2.39
GMDS-205ENST00000486793 PTPRKQ15262 1439 aa29.99■■■□□ 2.39
GMDS-205ENST00000486793 RTEL1-TNFRSF6BF6WH68 1400 aa29.98■■■□□ 2.39
GMDS-205ENST00000486793 DHX29Q7Z478 1369 aaKnown RBP29.98■■■□□ 2.39
GMDS-205ENST00000486793 MROH2AA6NES4 1674 aa29.97■■■□□ 2.39
GMDS-205ENST00000486793 CAMSAP1Q5T5Y3 1602 aa29.96■■■□□ 2.39
GMDS-205ENST00000486793 LTBP4Q8N2S1 1624 aa29.93■■■□□ 2.38
GMDS-205ENST00000486793 KIF3BO15066 747 aa29.93■■■□□ 2.38
GMDS-205ENST00000486793 RSPH4AQ5TD94 716 aa29.93■■■□□ 2.38
GMDS-205ENST00000486793 CLTCQ00610 1675 aaKnown RBP29.92■■■□□ 2.38
GMDS-205ENST00000486793 PKD2Q13563 968 aa29.92■■■□□ 2.38
GMDS-205ENST00000486793 NCOA2Q15596 1464 aa29.92■■■□□ 2.38
GMDS-205ENST00000486793 LOC105371045A0A1W2PR82 267 aa29.89■■■□□ 2.38
GMDS-205ENST00000486793 ZNF335Q9H4Z2 1342 aaPredicted RBP29.88■■■□□ 2.37
GMDS-205ENST00000486793 FBXO31Q5XUX0 539 aaPredicted RBP29.87■■■□□ 2.37
GMDS-205ENST00000486793 CCDC141Q6ZP82 1450 aa29.86■■■□□ 2.37
GMDS-205ENST00000486793 ADGBQ8N7X0 1667 aa29.85■■■□□ 2.37
GMDS-205ENST00000486793 TSPY4P0CV99 314 aa29.84■■■□□ 2.37
GMDS-205ENST00000486793 TSPY10P0CW01 314 aa29.84■■■□□ 2.37
GMDS-205ENST00000486793 CAMSAP2Q08AD1 1489 aa29.84■■■□□ 2.37
GMDS-205ENST00000486793 PLA2R1Q13018 1463 aa29.84■■■□□ 2.37
GMDS-205ENST00000486793 WASHC2CQ9Y4E1 1318 aa29.83■■■□□ 2.37
GMDS-205ENST00000486793 CEP170BQ9Y4F5 1589 aaPredicted RBP29.81■■■□□ 2.36
GMDS-205ENST00000486793 TCOF1Q13428 1488 aaKnown RBP29.81■■■□□ 2.36
GMDS-205ENST00000486793 IQSEC2Q5JU85 1478 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms