RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 YEATS2Q9ULM3 1422 aa34.21■■■■□ 3.07
LMBR1-217ENST00000485985 MAGI2Q86UL8 1455 aa34.2■■■■□ 3.07
LMBR1-217ENST00000485985 POGZQ7Z3K3 1410 aa34.2■■■■□ 3.06
LMBR1-217ENST00000485985 LMTK3Q96Q04 1460 aa34.19■■■■□ 3.06
LMBR1-217ENST00000485985 SCAPERQ9BY12 1400 aa34.18■■■■□ 3.06
LMBR1-217ENST00000485985 SIGLEC1Q9BZZ2 1709 aa34.16■■■■□ 3.06
LMBR1-217ENST00000485985 CDK11AQ9UQ88 783 aaPredicted RBP34.13■■■■□ 3.05
LMBR1-217ENST00000485985 TROQ12816 1431 aaPredicted RBP34.13■■■■□ 3.05
LMBR1-217ENST00000485985 FBXO41Q8TF61 875 aa34.12■■■■□ 3.05
LMBR1-217ENST00000485985 CASKIN1Q8WXD9 1431 aa34.12■■■■□ 3.05
LMBR1-217ENST00000485985 EFCAB2Q5VUJ9 269 aa34.1■■■■□ 3.05
LMBR1-217ENST00000485985 CCDC18Q5T9S5 1454 aa34.07■■■■□ 3.04
LMBR1-217ENST00000485985 MLECQ14165 292 aa34.06■■■■□ 3.04
LMBR1-217ENST00000485985 PLPPR3Q6T4P5 718 aa34.06■■■■□ 3.04
LMBR1-217ENST00000485985 CLIP1P30622 1438 aa34.05■■■■□ 3.04
LMBR1-217ENST00000485985 FYCO1Q9BQS8 1478 aa34.04■■■■□ 3.04
LMBR1-217ENST00000485985 CDC42BPBQ9Y5S2 1711 aa34.04■■■■□ 3.04
LMBR1-217ENST00000485985 ATP10AO60312 1499 aa34.02■■■■□ 3.04
LMBR1-217ENST00000485985 HSPA2P54652 639 aa34.01■■■■□ 3.03
LMBR1-217ENST00000485985 FER1L4A9Z1Z3 1794 aa34■■■■□ 3.03
LMBR1-217ENST00000485985 PREX2Q70Z35 1606 aa33.99■■■■□ 3.03
LMBR1-217ENST00000485985 ARHGAP5Q13017 1502 aa33.99■■■■□ 3.03
LMBR1-217ENST00000485985 C9orf84Q5VXU9 1444 aa33.97■■■■□ 3.03
LMBR1-217ENST00000485985 ARHGEF12Q9NZN5 1544 aa33.94■■■■□ 3.02
LMBR1-217ENST00000485985 CDC42BPAQ5VT25 1732 aa33.94■■■■□ 3.02
LMBR1-217ENST00000485985 ZNF518AQ6AHZ1 1483 aa33.94■■■■□ 3.02
LMBR1-217ENST00000485985 AFAP1Q8N556 730 aa33.91■■■■□ 3.02
LMBR1-217ENST00000485985 KDM5CP41229 1560 aa33.89■■■■□ 3.02
LMBR1-217ENST00000485985 ITSN2Q9NZM3 1697 aa33.85■■■■□ 3.01
LMBR1-217ENST00000485985 ABCC1P33527 1531 aa33.84■■■■□ 3.01
LMBR1-217ENST00000485985 MYT1LQ9UL68 1186 aa33.82■■■■□ 3
LMBR1-217ENST00000485985 CEBPAP49715 358 aaPredicted RBP33.81■■■■□ 3
LMBR1-217ENST00000485985 DIP2CQ9Y2E4 1556 aa33.79■■■■□ 3
LMBR1-217ENST00000485985 PREX1Q8TCU6 1659 aa33.77■■■■□ 3
LMBR1-217ENST00000485985 CEP162Q5TB80 1403 aa33.77■■■■□ 3
LMBR1-217ENST00000485985 MLH3Q9UHC1 1453 aa33.76■■■■□ 3
LMBR1-217ENST00000485985 REREQ9P2R6 1566 aa33.76■■■□□ 2.99
LMBR1-217ENST00000485985 ABCA6Q8N139 1617 aa33.75■■■□□ 2.99
LMBR1-217ENST00000485985 TRAPPC8Q9Y2L5 1435 aa33.73■■■□□ 2.99
LMBR1-217ENST00000485985 SAMD9LQ8IVG5 1584 aa33.72■■■□□ 2.99
LMBR1-217ENST00000485985 CERKQ8TCT0 537 aa33.69■■■□□ 2.98
LMBR1-217ENST00000485985 GPATCH8Q9UKJ3 1502 aaKnown RBP33.67■■■□□ 2.98
LMBR1-217ENST00000485985 SETD1BQ9UPS6 1966 aaKnown RBP33.67■■■□□ 2.98
LMBR1-217ENST00000485985 KIDINS220Q9ULH0 1771 aa33.66■■■□□ 2.98
LMBR1-217ENST00000485985 AGLP35573 1532 aa33.65■■■□□ 2.98
LMBR1-217ENST00000485985 SYCP2Q9BX26 1530 aa33.63■■■□□ 2.97
LMBR1-217ENST00000485985 UHRF1BP1Q6BDS2 1440 aa33.62■■■□□ 2.97
LMBR1-217ENST00000485985 EHBP1L1Q8N3D4 1523 aa33.62■■■□□ 2.97
LMBR1-217ENST00000485985 STRCQ7RTU9 1775 aa33.6■■■□□ 2.97
LMBR1-217ENST00000485985 C3P01024 1663 aa33.59■■■□□ 2.97
LMBR1-217ENST00000485985 ESF1Q9H501 851 aaKnown RBP33.59■■■□□ 2.97
LMBR1-217ENST00000485985 TIAM1Q13009 1591 aa33.59■■■□□ 2.97
LMBR1-217ENST00000485985 MTUS2Q5JR59 1369 aa33.59■■■□□ 2.97
LMBR1-217ENST00000485985 DMRT2Q9Y5R5 561 aa33.58■■■□□ 2.97
LMBR1-217ENST00000485985 ZNF777Q9ULD5 760 aaPredicted RBP33.56■■■□□ 2.96
LMBR1-217ENST00000485985 CCNB3Q8WWL7 1395 aa33.52■■■□□ 2.96
LMBR1-217ENST00000485985 INO80Q9ULG1 1556 aaPredicted RBP33.5■■■□□ 2.95
LMBR1-217ENST00000485985 CNTLNQ9NXG0 1405 aa33.49■■■□□ 2.95
LMBR1-217ENST00000485985 HNRNPMP52272 730 aaKnown RBP eCLIP33.48■■■□□ 2.951e-6■■■■□ 20.7
LMBR1-217ENST00000485985 SPAG9O60271 1321 aaKnown RBP33.47■■■□□ 2.95
LMBR1-217ENST00000485985 PLEKHH2Q8IVE3 1493 aa33.46■■■□□ 2.95
LMBR1-217ENST00000485985 LOC105371045A0A1W2PR82 267 aa33.46■■■□□ 2.95
LMBR1-217ENST00000485985 KIAA1107Q9UPP5 1409 aa33.45■■■□□ 2.95
LMBR1-217ENST00000485985 ATP7AQ04656 1500 aa33.45■■■□□ 2.95
LMBR1-217ENST00000485985 SUPT6HQ7KZ85 1726 aaKnown RBP33.45■■■□□ 2.94
LMBR1-217ENST00000485985 CFDP1Q9UEE9 299 aaPredicted RBP33.44■■■□□ 2.94
LMBR1-217ENST00000485985 PTPRTO14522 1441 aa33.41■■■□□ 2.94
LMBR1-217ENST00000485985 VPS8Q8N3P4 1428 aa33.39■■■□□ 2.94
LMBR1-217ENST00000485985 MROH2AA6NES4 1674 aa33.38■■■□□ 2.93
LMBR1-217ENST00000485985 PLXNC1O60486 1568 aa33.38■■■□□ 2.93
LMBR1-217ENST00000485985 NCOA2Q15596 1464 aa33.37■■■□□ 2.93
LMBR1-217ENST00000485985 ZMYM3Q14202 1370 aa33.35■■■□□ 2.93
LMBR1-217ENST00000485985 NPATQ14207 1427 aa33.35■■■□□ 2.93
LMBR1-217ENST00000485985 ZNF644Q9H582 1327 aaPredicted RBP33.33■■■□□ 2.93
LMBR1-217ENST00000485985 ADGBQ8N7X0 1667 aa33.33■■■□□ 2.93
LMBR1-217ENST00000485985 MBD5Q9P267 1494 aa33.32■■■□□ 2.92
LMBR1-217ENST00000485985 A2MP01023 1474 aa33.31■■■□□ 2.92
LMBR1-217ENST00000485985 NCOA1Q15788 1441 aa33.31■■■□□ 2.92
LMBR1-217ENST00000485985 CLTCQ00610 1675 aaKnown RBP33.27■■■□□ 2.92
LMBR1-217ENST00000485985 CAMSAP2Q08AD1 1489 aa33.27■■■□□ 2.92
LMBR1-217ENST00000485985 LRRC9Q6ZRR7 1453 aa33.25■■■□□ 2.91
LMBR1-217ENST00000485985 CAMSAP1Q5T5Y3 1602 aa33.24■■■□□ 2.91
LMBR1-217ENST00000485985 LTBP4Q8N2S1 1624 aa33.24■■■□□ 2.91
LMBR1-217ENST00000485985 GGT6Q6P531 493 aa33.23■■■□□ 2.91
LMBR1-217ENST00000485985 MAP3K1Q13233 1512 aa33.2■■■□□ 2.91
LMBR1-217ENST00000485985 PPP6R1Q9UPN7 881 aa33.18■■■□□ 2.9
LMBR1-217ENST00000485985 PTPRKQ15262 1439 aa33.18■■■□□ 2.9
LMBR1-217ENST00000485985 CCDC141Q6ZP82 1450 aa33.18■■■□□ 2.9
LMBR1-217ENST00000485985 RTEL1-TNFRSF6BF6WH68 1400 aa33.15■■■□□ 2.9
LMBR1-217ENST00000485985 ARHGEF5Q12774 1597 aa33.15■■■□□ 2.9
LMBR1-217ENST00000485985 MYO3AQ8NEV4 1616 aa33.15■■■□□ 2.9
LMBR1-217ENST00000485985 NCKAP5LQ9HCH0 1330 aa33.15■■■□□ 2.9
LMBR1-217ENST00000485985 ZNF142P52746 1687 aaPredicted RBP33.14■■■□□ 2.9
LMBR1-217ENST00000485985 IQSEC2Q5JU85 1478 aa33.13■■■□□ 2.89
LMBR1-217ENST00000485985 CEP170BQ9Y4F5 1589 aaPredicted RBP33.1■■■□□ 2.89
LMBR1-217ENST00000485985 KANK4Q5T7N3 995 aaPredicted RBP33.09■■■□□ 2.89
LMBR1-217ENST00000485985 PLA2R1Q13018 1463 aa33.09■■■□□ 2.89
LMBR1-217ENST00000485985 DHX29Q7Z478 1369 aaKnown RBP33.09■■■□□ 2.89
LMBR1-217ENST00000485985 PKD2Q13563 968 aa33.08■■■□□ 2.89
LMBR1-217ENST00000485985 DISP3Q9P2K9 1392 aa33.06■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms