RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 ARID4BQ4LE39 1312 aaPredicted RBP16.98■□□□□ 0.31
DDX56-212ENST00000485367 CEP162Q5TB80 1403 aa16.98■□□□□ 0.31
DDX56-212ENST00000485367 ARHGEF40Q8TER5 1519 aa16.97■□□□□ 0.31
DDX56-212ENST00000485367 POGZQ7Z3K3 1410 aa16.96■□□□□ 0.31
DDX56-212ENST00000485367 ZMYM4Q5VZL5 1548 aa16.96■□□□□ 0.31
DDX56-212ENST00000485367 LOC105371045A0A1W2PR82 267 aa16.96■□□□□ 0.31
DDX56-212ENST00000485367 CDC42BPBQ9Y5S2 1711 aa16.94■□□□□ 0.3
DDX56-212ENST00000485367 ZFYVE16Q7Z3T8 1539 aa16.94■□□□□ 0.3
DDX56-212ENST00000485367 YEATS2Q9ULM3 1422 aa16.93■□□□□ 0.3
DDX56-212ENST00000485367 MAGI2Q86UL8 1455 aa16.93■□□□□ 0.3
DDX56-212ENST00000485367 PREX2Q70Z35 1606 aa16.92■□□□□ 0.3
DDX56-212ENST00000485367 ADAMTSL3P82987 1691 aa16.92■□□□□ 0.3
DDX56-212ENST00000485367 BCORL1Q5H9F3 1711 aa16.91■□□□□ 0.3
DDX56-212ENST00000485367 CDC42BPAQ5VT25 1732 aa16.9■□□□□ 0.3
DDX56-212ENST00000485367 AFAP1Q8N556 730 aa16.89■□□□□ 0.3
DDX56-212ENST00000485367 MYT1LQ9UL68 1186 aa16.89■□□□□ 0.29
DDX56-212ENST00000485367 MTUS2Q5JR59 1369 aa16.88■□□□□ 0.29
DDX56-212ENST00000485367 ZNF518AQ6AHZ1 1483 aa16.88■□□□□ 0.29
DDX56-212ENST00000485367 ZNF777Q9ULD5 760 aaPredicted RBP16.87■□□□□ 0.29
DDX56-212ENST00000485367 MADDQ8WXG6 1647 aa16.87■□□□□ 0.29
DDX56-212ENST00000485367 ATP10AO60312 1499 aa16.86■□□□□ 0.29
DDX56-212ENST00000485367 PTPRMP28827 1452 aa16.86■□□□□ 0.29
DDX56-212ENST00000485367 ABCC1P33527 1531 aa16.86■□□□□ 0.29
DDX56-212ENST00000485367 SIGLEC1Q9BZZ2 1709 aa16.86■□□□□ 0.29
DDX56-212ENST00000485367 GPATCH8Q9UKJ3 1502 aaKnown RBP16.85■□□□□ 0.29
DDX56-212ENST00000485367 ARHGEF12Q9NZN5 1544 aa16.85■□□□□ 0.29
DDX56-212ENST00000485367 MLECQ14165 292 aa16.84■□□□□ 0.29
DDX56-212ENST00000485367 ITSN2Q9NZM3 1697 aa16.84■□□□□ 0.29
DDX56-212ENST00000485367 KDM5CP41229 1560 aa16.84■□□□□ 0.29
DDX56-212ENST00000485367 HECW2Q9P2P5 1572 aa16.84■□□□□ 0.29
DDX56-212ENST00000485367 CCNB3Q8WWL7 1395 aa16.84■□□□□ 0.29
DDX56-212ENST00000485367 TRAPPC8Q9Y2L5 1435 aa16.83■□□□□ 0.29
DDX56-212ENST00000485367 C9orf84Q5VXU9 1444 aa16.83■□□□□ 0.28
DDX56-212ENST00000485367 RIMS1Q86UR5 1692 aaKnown RBP16.82■□□□□ 0.28
DDX56-212ENST00000485367 CFDP1Q9UEE9 299 aaPredicted RBP16.82■□□□□ 0.28
DDX56-212ENST00000485367 SAMD9LQ8IVG5 1584 aa16.81■□□□□ 0.28
DDX56-212ENST00000485367 EHBP1L1Q8N3D4 1523 aa16.81■□□□□ 0.28
DDX56-212ENST00000485367 MLH3Q9UHC1 1453 aa16.8■□□□□ 0.28
DDX56-212ENST00000485367 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
DDX56-212ENST00000485367 HNRNPMP52272 730 aaKnown RBP eCLIP16.79■□□□□ 0.28
DDX56-212ENST00000485367 DIP2CQ9Y2E4 1556 aa16.78■□□□□ 0.28
DDX56-212ENST00000485367 VPS8Q8N3P4 1428 aa16.78■□□□□ 0.28
DDX56-212ENST00000485367 SYCP2Q9BX26 1530 aa16.78■□□□□ 0.28
DDX56-212ENST00000485367 ABCA6Q8N139 1617 aa16.77■□□□□ 0.28
DDX56-212ENST00000485367 TIAM1Q13009 1591 aa16.76■□□□□ 0.27
DDX56-212ENST00000485367 FER1L4A9Z1Z3 1794 aa16.76■□□□□ 0.27
DDX56-212ENST00000485367 PLEKHH2Q8IVE3 1493 aa16.76■□□□□ 0.27
DDX56-212ENST00000485367 KIDINS220Q9ULH0 1771 aa16.75■□□□□ 0.27
DDX56-212ENST00000485367 KIAA1107Q9UPP5 1409 aa16.74■□□□□ 0.27
DDX56-212ENST00000485367 SPAG9O60271 1321 aaKnown RBP16.74■□□□□ 0.27
DDX56-212ENST00000485367 SUPT6HQ7KZ85 1726 aaKnown RBP16.73■□□□□ 0.27
DDX56-212ENST00000485367 ZNF644Q9H582 1327 aaPredicted RBP16.73■□□□□ 0.27
DDX56-212ENST00000485367 NCOA2Q15596 1464 aa16.73■□□□□ 0.27
DDX56-212ENST00000485367 REREQ9P2R6 1566 aa16.72■□□□□ 0.27
DDX56-212ENST00000485367 LRRC9Q6ZRR7 1453 aa16.69■□□□□ 0.26
DDX56-212ENST00000485367 AGLP35573 1532 aa16.68■□□□□ 0.26
DDX56-212ENST00000485367 ATP7AQ04656 1500 aa16.68■□□□□ 0.26
DDX56-212ENST00000485367 CEBPAP49715 358 aaPredicted RBP16.66■□□□□ 0.26
DDX56-212ENST00000485367 INO80Q9ULG1 1556 aaPredicted RBP16.66■□□□□ 0.26
DDX56-212ENST00000485367 LMTK3Q96Q04 1460 aa16.66■□□□□ 0.26
DDX56-212ENST00000485367 KANK4Q5T7N3 995 aaPredicted RBP16.66■□□□□ 0.26
DDX56-212ENST00000485367 ESF1Q9H501 851 aaKnown RBP16.66■□□□□ 0.26
DDX56-212ENST00000485367 MBD5Q9P267 1494 aa16.65■□□□□ 0.26
DDX56-212ENST00000485367 MAP3K1Q13233 1512 aa16.65■□□□□ 0.26
DDX56-212ENST00000485367 MYT1Q01538 1121 aa16.64■□□□□ 0.25
DDX56-212ENST00000485367 CAMSAP2Q08AD1 1489 aa16.63■□□□□ 0.25
DDX56-212ENST00000485367 APLP2Q06481 763 aa16.63■□□□□ 0.25
DDX56-212ENST00000485367 A2MP01023 1474 aa16.62■□□□□ 0.25
DDX56-212ENST00000485367 HSPA2P54652 639 aa16.62■□□□□ 0.25
DDX56-212ENST00000485367 PCGF6Q9BYE7 350 aa16.6■□□□□ 0.25
DDX56-212ENST00000485367 ADGBQ8N7X0 1667 aa16.6■□□□□ 0.25
DDX56-212ENST00000485367 CCDC141Q6ZP82 1450 aa16.6■□□□□ 0.25
DDX56-212ENST00000485367 PLXNC1O60486 1568 aa16.59■□□□□ 0.25
DDX56-212ENST00000485367 C3P01024 1663 aa16.59■□□□□ 0.25
DDX56-212ENST00000485367 RTEL1-TNFRSF6BF6WH68 1400 aa16.59■□□□□ 0.25
DDX56-212ENST00000485367 RSPH4AQ5TD94 716 aa16.59■□□□□ 0.25
DDX56-212ENST00000485367 PREX1Q8TCU6 1659 aa16.58■□□□□ 0.24
DDX56-212ENST00000485367 CNTLNQ9NXG0 1405 aa16.58■□□□□ 0.24
DDX56-212ENST00000485367 GGT6Q6P531 493 aa16.56■□□□□ 0.24
DDX56-212ENST00000485367 SETD1BQ9UPS6 1966 aaKnown RBP16.56■□□□□ 0.24
DDX56-212ENST00000485367 MYOM3Q5VTT5 1437 aa16.56■□□□□ 0.24
DDX56-212ENST00000485367 ARHGEF5Q12774 1597 aa16.56■□□□□ 0.24
DDX56-212ENST00000485367 TSPY4P0CV99 314 aa16.55■□□□□ 0.24
DDX56-212ENST00000485367 TSPY10P0CW01 314 aa16.55■□□□□ 0.24
DDX56-212ENST00000485367 CLTCQ00610 1675 aaKnown RBP16.53■□□□□ 0.24
DDX56-212ENST00000485367 DHX29Q7Z478 1369 aaKnown RBP16.53■□□□□ 0.24
DDX56-212ENST00000485367 MIA2Q96PC5 1412 aa16.53■□□□□ 0.24
DDX56-212ENST00000485367 UHRF1BP1Q6BDS2 1440 aa16.52■□□□□ 0.24
DDX56-212ENST00000485367 MROH2AA6NES4 1674 aa16.52■□□□□ 0.24
DDX56-212ENST00000485367 ZMYM3Q14202 1370 aa16.52■□□□□ 0.23
DDX56-212ENST00000485367 KIF3BO15066 747 aa16.51■□□□□ 0.23
DDX56-212ENST00000485367 ILDR1Q86SU0 546 aaPredicted RBP16.49■□□□□ 0.23
DDX56-212ENST00000485367 PPP6R1Q9UPN7 881 aa16.49■□□□□ 0.23
DDX56-212ENST00000485367 MAST1Q9Y2H9 1570 aa16.47■□□□□ 0.23
DDX56-212ENST00000485367 NPATQ14207 1427 aa16.47■□□□□ 0.23
DDX56-212ENST00000485367 PTPN23Q9H3S7 1636 aa16.46■□□□□ 0.23
DDX56-212ENST00000485367 PTPRKQ15262 1439 aa16.43■□□□□ 0.22
DDX56-212ENST00000485367 FGD6Q6ZV73 1430 aa16.43■□□□□ 0.22
DDX56-212ENST00000485367 STRCQ7RTU9 1775 aa16.43■□□□□ 0.22
DDX56-212ENST00000485367 WASHC2CQ9Y4E1 1318 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms