RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 CDC42BPBQ9Y5S2 1711 aa30.27■■■□□ 2.44
SNX17-206ENST00000484886 CDC42BPAQ5VT25 1732 aa30.25■■■□□ 2.43
SNX17-206ENST00000484886 SCAPERQ9BY12 1400 aa30.25■■■□□ 2.43
SNX17-206ENST00000484886 AEBP2Q6ZN18 517 aaPredicted RBP30.25■■■□□ 2.43
SNX17-206ENST00000484886 RICTORQ6R327 1708 aa30.25■■■□□ 2.43
SNX17-206ENST00000484886 TIAM1Q13009 1591 aa30.24■■■□□ 2.43
SNX17-206ENST00000484886 CCNB3Q8WWL7 1395 aa30.21■■■□□ 2.43
SNX17-206ENST00000484886 POGZQ7Z3K3 1410 aa30.18■■■□□ 2.42
SNX17-206ENST00000484886 ZNF777Q9ULD5 760 aaPredicted RBP30.17■■■□□ 2.42
SNX17-206ENST00000484886 GPATCH8Q9UKJ3 1502 aaKnown RBP30.17■■■□□ 2.42
SNX17-206ENST00000484886 APLP2Q06481 763 aa30.15■■■□□ 2.42
SNX17-206ENST00000484886 SUPT6HQ7KZ85 1726 aaKnown RBP30.14■■■□□ 2.42
SNX17-206ENST00000484886 ZMYM4Q5VZL5 1548 aa30.13■■■□□ 2.41
SNX17-206ENST00000484886 CFDP1Q9UEE9 299 aaPredicted RBP30.12■■■□□ 2.41
SNX17-206ENST00000484886 ZNF518AQ6AHZ1 1483 aa30.11■■■□□ 2.41
SNX17-206ENST00000484886 LRRC9Q6ZRR7 1453 aa30.11■■■□□ 2.41
SNX17-206ENST00000484886 ABCC1P33527 1531 aa30.11■■■□□ 2.41
SNX17-206ENST00000484886 ARHGEF40Q8TER5 1519 aa30.11■■■□□ 2.41
SNX17-206ENST00000484886 KDM4FA0A1W2PPD8 638 aa30.1■■■□□ 2.41
SNX17-206ENST00000484886 MAP3K1Q13233 1512 aa30.1■■■□□ 2.41
SNX17-206ENST00000484886 ITSN2Q9NZM3 1697 aa30.1■■■□□ 2.41
SNX17-206ENST00000484886 ZFYVE16Q7Z3T8 1539 aa30.09■■■□□ 2.41
SNX17-206ENST00000484886 NCOA2Q15596 1464 aa30.08■■■□□ 2.41
SNX17-206ENST00000484886 MYT1LQ9UL68 1186 aa30.08■■■□□ 2.41
SNX17-206ENST00000484886 SAMD9LQ8IVG5 1584 aa30.07■■■□□ 2.4
SNX17-206ENST00000484886 MAGI2Q86UL8 1455 aa30.06■■■□□ 2.4
SNX17-206ENST00000484886 AFAP1Q8N556 730 aa30.05■■■□□ 2.4
SNX17-206ENST00000484886 ARID4BQ4LE39 1312 aaPredicted RBP30.04■■■□□ 2.4
SNX17-206ENST00000484886 YEATS2Q9ULM3 1422 aa30.04■■■□□ 2.4
SNX17-206ENST00000484886 ARHGEF12Q9NZN5 1544 aa30.03■■■□□ 2.4
SNX17-206ENST00000484886 KANK4Q5T7N3 995 aaPredicted RBP30.03■■■□□ 2.4
SNX17-206ENST00000484886 SYCP2Q9BX26 1530 aa30.02■■■□□ 2.4
SNX17-206ENST00000484886 TRAPPC8Q9Y2L5 1435 aa30.01■■■□□ 2.39
SNX17-206ENST00000484886 KDM5CP41229 1560 aa30.01■■■□□ 2.39
SNX17-206ENST00000484886 PLEKHH2Q8IVE3 1493 aa30■■■□□ 2.39
SNX17-206ENST00000484886 HECW2Q9P2P5 1572 aa29.98■■■□□ 2.39
SNX17-206ENST00000484886 HNRNPMP52272 730 aaKnown RBP eCLIP29.97■■■□□ 2.39
SNX17-206ENST00000484886 KIAA1107Q9UPP5 1409 aa29.94■■■□□ 2.38
SNX17-206ENST00000484886 ZNF644Q9H582 1327 aaPredicted RBP29.94■■■□□ 2.38
SNX17-206ENST00000484886 ATP10AO60312 1499 aa29.92■■■□□ 2.38
SNX17-206ENST00000484886 C9orf84Q5VXU9 1444 aa29.9■■■□□ 2.38
SNX17-206ENST00000484886 MLH3Q9UHC1 1453 aa29.9■■■□□ 2.38
SNX17-206ENST00000484886 BCORL1Q5H9F3 1711 aa29.88■■■□□ 2.37
SNX17-206ENST00000484886 CAMSAP2Q08AD1 1489 aa29.87■■■□□ 2.37
SNX17-206ENST00000484886 DIP2CQ9Y2E4 1556 aa29.87■■■□□ 2.37
SNX17-206ENST00000484886 SPAG9O60271 1321 aaKnown RBP29.87■■■□□ 2.37
SNX17-206ENST00000484886 ABCA6Q8N139 1617 aa29.86■■■□□ 2.37
SNX17-206ENST00000484886 SIGLEC1Q9BZZ2 1709 aa29.85■■■□□ 2.37
SNX17-206ENST00000484886 MYOM3Q5VTT5 1437 aa29.84■■■□□ 2.37
SNX17-206ENST00000484886 KIDINS220Q9ULH0 1771 aa29.84■■■□□ 2.37
SNX17-206ENST00000484886 ADAMTSL3P82987 1691 aa29.82■■■□□ 2.36
SNX17-206ENST00000484886 MLECQ14165 292 aa29.82■■■□□ 2.36
SNX17-206ENST00000484886 ATP7AQ04656 1500 aa29.81■■■□□ 2.36
SNX17-206ENST00000484886 MBD5Q9P267 1494 aa29.8■■■□□ 2.36
SNX17-206ENST00000484886 MADDQ8WXG6 1647 aa29.78■■■□□ 2.36
SNX17-206ENST00000484886 INO80Q9ULG1 1556 aaPredicted RBP29.77■■■□□ 2.36
SNX17-206ENST00000484886 CCDC141Q6ZP82 1450 aa29.76■■■□□ 2.35
SNX17-206ENST00000484886 MIA2Q96PC5 1412 aa29.76■■■□□ 2.35
SNX17-206ENST00000484886 REREQ9P2R6 1566 aa29.75■■■□□ 2.35
SNX17-206ENST00000484886 RIMS1Q86UR5 1692 aaKnown RBP29.72■■■□□ 2.35
SNX17-206ENST00000484886 RSPH4AQ5TD94 716 aa29.71■■■□□ 2.35
SNX17-206ENST00000484886 ARHGEF5Q12774 1597 aa29.71■■■□□ 2.35
SNX17-206ENST00000484886 PTPRMP28827 1452 aa29.69■■■□□ 2.34
SNX17-206ENST00000484886 FER1L4A9Z1Z3 1794 aa29.69■■■□□ 2.34
SNX17-206ENST00000484886 PTPN23Q9H3S7 1636 aa29.67■■■□□ 2.34
SNX17-206ENST00000484886 RTEL1-TNFRSF6BF6WH68 1400 aa29.66■■■□□ 2.34
SNX17-206ENST00000484886 TSPY4P0CV99 314 aa29.66■■■□□ 2.34
SNX17-206ENST00000484886 TSPY10P0CW01 314 aa29.66■■■□□ 2.34
SNX17-206ENST00000484886 AGLP35573 1532 aa29.66■■■□□ 2.34
SNX17-206ENST00000484886 FGD6Q6ZV73 1430 aa29.65■■■□□ 2.34
SNX17-206ENST00000484886 PLPPR3Q6T4P5 718 aa29.65■■■□□ 2.34
SNX17-206ENST00000484886 ADGBQ8N7X0 1667 aa29.65■■■□□ 2.34
SNX17-206ENST00000484886 A2MP01023 1474 aa29.64■■■□□ 2.34
SNX17-206ENST00000484886 PPARGC1BQ86YN6 1023 aaKnown RBP29.6■■■□□ 2.33
SNX17-206ENST00000484886 ESF1Q9H501 851 aaKnown RBP29.59■■■□□ 2.33
SNX17-206ENST00000484886 PLXNC1O60486 1568 aa29.58■■■□□ 2.33
SNX17-206ENST00000484886 TCOF1Q13428 1488 aaKnown RBP29.55■■■□□ 2.32
SNX17-206ENST00000484886 MAST1Q9Y2H9 1570 aa29.54■■■□□ 2.32
SNX17-206ENST00000484886 FAM50AQ14320 339 aaKnown RBP29.53■■■□□ 2.32
SNX17-206ENST00000484886 DHX29Q7Z478 1369 aaKnown RBP29.52■■■□□ 2.32
SNX17-206ENST00000484886 CROCC2H7BZ55 1655 aa29.51■■■□□ 2.31
SNX17-206ENST00000484886 DNMT1P26358 1616 aaKnown RBP29.49■■■□□ 2.31
SNX17-206ENST00000484886 GGT6Q6P531 493 aa29.49■■■□□ 2.31
SNX17-206ENST00000484886 ABCC5O15440 1437 aa29.48■■■□□ 2.31
SNX17-206ENST00000484886 DAPK1P53355 1430 aa29.48■■■□□ 2.31
SNX17-206ENST00000484886 SHANK2Q9UPX8 1470 aa29.47■■■□□ 2.31
SNX17-206ENST00000484886 CEBPAP49715 358 aaPredicted RBP29.45■■■□□ 2.31
SNX17-206ENST00000484886 KIF3BO15066 747 aa29.44■■■□□ 2.3
SNX17-206ENST00000484886 CNTLNQ9NXG0 1405 aa29.44■■■□□ 2.3
SNX17-206ENST00000484886 CHIC2Q9UKJ5 165 aa29.41■■■□□ 2.3
SNX17-206ENST00000484886 CLTCQ00610 1675 aaKnown RBP29.4■■■□□ 2.3
SNX17-206ENST00000484886 C3P01024 1663 aa29.39■■■□□ 2.3
SNX17-206ENST00000484886 KIF15Q9NS87 1388 aa29.38■■■□□ 2.29
SNX17-206ENST00000484886 RRP7BPQ9NSQ0 103 aa29.37■■■□□ 2.29
SNX17-206ENST00000484886 DUOX2Q9NRD8 1548 aa29.36■■■□□ 2.29
SNX17-206ENST00000484886 MROH2AA6NES4 1674 aa29.36■■■□□ 2.29
SNX17-206ENST00000484886 ANKRD30AQ9BXX3 1397 aa29.35■■■□□ 2.29
SNX17-206ENST00000484886 PPP6R1Q9UPN7 881 aa29.34■■■□□ 2.29
SNX17-206ENST00000484886 EIF2AK4Q9P2K8 1649 aaKnown RBP29.32■■■□□ 2.28
SNX17-206ENST00000484886 ZMYM3Q14202 1370 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms