RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 PREX2Q70Z35 1606 aa19.73■□□□□ 0.75
MSH5-216ENST00000484309 ARHGEF40Q8TER5 1519 aa19.68■□□□□ 0.74
MSH5-216ENST00000484309 SCAPERQ9BY12 1400 aa19.68■□□□□ 0.74
MSH5-216ENST00000484309 EFCAB2Q5VUJ9 269 aa19.66■□□□□ 0.74
MSH5-216ENST00000484309 ZMYM4Q5VZL5 1548 aa19.66■□□□□ 0.74
MSH5-216ENST00000484309 POGZQ7Z3K3 1410 aa19.65■□□□□ 0.74
MSH5-216ENST00000484309 ITSN2Q9NZM3 1697 aa19.64■□□□□ 0.73
MSH5-216ENST00000484309 ZFYVE16Q7Z3T8 1539 aa19.63■□□□□ 0.73
MSH5-216ENST00000484309 MTUS2Q5JR59 1369 aa19.62■□□□□ 0.73
MSH5-216ENST00000484309 SIGLEC1Q9BZZ2 1709 aa19.62■□□□□ 0.73
MSH5-216ENST00000484309 EHBP1L1Q8N3D4 1523 aa19.61■□□□□ 0.73
MSH5-216ENST00000484309 VPS8Q8N3P4 1428 aa19.6■□□□□ 0.73
MSH5-216ENST00000484309 YEATS2Q9ULM3 1422 aa19.6■□□□□ 0.73
MSH5-216ENST00000484309 ABCC1P33527 1531 aa19.6■□□□□ 0.73
MSH5-216ENST00000484309 BCORL1Q5H9F3 1711 aa19.59■□□□□ 0.73
MSH5-216ENST00000484309 TIAM1Q13009 1591 aa19.59■□□□□ 0.73
MSH5-216ENST00000484309 SAMD9LQ8IVG5 1584 aa19.58■□□□□ 0.73
MSH5-216ENST00000484309 GPATCH8Q9UKJ3 1502 aaKnown RBP19.57■□□□□ 0.72
MSH5-216ENST00000484309 ADAMTSL3P82987 1691 aa19.57■□□□□ 0.72
MSH5-216ENST00000484309 ARHGEF12Q9NZN5 1544 aa19.56■□□□□ 0.72
MSH5-216ENST00000484309 ARID4BQ4LE39 1312 aaPredicted RBP19.56■□□□□ 0.72
MSH5-216ENST00000484309 ZNF518AQ6AHZ1 1483 aa19.56■□□□□ 0.72
MSH5-216ENST00000484309 KDM5CP41229 1560 aa19.56■□□□□ 0.72
MSH5-216ENST00000484309 SUPT6HQ7KZ85 1726 aaKnown RBP19.55■□□□□ 0.72
MSH5-216ENST00000484309 HECW2Q9P2P5 1572 aa19.55■□□□□ 0.72
MSH5-216ENST00000484309 ZNF777Q9ULD5 760 aaPredicted RBP19.55■□□□□ 0.72
MSH5-216ENST00000484309 MADDQ8WXG6 1647 aa19.54■□□□□ 0.72
MSH5-216ENST00000484309 MAGI2Q86UL8 1455 aa19.54■□□□□ 0.72
MSH5-216ENST00000484309 CCNB3Q8WWL7 1395 aa19.54■□□□□ 0.72
MSH5-216ENST00000484309 SYCP2Q9BX26 1530 aa19.53■□□□□ 0.72
MSH5-216ENST00000484309 AFAP1Q8N556 730 aa19.53■□□□□ 0.72
MSH5-216ENST00000484309 TRAPPC8Q9Y2L5 1435 aa19.52■□□□□ 0.72
MSH5-216ENST00000484309 RIMS1Q86UR5 1692 aaKnown RBP19.52■□□□□ 0.71
MSH5-216ENST00000484309 ABCA6Q8N139 1617 aa19.51■□□□□ 0.71
MSH5-216ENST00000484309 DIP2CQ9Y2E4 1556 aa19.5■□□□□ 0.71
MSH5-216ENST00000484309 MYT1LQ9UL68 1186 aa19.5■□□□□ 0.71
MSH5-216ENST00000484309 KIDINS220Q9ULH0 1771 aa19.49■□□□□ 0.71
MSH5-216ENST00000484309 NCOA2Q15596 1464 aa19.48■□□□□ 0.71
MSH5-216ENST00000484309 CFDP1Q9UEE9 299 aaPredicted RBP19.48■□□□□ 0.71
MSH5-216ENST00000484309 ATP10AO60312 1499 aa19.48■□□□□ 0.71
MSH5-216ENST00000484309 FER1L4A9Z1Z3 1794 aa19.47■□□□□ 0.71
MSH5-216ENST00000484309 C9orf84Q5VXU9 1444 aa19.47■□□□□ 0.71
MSH5-216ENST00000484309 LRRC9Q6ZRR7 1453 aa19.46■□□□□ 0.71
MSH5-216ENST00000484309 PTPRMP28827 1452 aa19.44■□□□□ 0.7
MSH5-216ENST00000484309 MLH3Q9UHC1 1453 aa19.44■□□□□ 0.7
MSH5-216ENST00000484309 HNRNPMP52272 730 aaKnown RBP eCLIP19.44■□□□□ 0.7
MSH5-216ENST00000484309 MLECQ14165 292 aa19.44■□□□□ 0.7
MSH5-216ENST00000484309 PLEKHH2Q8IVE3 1493 aa19.42■□□□□ 0.7
MSH5-216ENST00000484309 ZNF644Q9H582 1327 aaPredicted RBP19.42■□□□□ 0.7
MSH5-216ENST00000484309 MAP3K1Q13233 1512 aa19.41■□□□□ 0.7
MSH5-216ENST00000484309 KANK4Q5T7N3 995 aaPredicted RBP19.41■□□□□ 0.7
MSH5-216ENST00000484309 INO80Q9ULG1 1556 aaPredicted RBP19.4■□□□□ 0.7
MSH5-216ENST00000484309 ATP7AQ04656 1500 aa19.4■□□□□ 0.7
MSH5-216ENST00000484309 KIAA1107Q9UPP5 1409 aa19.39■□□□□ 0.69
MSH5-216ENST00000484309 REREQ9P2R6 1566 aa19.39■□□□□ 0.69
MSH5-216ENST00000484309 CAMSAP2Q08AD1 1489 aa19.38■□□□□ 0.69
MSH5-216ENST00000484309 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
MSH5-216ENST00000484309 SPAG9O60271 1321 aaKnown RBP19.36■□□□□ 0.69
MSH5-216ENST00000484309 MBD5Q9P267 1494 aa19.34■□□□□ 0.69
MSH5-216ENST00000484309 APLP2Q06481 763 aa19.33■□□□□ 0.68
MSH5-216ENST00000484309 ADGBQ8N7X0 1667 aa19.33■□□□□ 0.68
MSH5-216ENST00000484309 AGLP35573 1532 aa19.31■□□□□ 0.68
MSH5-216ENST00000484309 CCDC141Q6ZP82 1450 aa19.29■□□□□ 0.68
MSH5-216ENST00000484309 MYOM3Q5VTT5 1437 aa19.29■□□□□ 0.68
MSH5-216ENST00000484309 PLXNC1O60486 1568 aa19.28■□□□□ 0.68
MSH5-216ENST00000484309 ARHGEF5Q12774 1597 aa19.27■□□□□ 0.68
MSH5-216ENST00000484309 A2MP01023 1474 aa19.27■□□□□ 0.67
MSH5-216ENST00000484309 C3P01024 1663 aa19.27■□□□□ 0.67
MSH5-216ENST00000484309 PTPN23Q9H3S7 1636 aa19.23■□□□□ 0.67
MSH5-216ENST00000484309 CEBPAP49715 358 aaPredicted RBP19.23■□□□□ 0.67
MSH5-216ENST00000484309 CLTCQ00610 1675 aaKnown RBP19.23■□□□□ 0.67
MSH5-216ENST00000484309 MIA2Q96PC5 1412 aa19.22■□□□□ 0.67
MSH5-216ENST00000484309 LMTK3Q96Q04 1460 aa19.22■□□□□ 0.67
MSH5-216ENST00000484309 RTEL1-TNFRSF6BF6WH68 1400 aa19.21■□□□□ 0.67
MSH5-216ENST00000484309 CROCC2H7BZ55 1655 aa19.2■□□□□ 0.66
MSH5-216ENST00000484309 PREX1Q8TCU6 1659 aa19.2■□□□□ 0.66
MSH5-216ENST00000484309 ESF1Q9H501 851 aaKnown RBP19.19■□□□□ 0.66
MSH5-216ENST00000484309 MROH2AA6NES4 1674 aa19.19■□□□□ 0.66
MSH5-216ENST00000484309 MAST1Q9Y2H9 1570 aa19.19■□□□□ 0.66
MSH5-216ENST00000484309 RSPH4AQ5TD94 716 aa19.16■□□□□ 0.66
MSH5-216ENST00000484309 FGD6Q6ZV73 1430 aa19.16■□□□□ 0.66
MSH5-216ENST00000484309 TSPY4P0CV99 314 aa19.15■□□□□ 0.66
MSH5-216ENST00000484309 TSPY10P0CW01 314 aa19.15■□□□□ 0.66
MSH5-216ENST00000484309 GGT6Q6P531 493 aa19.15■□□□□ 0.66
MSH5-216ENST00000484309 SETD1BQ9UPS6 1966 aaKnown RBP19.15■□□□□ 0.66
MSH5-216ENST00000484309 DHX29Q7Z478 1369 aaKnown RBP19.14■□□□□ 0.65
MSH5-216ENST00000484309 DNMT1P26358 1616 aaKnown RBP19.14■□□□□ 0.65
MSH5-216ENST00000484309 HSPA2P54652 639 aa19.13■□□□□ 0.65
MSH5-216ENST00000484309 CNTLNQ9NXG0 1405 aa19.13■□□□□ 0.65
MSH5-216ENST00000484309 TCOF1Q13428 1488 aaKnown RBP19.12■□□□□ 0.65
MSH5-216ENST00000484309 KIF3BO15066 747 aa19.09■□□□□ 0.65
MSH5-216ENST00000484309 ABCC5O15440 1437 aa19.08■□□□□ 0.65
MSH5-216ENST00000484309 DAPK1P53355 1430 aa19.08■□□□□ 0.65
MSH5-216ENST00000484309 PPARGC1BQ86YN6 1023 aaKnown RBP19.08■□□□□ 0.64
MSH5-216ENST00000484309 SHANK2Q9UPX8 1470 aa19.07■□□□□ 0.64
MSH5-216ENST00000484309 EIF2AK4Q9P2K8 1649 aaKnown RBP19.07■□□□□ 0.64
MSH5-216ENST00000484309 ZMYM3Q14202 1370 aa19.06■□□□□ 0.64
MSH5-216ENST00000484309 RNF17Q9BXT8 1623 aaKnown RBP19.06■□□□□ 0.64
MSH5-216ENST00000484309 UHRF1BP1Q6BDS2 1440 aa19.06■□□□□ 0.64
MSH5-216ENST00000484309 CEP152O94986 1710 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms