RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 ARID3CA6NKF2 412 aa27.51■■□□□ 1.99
LIMS2-215ENST00000484252 MAGI1Q96QZ7 1491 aaPredicted RBP27.5■■□□□ 1.99
LIMS2-215ENST00000484252 NEFLP07196 543 aa27.49■■□□□ 1.99
LIMS2-215ENST00000484252 RPRD2Q5VT52 1461 aaKnown RBP27.49■■□□□ 1.99
LIMS2-215ENST00000484252 ANKRD30BQ9BXX2 1392 aa27.49■■□□□ 1.99
LIMS2-215ENST00000484252 FKBP8Q14318 412 aa27.48■■□□□ 1.99
LIMS2-215ENST00000484252 WASHC2AQ641Q2 1341 aa27.48■■□□□ 1.99
LIMS2-215ENST00000484252 TROQ12816 1431 aaPredicted RBP27.47■■□□□ 1.99
LIMS2-215ENST00000484252 L3MBTL2Q969R5 705 aa27.46■■□□□ 1.99
LIMS2-215ENST00000484252 TSHZ2Q9NRE2 1034 aa27.45■■□□□ 1.99
LIMS2-215ENST00000484252 ITSN2Q9NZM3 1697 aa27.45■■□□□ 1.98
LIMS2-215ENST00000484252 ADCY10Q96PN6 1610 aa27.41■■□□□ 1.98
LIMS2-215ENST00000484252 CNTLNQ9NXG0 1405 aa27.41■■□□□ 1.98
LIMS2-215ENST00000484252 SYNJ2O15056 1496 aa27.41■■□□□ 1.98
LIMS2-215ENST00000484252 TEX14Q8IWB6 1497 aa27.41■■□□□ 1.98
LIMS2-215ENST00000484252 ZNF644Q9H582 1327 aaPredicted RBP27.39■■□□□ 1.98
LIMS2-215ENST00000484252 CAMSAP2Q08AD1 1489 aa27.39■■□□□ 1.98
LIMS2-215ENST00000484252 ADGBQ8N7X0 1667 aa27.39■■□□□ 1.97
LIMS2-215ENST00000484252 NCOA1Q15788 1441 aa27.38■■□□□ 1.97
LIMS2-215ENST00000484252 CEP170Q5SW79 1584 aa27.38■■□□□ 1.97
LIMS2-215ENST00000484252 FOXD1Q16676 465 aa27.37■■□□□ 1.97
LIMS2-215ENST00000484252 PRG4Q92954 1404 aaPredicted RBP27.37■■□□□ 1.97
LIMS2-215ENST00000484252 CARMIL2Q6F5E8 1435 aa27.35■■□□□ 1.97
LIMS2-215ENST00000484252 SLC4A1APQ9BWU0 796 aaKnown RBP27.35■■□□□ 1.97
LIMS2-215ENST00000484252 ADGRL2O95490 1459 aa27.35■■□□□ 1.97
LIMS2-215ENST00000484252 GPATCH8Q9UKJ3 1502 aaKnown RBP27.34■■□□□ 1.97
LIMS2-215ENST00000484252 CCDC7Q96M83 1385 aa27.34■■□□□ 1.97
LIMS2-215ENST00000484252 BCANQ96GW7 911 aa27.34■■□□□ 1.97
LIMS2-215ENST00000484252 CHMP7Q8WUX9 453 aaPredicted RBP27.33■■□□□ 1.97
LIMS2-215ENST00000484252 CFDP1Q9UEE9 299 aaPredicted RBP27.33■■□□□ 1.97
LIMS2-215ENST00000484252 PZPP20742 1482 aa27.32■■□□□ 1.96
LIMS2-215ENST00000484252 PLB1Q6P1J6 1458 aa27.32■■□□□ 1.96
LIMS2-215ENST00000484252 CROCC2H7BZ55 1655 aa27.31■■□□□ 1.96
LIMS2-215ENST00000484252 NUP160Q12769 1436 aa27.3■■□□□ 1.96
LIMS2-215ENST00000484252 NBPF8Q3BBV2 869 aa27.28■■□□□ 1.96
LIMS2-215ENST00000484252 SPATA31E1Q6ZUB1 1445 aa27.27■■□□□ 1.96
LIMS2-215ENST00000484252 KIF14Q15058 1648 aa27.27■■□□□ 1.96
LIMS2-215ENST00000484252 POLR1AO95602 1720 aaPredicted RBP27.27■■□□□ 1.96
LIMS2-215ENST00000484252 HNRNPUQ00839 825 aaKnown RBP eCLIP27.27■■□□□ 1.96
LIMS2-215ENST00000484252 ANKRD30AQ9BXX3 1397 aa27.24■■□□□ 1.95
LIMS2-215ENST00000484252 ANP32EQ9BTT0 268 aa27.24■■□□□ 1.95
LIMS2-215ENST00000484252 KIAA1107Q9UPP5 1409 aa27.24■■□□□ 1.95
LIMS2-215ENST00000484252 JPH4Q96JJ6 628 aa27.22■■□□□ 1.95
LIMS2-215ENST00000484252 C11orf95C9JLR9 678 aaPredicted RBP27.21■■□□□ 1.95
LIMS2-215ENST00000484252 MBD5Q9P267 1494 aa27.21■■□□□ 1.95
LIMS2-215ENST00000484252 FBLN2P98095 1184 aa27.2■■□□□ 1.94
LIMS2-215ENST00000484252 PRKRIP1Q9H875 184 aaPredicted RBP27.2■■□□□ 1.94
LIMS2-215ENST00000484252 ABCA8O94911 1581 aa27.19■■□□□ 1.94
LIMS2-215ENST00000484252 SHANK2Q9UPX8 1470 aa27.19■■□□□ 1.94
LIMS2-215ENST00000484252 KIF7Q2M1P5 1343 aa27.16■■□□□ 1.94
LIMS2-215ENST00000484252 ZNF777Q9ULD5 760 aaPredicted RBP27.15■■□□□ 1.94
LIMS2-215ENST00000484252 ANKRD50Q9ULJ7 1429 aa27.14■■□□□ 1.94
LIMS2-215ENST00000484252 ABCC10Q5T3U5 1492 aa27.14■■□□□ 1.94
LIMS2-215ENST00000484252 PLEKHD1A6NEE1 506 aa27.14■■□□□ 1.94
LIMS2-215ENST00000484252 CDC42BPAQ5VT25 1732 aa27.13■■□□□ 1.93
LIMS2-215ENST00000484252 ATP10BO94823 1461 aa27.1■■□□□ 1.93
LIMS2-215ENST00000484252 ERICH6BQ5W0A0 696 aa27.1■■□□□ 1.93
LIMS2-215ENST00000484252 PKD2Q13563 968 aa27.09■■□□□ 1.93
LIMS2-215ENST00000484252 KDM5DQ9BY66 1539 aa27.08■■□□□ 1.93
LIMS2-215ENST00000484252 C9orf84Q5VXU9 1444 aa27.08■■□□□ 1.93
LIMS2-215ENST00000484252 ARID4BQ4LE39 1312 aaPredicted RBP27.06■■□□□ 1.92
LIMS2-215ENST00000484252 CCDC184Q52MB2 194 aa27.06■■□□□ 1.92
LIMS2-215ENST00000484252 MRS2Q9HD23 443 aa27.06■■□□□ 1.92
LIMS2-215ENST00000484252 UHRF1BP1Q6BDS2 1440 aa27.05■■□□□ 1.92
LIMS2-215ENST00000484252 USP47Q96K76 1375 aa27.04■■□□□ 1.92
LIMS2-215ENST00000484252 ARHGEF5Q12774 1597 aa27.03■■□□□ 1.92
LIMS2-215ENST00000484252 ZBED9Q6R2W3 1325 aa27.03■■□□□ 1.92
LIMS2-215ENST00000484252 ARHGEF12Q9NZN5 1544 aa27.03■■□□□ 1.92
LIMS2-215ENST00000484252 KDM5CP41229 1560 aa27.01■■□□□ 1.91
LIMS2-215ENST00000484252 RALGAPBQ86X10 1494 aa27■■□□□ 1.91
LIMS2-215ENST00000484252 NUP155O75694 1391 aa27■■□□□ 1.91
LIMS2-215ENST00000484252 TSPY4P0CV99 314 aa26.99■■□□□ 1.91
LIMS2-215ENST00000484252 TSPY10P0CW01 314 aa26.99■■□□□ 1.91
LIMS2-215ENST00000484252 FAM9BQ8IZU0 186 aa26.98■■□□□ 1.91
LIMS2-215ENST00000484252 BCORL1Q5H9F3 1711 aa26.96■■□□□ 1.91
LIMS2-215ENST00000484252 DHX29Q7Z478 1369 aaKnown RBP26.96■■□□□ 1.91
LIMS2-215ENST00000484252 PTPRGP23470 1445 aa26.96■■□□□ 1.91
LIMS2-215ENST00000484252 RBM19Q9Y4C8 960 aaKnown RBP26.96■■□□□ 1.91
LIMS2-215ENST00000484252 BCL11AQ9H165 835 aa26.95■■□□□ 1.9
LIMS2-215ENST00000484252 ROCK2O75116 1388 aaKnown RBP26.94■■□□□ 1.9
LIMS2-215ENST00000484252 KIF15Q9NS87 1388 aa26.93■■□□□ 1.9
LIMS2-215ENST00000484252 ZNF326Q5BKZ1 582 aaKnown RBP26.9■■□□□ 1.9
LIMS2-215ENST00000484252 RSPH4AQ5TD94 716 aa26.89■■□□□ 1.9
LIMS2-215ENST00000484252 CCDC141Q6ZP82 1450 aa26.89■■□□□ 1.9
LIMS2-215ENST00000484252 PREX2Q70Z35 1606 aa26.89■■□□□ 1.89
LIMS2-215ENST00000484252 PPP4R2Q9NY27 417 aa26.88■■□□□ 1.89
LIMS2-215ENST00000484252 SAMD9LQ8IVG5 1584 aa26.86■■□□□ 1.89
LIMS2-215ENST00000484252 IRX6P78412 446 aaPredicted RBP26.85■■□□□ 1.89
LIMS2-215ENST00000484252 HNRNPMP52272 730 aaKnown RBP eCLIP26.84■■□□□ 1.89
LIMS2-215ENST00000484252 CHD1O14646 1710 aa26.84■■□□□ 1.89
LIMS2-215ENST00000484252 CARD11Q9BXL7 1154 aa26.83■■□□□ 1.89
LIMS2-215ENST00000484252 CDC42BPBQ9Y5S2 1711 aa26.83■■□□□ 1.89
LIMS2-215ENST00000484252 FAM135AQ9P2D6 1515 aa26.8■■□□□ 1.88
LIMS2-215ENST00000484252 MAST1Q9Y2H9 1570 aa26.8■■□□□ 1.88
LIMS2-215ENST00000484252 SMG6Q86US8 1419 aaKnown RBP26.8■■□□□ 1.88
LIMS2-215ENST00000484252 KTN1Q86UP2 1357 aaKnown RBP26.77■■□□□ 1.88
LIMS2-215ENST00000484252 POLR3GLQ9BT43 218 aa26.77■■□□□ 1.88
LIMS2-215ENST00000484252 SHROOM2Q13796 1616 aa26.74■■□□□ 1.87
LIMS2-215ENST00000484252 UNC13BO14795 1591 aa26.74■■□□□ 1.87
LIMS2-215ENST00000484252 DCAF11Q8TEB1 546 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms