RNA–Protein interactions for RNA: ENST00000484042.1

FXR1-217, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 4

Gene FXR1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-217ENST00000484042 MS4A4AQ96JQ5 239 aa13.26□□□□□ -0.29
FXR1-217ENST00000484042 STK25O00506 426 aa13.25□□□□□ -0.29
FXR1-217ENST00000484042 KRTAP3-3Q9BYR6 98 aa13.25□□□□□ -0.29
FXR1-217ENST00000484042 KRTAP3-2Q9BYR7 98 aa13.25□□□□□ -0.29
FXR1-217ENST00000484042 PHF8Q9UPP1 1060 aa13.25□□□□□ -0.29
FXR1-217ENST00000484042 HOXB1P14653 301 aaPredicted RBP13.24□□□□□ -0.29
FXR1-217ENST00000484042 TMEM92Q6UXU6 159 aa13.24□□□□□ -0.29
FXR1-217ENST00000484042 ZNF710Q8N1W2 664 aa13.24□□□□□ -0.29
FXR1-217ENST00000484042 DOK7Q18PE1 504 aa13.22□□□□□ -0.29
FXR1-217ENST00000484042 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
FXR1-217ENST00000484042 STK24Q9Y6E0 443 aa13.19□□□□□ -0.3
FXR1-217ENST00000484042 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.17□□□□□ -0.3
FXR1-217ENST00000484042 PLCB2Q00722 1185 aa13.14□□□□□ -0.31
FXR1-217ENST00000484042 ERBB3P21860 1342 aa13.13□□□□□ -0.31
FXR1-217ENST00000484042 RIMBP2O15034 1052 aa13.13□□□□□ -0.31
FXR1-217ENST00000484042 NLRP6P59044 892 aa13.12□□□□□ -0.31
FXR1-217ENST00000484042 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
FXR1-217ENST00000484042 FBXO22Q8NEZ5 403 aa13.12□□□□□ -0.31
FXR1-217ENST00000484042 ZSWIM6Q9HCJ5 1215 aa13.09□□□□□ -0.31
FXR1-217ENST00000484042 GPR153Q6NV75 609 aa13.07□□□□□ -0.32
FXR1-217ENST00000484042 VARS2Q5ST30 1063 aaKnown RBP13.06□□□□□ -0.32
FXR1-217ENST00000484042 MFRPQ9BY79 579 aa13.06□□□□□ -0.32
FXR1-217ENST00000484042 SPRYD3Q8NCJ5 442 aa13.05□□□□□ -0.32
FXR1-217ENST00000484042 PAXIP1Q6ZW49 1069 aaPredicted RBP13.04□□□□□ -0.32
FXR1-217ENST00000484042 GTPBP6O43824 516 aaPredicted RBP13.02□□□□□ -0.33
FXR1-217ENST00000484042 SLC24A1O60721 1099 aa13.01□□□□□ -0.33
FXR1-217ENST00000484042 RYDENQ9NUL5 291 aaKnown RBP13.01□□□□□ -0.33
FXR1-217ENST00000484042 CFAP44Q96MT7 982 aa13□□□□□ -0.33
FXR1-217ENST00000484042 ARSIQ5FYB1 569 aa12.99□□□□□ -0.33
FXR1-217ENST00000484042 ZNF687Q8N1G0 1237 aa12.98□□□□□ -0.33
FXR1-217ENST00000484042 KHSRPQ92945 711 aaKnown RBP eCLIP12.95□□□□□ -0.341e-6■■□□□ 13
FXR1-217ENST00000484042 KIF3CO14782 793 aa12.94□□□□□ -0.34
FXR1-217ENST00000484042 C2orf72A6NCS6 295 aa12.93□□□□□ -0.34
FXR1-217ENST00000484042 ZNF316A6NFI3 1004 aaPredicted RBP12.89□□□□□ -0.35
FXR1-217ENST00000484042 HAP1P54257 671 aaPredicted RBP12.88□□□□□ -0.35
FXR1-217ENST00000484042 PPP1R37O75864 691 aa12.85□□□□□ -0.35
FXR1-217ENST00000484042 RNF166Q96A37 237 aaPredicted RBP12.85□□□□□ -0.35
FXR1-217ENST00000484042 MYT1LQ9UL68 1186 aa12.83□□□□□ -0.36
FXR1-217ENST00000484042 NUDT7P0C024 238 aa12.82□□□□□ -0.36
FXR1-217ENST00000484042 SLC34A2O95436 690 aa12.81□□□□□ -0.36
FXR1-217ENST00000484042 TMC2Q8TDI7 906 aa12.81□□□□□ -0.36
FXR1-217ENST00000484042 TSHZ2Q9NRE2 1034 aa12.81□□□□□ -0.36
FXR1-217ENST00000484042 ANKRD13DQ6ZTN6 518 aa12.8□□□□□ -0.36
FXR1-217ENST00000484042 PCDHGA4Q9Y5G9 962 aa12.79□□□□□ -0.36
FXR1-217ENST00000484042 LHX6Q9UPM6 363 aa12.77□□□□□ -0.37
FXR1-217ENST00000484042 VSIG10Q8N0Z9 540 aa12.75□□□□□ -0.37
FXR1-217ENST00000484042 PTGER2P43116 358 aa12.74□□□□□ -0.37
FXR1-217ENST00000484042 LSM11P83369 360 aaKnown RBP eCLIP12.74□□□□□ -0.37
FXR1-217ENST00000484042 POTEEQ6S8J3 1075 aa12.72□□□□□ -0.37
FXR1-217ENST00000484042 PBX2P40425 430 aa12.69□□□□□ -0.38
FXR1-217ENST00000484042 AXIN2Q9Y2T1 843 aa12.69□□□□□ -0.38
FXR1-217ENST00000484042 KDM2AQ9Y2K7 1162 aa12.68□□□□□ -0.38
FXR1-217ENST00000484042 KDM4FA0A1W2PPD8 638 aa12.66□□□□□ -0.38
FXR1-217ENST00000484042 CADPS2Q86UW7 1296 aa12.66□□□□□ -0.38
FXR1-217ENST00000484042 PTCD2Q8WV60 388 aaKnown RBP12.66□□□□□ -0.38
FXR1-217ENST00000484042 FOXK1P85037 733 aa12.65□□□□□ -0.38
FXR1-217ENST00000484042 PLPP6Q8IY26 295 aa12.64□□□□□ -0.39
FXR1-217ENST00000484042 GPHNQ9NQX3 736 aaPredicted RBP12.64□□□□□ -0.39
FXR1-217ENST00000484042 DSG2Q14126 1118 aa12.6□□□□□ -0.39
FXR1-217ENST00000484042 PSDA5PKW4 1024 aaPredicted RBP12.59□□□□□ -0.39
FXR1-217ENST00000484042 ARHGAP33O14559 1287 aa12.59□□□□□ -0.39
FXR1-217ENST00000484042 CRISPLD2Q9H0B8 497 aa12.56□□□□□ -0.4
FXR1-217ENST00000484042 NCKAP5LQ9HCH0 1330 aa12.56□□□□□ -0.4
FXR1-217ENST00000484042 ADGRD1Q6QNK2 874 aa12.55□□□□□ -0.4
FXR1-217ENST00000484042 TBC1D12O60347 775 aa12.52□□□□□ -0.41
FXR1-217ENST00000484042 PDE4AP27815 886 aa12.52□□□□□ -0.41
FXR1-217ENST00000484042 PSEN2P49810 448 aa12.51□□□□□ -0.41
FXR1-217ENST00000484042 MFSD10Q14728 455 aa12.51□□□□□ -0.41
FXR1-217ENST00000484042 DMRTA1Q5VZB9 504 aa12.51□□□□□ -0.41
FXR1-217ENST00000484042 TK2O00142 265 aa12.48□□□□□ -0.41
FXR1-217ENST00000484042 PPP4R3BQ5MIZ7 849 aa12.48□□□□□ -0.41
FXR1-217ENST00000484042 HRO43593 1189 aa12.46□□□□□ -0.41
FXR1-217ENST00000484042 OXER1Q8TDS5 423 aa12.46□□□□□ -0.41
FXR1-217ENST00000484042 LARP6Q9BRS8 491 aaKnown RBP12.46□□□□□ -0.41
FXR1-217ENST00000484042 WDR70Q9NW82 654 aa12.46□□□□□ -0.41
FXR1-217ENST00000484042 HCSTQ9UBK5 93 aa12.45□□□□□ -0.42
FXR1-217ENST00000484042 DDX27Q96GQ7 796 aaKnown RBP12.44□□□□□ -0.42
FXR1-217ENST00000484042 UPF1Q92900 1129 aaKnown RBP eCLIP12.43□□□□□ -0.42
FXR1-217ENST00000484042 PPP1R15BQ5SWA1 713 aa12.4□□□□□ -0.42
FXR1-217ENST00000484042 KCNK17Q96T54 332 aa12.4□□□□□ -0.42
FXR1-217ENST00000484042 P3H3Q8IVL6 736 aa12.39□□□□□ -0.43
FXR1-217ENST00000484042 PLA2G2EQ9NZK7 142 aa12.39□□□□□ -0.43
FXR1-217ENST00000484042 CAMK2BQ13554 666 aa12.37□□□□□ -0.43
FXR1-217ENST00000484042 E2F4Q16254 413 aa12.37□□□□□ -0.43
FXR1-217ENST00000484042 ZNF454Q8N9F8 522 aa12.36□□□□□ -0.43
FXR1-217ENST00000484042 KCNV2Q8TDN2 545 aa12.35□□□□□ -0.43
FXR1-217ENST00000484042 KCTD12Q96CX2 325 aaKnown RBP12.34□□□□□ -0.43
FXR1-217ENST00000484042 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
FXR1-217ENST00000484042 STAC3Q96MF2 364 aa12.34□□□□□ -0.43
FXR1-217ENST00000484042 VPS9D1Q9Y2B5 631 aa12.34□□□□□ -0.43
FXR1-217ENST00000484042 BCL2L12Q9HB09 334 aa12.33□□□□□ -0.44
FXR1-217ENST00000484042 ANO8Q9HCE9 1232 aaPredicted RBP12.32□□□□□ -0.44
FXR1-217ENST00000484042 FOSBP53539 338 aa12.31□□□□□ -0.44
FXR1-217ENST00000484042 ARIH1Q9Y4X5 557 aaPredicted RBP12.31□□□□□ -0.44
FXR1-217ENST00000484042 ARHGEF1Q92888 912 aaKnown RBP12.3□□□□□ -0.44
FXR1-217ENST00000484042 BCANQ96GW7 911 aa12.28□□□□□ -0.44
FXR1-217ENST00000484042 SLC4A5Q9BY07 1137 aa12.28□□□□□ -0.44
FXR1-217ENST00000484042 EVI5O60447 810 aa12.27□□□□□ -0.45
FXR1-217ENST00000484042 PTPREP23469 700 aa12.25□□□□□ -0.45
FXR1-217ENST00000484042 JPH4Q96JJ6 628 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms