RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.26■□□□□ 0.35
DDX39B-220ENST00000482195 FANCAO15360 1455 aa17.25■□□□□ 0.35
DDX39B-220ENST00000482195 PCF11O94913 1555 aaKnown RBP17.24■□□□□ 0.35
DDX39B-220ENST00000482195 AKNAQ7Z591 1439 aa17.24■□□□□ 0.35
DDX39B-220ENST00000482195 CDK13Q14004 1512 aaKnown RBP17.24■□□□□ 0.35
DDX39B-220ENST00000482195 ZFYVE16Q7Z3T8 1539 aa17.22■□□□□ 0.35
DDX39B-220ENST00000482195 ZBTB22O15209 634 aa17.2■□□□□ 0.34
DDX39B-220ENST00000482195 ZMYM4Q5VZL5 1548 aa17.2■□□□□ 0.34
DDX39B-220ENST00000482195 FER1L4A9Z1Z3 1794 aa17.2■□□□□ 0.34
DDX39B-220ENST00000482195 SIGLEC1Q9BZZ2 1709 aa17.18■□□□□ 0.34
DDX39B-220ENST00000482195 MYO5CQ9NQX4 1742 aa17.18■□□□□ 0.34
DDX39B-220ENST00000482195 HECW1Q76N89 1606 aa17.18■□□□□ 0.34
DDX39B-220ENST00000482195 POGZQ7Z3K3 1410 aa17.18■□□□□ 0.34
DDX39B-220ENST00000482195 LMTK3Q96Q04 1460 aa17.18■□□□□ 0.34
DDX39B-220ENST00000482195 ATP1B4Q9UN42 357 aaPredicted RBP17.16■□□□□ 0.34
DDX39B-220ENST00000482195 YEATS2Q9ULM3 1422 aa17.15■□□□□ 0.34
DDX39B-220ENST00000482195 FBXO41Q8TF61 875 aa17.15■□□□□ 0.34
DDX39B-220ENST00000482195 MLECQ14165 292 aa17.13■□□□□ 0.33
DDX39B-220ENST00000482195 KIF14Q15058 1648 aa17.12■□□□□ 0.33
DDX39B-220ENST00000482195 UBTFP17480 764 aaKnown RBP17.12■□□□□ 0.33
DDX39B-220ENST00000482195 SCAPERQ9BY12 1400 aa17.11■□□□□ 0.33
DDX39B-220ENST00000482195 MAGI2Q86UL8 1455 aa17.11■□□□□ 0.33
DDX39B-220ENST00000482195 FMN1Q68DA7 1419 aa17.1■□□□□ 0.33
DDX39B-220ENST00000482195 HSPA2P54652 639 aa17.09■□□□□ 0.33
DDX39B-220ENST00000482195 PLCH2O75038 1416 aa17.09■□□□□ 0.33
DDX39B-220ENST00000482195 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.32
DDX39B-220ENST00000482195 LRRIQ1Q96JM4 1722 aa17.07■□□□□ 0.32
DDX39B-220ENST00000482195 ARHGAP5Q13017 1502 aa17.06■□□□□ 0.32
DDX39B-220ENST00000482195 ARHGAP35Q9NRY4 1499 aa17.06■□□□□ 0.32
DDX39B-220ENST00000482195 C9orf84Q5VXU9 1444 aa17.06■□□□□ 0.32
DDX39B-220ENST00000482195 PREX1Q8TCU6 1659 aa17.05■□□□□ 0.32
DDX39B-220ENST00000482195 CDK11AQ9UQ88 783 aaPredicted RBP17.04■□□□□ 0.32
DDX39B-220ENST00000482195 ATP10AO60312 1499 aa17.04■□□□□ 0.32
DDX39B-220ENST00000482195 CLIP1P30622 1438 aa17.04■□□□□ 0.32
DDX39B-220ENST00000482195 EFCAB2Q5VUJ9 269 aa17.03■□□□□ 0.32
DDX39B-220ENST00000482195 MYT1LQ9UL68 1186 aa17.03■□□□□ 0.32
DDX39B-220ENST00000482195 ARHGEF12Q9NZN5 1544 aa17.02■□□□□ 0.32
DDX39B-220ENST00000482195 ZNF518AQ6AHZ1 1483 aa17.02■□□□□ 0.32
DDX39B-220ENST00000482195 TROQ12816 1431 aaPredicted RBP17.01■□□□□ 0.31
DDX39B-220ENST00000482195 CDC42BPBQ9Y5S2 1711 aa17.01■□□□□ 0.31
DDX39B-220ENST00000482195 KDM5CP41229 1560 aa16.99■□□□□ 0.31
DDX39B-220ENST00000482195 PREX2Q70Z35 1606 aa16.99■□□□□ 0.31
DDX39B-220ENST00000482195 DIP2CQ9Y2E4 1556 aa16.98■□□□□ 0.31
DDX39B-220ENST00000482195 ITSN2Q9NZM3 1697 aa16.97■□□□□ 0.31
DDX39B-220ENST00000482195 ABCA6Q8N139 1617 aa16.97■□□□□ 0.31
DDX39B-220ENST00000482195 CEBPAP49715 358 aaPredicted RBP16.94■□□□□ 0.3
DDX39B-220ENST00000482195 ABCC1P33527 1531 aa16.94■□□□□ 0.3
DDX39B-220ENST00000482195 CCDC18Q5T9S5 1454 aa16.93■□□□□ 0.3
DDX39B-220ENST00000482195 AFAP1Q8N556 730 aa16.93■□□□□ 0.3
DDX39B-220ENST00000482195 CDC42BPAQ5VT25 1732 aa16.93■□□□□ 0.3
DDX39B-220ENST00000482195 C3P01024 1663 aa16.92■□□□□ 0.3
DDX39B-220ENST00000482195 REREQ9P2R6 1566 aa16.91■□□□□ 0.3
DDX39B-220ENST00000482195 UHRF1BP1Q6BDS2 1440 aa16.91■□□□□ 0.3
DDX39B-220ENST00000482195 CERKQ8TCT0 537 aa16.91■□□□□ 0.3
DDX39B-220ENST00000482195 FOXD4L1Q9NU39 408 aa16.91■□□□□ 0.3
DDX39B-220ENST00000482195 SETD1BQ9UPS6 1966 aaKnown RBP16.91■□□□□ 0.3
DDX39B-220ENST00000482195 STRCQ7RTU9 1775 aa16.9■□□□□ 0.3
DDX39B-220ENST00000482195 DMRT2Q9Y5R5 561 aa16.9■□□□□ 0.3
DDX39B-220ENST00000482195 CASKIN1Q8WXD9 1431 aa16.88■□□□□ 0.29
DDX39B-220ENST00000482195 ESF1Q9H501 851 aaKnown RBP16.88■□□□□ 0.29
DDX39B-220ENST00000482195 TRAPPC8Q9Y2L5 1435 aa16.87■□□□□ 0.29
DDX39B-220ENST00000482195 MLH3Q9UHC1 1453 aa16.87■□□□□ 0.29
DDX39B-220ENST00000482195 KIDINS220Q9ULH0 1771 aa16.87■□□□□ 0.29
DDX39B-220ENST00000482195 HOXD11P31277 338 aaPredicted RBP16.85■□□□□ 0.29
DDX39B-220ENST00000482195 FYCO1Q9BQS8 1478 aa16.85■□□□□ 0.29
DDX39B-220ENST00000482195 AGLP35573 1532 aa16.84■□□□□ 0.29
DDX39B-220ENST00000482195 SYCP2Q9BX26 1530 aa16.84■□□□□ 0.29
DDX39B-220ENST00000482195 SUPT6HQ7KZ85 1726 aaKnown RBP16.84■□□□□ 0.29
DDX39B-220ENST00000482195 SAMD9LQ8IVG5 1584 aa16.83■□□□□ 0.28
DDX39B-220ENST00000482195 ZNF777Q9ULD5 760 aaPredicted RBP16.83■□□□□ 0.28
DDX39B-220ENST00000482195 MROH2AA6NES4 1674 aa16.79■□□□□ 0.28
DDX39B-220ENST00000482195 CNTLNQ9NXG0 1405 aa16.79■□□□□ 0.28
DDX39B-220ENST00000482195 CLTCQ00610 1675 aaKnown RBP16.78■□□□□ 0.28
DDX39B-220ENST00000482195 ATP7AQ04656 1500 aa16.76■□□□□ 0.27
DDX39B-220ENST00000482195 INO80Q9ULG1 1556 aaPredicted RBP16.75■□□□□ 0.27
DDX39B-220ENST00000482195 SPAG9O60271 1321 aaKnown RBP16.74■□□□□ 0.27
DDX39B-220ENST00000482195 PTPRTO14522 1441 aa16.74■□□□□ 0.27
DDX39B-220ENST00000482195 GPATCH8Q9UKJ3 1502 aaKnown RBP16.74■□□□□ 0.27
DDX39B-220ENST00000482195 CAMSAP1Q5T5Y3 1602 aa16.74■□□□□ 0.27
DDX39B-220ENST00000482195 MYO3AQ8NEV4 1616 aa16.73■□□□□ 0.27
DDX39B-220ENST00000482195 NCOA1Q15788 1441 aa16.72■□□□□ 0.27
DDX39B-220ENST00000482195 HNRNPMP52272 730 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDX39B-220ENST00000482195 CCNB3Q8WWL7 1395 aa16.72■□□□□ 0.27
DDX39B-220ENST00000482195 PLEKHH2Q8IVE3 1493 aa16.72■□□□□ 0.27
DDX39B-220ENST00000482195 DISP3Q9P2K9 1392 aa16.71■□□□□ 0.27
DDX39B-220ENST00000482195 PLXNC1O60486 1568 aa16.71■□□□□ 0.27
DDX39B-220ENST00000482195 ZNF142P52746 1687 aaPredicted RBP16.71■□□□□ 0.27
DDX39B-220ENST00000482195 ADGBQ8N7X0 1667 aa16.71■□□□□ 0.27
DDX39B-220ENST00000482195 MTUS2Q5JR59 1369 aa16.7■□□□□ 0.26
DDX39B-220ENST00000482195 CFDP1Q9UEE9 299 aaPredicted RBP16.7■□□□□ 0.26
DDX39B-220ENST00000482195 NPATQ14207 1427 aa16.7■□□□□ 0.26
DDX39B-220ENST00000482195 SPATA31D1Q6ZQQ2 1576 aa16.69■□□□□ 0.26
DDX39B-220ENST00000482195 A2MP01023 1474 aa16.69■□□□□ 0.26
DDX39B-220ENST00000482195 LTBP4Q8N2S1 1624 aa16.68■□□□□ 0.26
DDX39B-220ENST00000482195 TIAM1Q13009 1591 aa16.68■□□□□ 0.26
DDX39B-220ENST00000482195 ZMYM3Q14202 1370 aa16.67■□□□□ 0.26
DDX39B-220ENST00000482195 EHBP1L1Q8N3D4 1523 aa16.66■□□□□ 0.26
DDX39B-220ENST00000482195 KIAA1107Q9UPP5 1409 aa16.66■□□□□ 0.26
DDX39B-220ENST00000482195 CEP170BQ9Y4F5 1589 aaPredicted RBP16.66■□□□□ 0.26
DDX39B-220ENST00000482195 GGT6Q6P531 493 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms