RNA–Protein interactions for RNA: ENST00000482014.1

CHRD-213, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-213ENST00000482014 ARHGEF12Q9NZN5 1544 aa26.84■■□□□ 1.89
CHRD-213ENST00000482014 SAMD9Q5K651 1589 aa26.84■■□□□ 1.89
CHRD-213ENST00000482014 UHRF1BP1Q6BDS2 1440 aa26.82■■□□□ 1.88
CHRD-213ENST00000482014 PTPRTO14522 1441 aa26.8■■□□□ 1.88
CHRD-213ENST00000482014 HECW1Q76N89 1606 aa26.79■■□□□ 1.88
CHRD-213ENST00000482014 ATP10AO60312 1499 aa26.79■■□□□ 1.88
CHRD-213ENST00000482014 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.79■■□□□ 1.88
CHRD-213ENST00000482014 STRCQ7RTU9 1775 aa26.79■■□□□ 1.88
CHRD-213ENST00000482014 CEBPAP49715 358 aaPredicted RBP26.78■■□□□ 1.88
CHRD-213ENST00000482014 C9orf84Q5VXU9 1444 aa26.77■■□□□ 1.88
CHRD-213ENST00000482014 IQSEC2Q5JU85 1478 aa26.75■■□□□ 1.87
CHRD-213ENST00000482014 SCAPERQ9BY12 1400 aa26.75■■□□□ 1.87
CHRD-213ENST00000482014 SETD1BQ9UPS6 1966 aaKnown RBP26.73■■□□□ 1.87
CHRD-213ENST00000482014 PLCH2O75038 1416 aa26.68■■□□□ 1.86
CHRD-213ENST00000482014 LTBP4Q8N2S1 1624 aa26.65■■□□□ 1.86
CHRD-213ENST00000482014 EFCAB2Q5VUJ9 269 aa26.62■■□□□ 1.85
CHRD-213ENST00000482014 CSRNP3Q8WYN3 585 aa26.6■■□□□ 1.85
CHRD-213ENST00000482014 ZNF518AQ6AHZ1 1483 aa26.57■■□□□ 1.84
CHRD-213ENST00000482014 ESF1Q9H501 851 aaKnown RBP26.57■■□□□ 1.84
CHRD-213ENST00000482014 RANGAP1P46060 587 aaPredicted RBP26.56■■□□□ 1.84
CHRD-213ENST00000482014 TRAPPC8Q9Y2L5 1435 aa26.56■■□□□ 1.84
CHRD-213ENST00000482014 NCOA1Q15788 1441 aa26.55■■□□□ 1.84
CHRD-213ENST00000482014 EEA1Q15075 1411 aa26.54■■□□□ 1.84
CHRD-213ENST00000482014 MYT1LQ9UL68 1186 aa26.52■■□□□ 1.84
CHRD-213ENST00000482014 UBAP1LF5GYI3 381 aa26.5■■□□□ 1.83
CHRD-213ENST00000482014 REREQ9P2R6 1566 aa26.5■■□□□ 1.83
CHRD-213ENST00000482014 AFAP1Q8N556 730 aa26.48■■□□□ 1.83
CHRD-213ENST00000482014 C3P01024 1663 aa26.47■■□□□ 1.83
CHRD-213ENST00000482014 KDM5CP41229 1560 aa26.47■■□□□ 1.83
CHRD-213ENST00000482014 CDK13Q14004 1512 aaKnown RBP26.47■■□□□ 1.83
CHRD-213ENST00000482014 CDK11AQ9UQ88 783 aaPredicted RBP26.45■■□□□ 1.82
CHRD-213ENST00000482014 CNTLNQ9NXG0 1405 aa26.45■■□□□ 1.82
CHRD-213ENST00000482014 MYO5CQ9NQX4 1742 aa26.44■■□□□ 1.82
CHRD-213ENST00000482014 AGLP35573 1532 aa26.44■■□□□ 1.82
CHRD-213ENST00000482014 DIP2CQ9Y2E4 1556 aa26.43■■□□□ 1.82
CHRD-213ENST00000482014 CHIC1Q5VXU3 224 aa26.4■■□□□ 1.82
CHRD-213ENST00000482014 MLH3Q9UHC1 1453 aa26.4■■□□□ 1.82
CHRD-213ENST00000482014 CAMSAP1Q5T5Y3 1602 aa26.39■■□□□ 1.81
CHRD-213ENST00000482014 ZNF335Q9H4Z2 1342 aaPredicted RBP26.39■■□□□ 1.81
CHRD-213ENST00000482014 ARHGAP5Q13017 1502 aa26.38■■□□□ 1.81
CHRD-213ENST00000482014 NPATQ14207 1427 aa26.38■■□□□ 1.81
CHRD-213ENST00000482014 PKD2Q13563 968 aa26.35■■□□□ 1.81
CHRD-213ENST00000482014 NCKAP5LQ9HCH0 1330 aa26.33■■□□□ 1.81
CHRD-213ENST00000482014 ABCA6Q8N139 1617 aa26.32■■□□□ 1.8
CHRD-213ENST00000482014 ATP1B4Q9UN42 357 aaPredicted RBP26.32■■□□□ 1.8
CHRD-213ENST00000482014 KIF14Q15058 1648 aa26.32■■□□□ 1.8
CHRD-213ENST00000482014 CLIP1P30622 1438 aa26.3■■□□□ 1.8
CHRD-213ENST00000482014 TROQ12816 1431 aaPredicted RBP26.29■■□□□ 1.8
CHRD-213ENST00000482014 PLA2R1Q13018 1463 aa26.29■■□□□ 1.8
CHRD-213ENST00000482014 FMN1Q68DA7 1419 aa26.28■■□□□ 1.8
CHRD-213ENST00000482014 MED1Q15648 1581 aaPredicted RBP26.27■■□□□ 1.8
CHRD-213ENST00000482014 ZMYM3Q14202 1370 aa26.26■■□□□ 1.79
CHRD-213ENST00000482014 HSPA1LP34931 641 aa26.24■■□□□ 1.79
CHRD-213ENST00000482014 MROH2AA6NES4 1674 aa26.24■■□□□ 1.79
CHRD-213ENST00000482014 TOM1O60784 492 aa26.23■■□□□ 1.79
CHRD-213ENST00000482014 SCAF1Q9H7N4 1312 aaKnown RBP26.22■■□□□ 1.79
CHRD-213ENST00000482014 PPP6R1Q9UPN7 881 aa26.22■■□□□ 1.79
CHRD-213ENST00000482014 TCOF1Q13428 1488 aaKnown RBP26.22■■□□□ 1.79
CHRD-213ENST00000482014 PHF23Q9BUL5 403 aaPredicted RBP26.2■■□□□ 1.78
CHRD-213ENST00000482014 ABCC1P33527 1531 aa26.19■■□□□ 1.78
CHRD-213ENST00000482014 PIP4K2BP78356 416 aa26.17■■□□□ 1.78
CHRD-213ENST00000482014 ZNF142P52746 1687 aaPredicted RBP26.15■■□□□ 1.78
CHRD-213ENST00000482014 KIDINS220Q9ULH0 1771 aa26.15■■□□□ 1.78
CHRD-213ENST00000482014 CDC42BPBQ9Y5S2 1711 aa26.14■■□□□ 1.77
CHRD-213ENST00000482014 CEP170BQ9Y4F5 1589 aaPredicted RBP26.13■■□□□ 1.77
CHRD-213ENST00000482014 ITSN2Q9NZM3 1697 aa26.12■■□□□ 1.77
CHRD-213ENST00000482014 MYO3AQ8NEV4 1616 aa26.11■■□□□ 1.77
CHRD-213ENST00000482014 CPS1P31327 1500 aa26.1■■□□□ 1.77
CHRD-213ENST00000482014 PREX2Q70Z35 1606 aa26.1■■□□□ 1.77
CHRD-213ENST00000482014 PTPRKQ15262 1439 aa26.09■■□□□ 1.77
CHRD-213ENST00000482014 SUPT6HQ7KZ85 1726 aaKnown RBP26.08■■□□□ 1.76
CHRD-213ENST00000482014 UBTFP17480 764 aaKnown RBP26.06■■□□□ 1.76
CHRD-213ENST00000482014 SPAG9O60271 1321 aaKnown RBP26.06■■□□□ 1.76
CHRD-213ENST00000482014 EHMT2Q96KQ7 1210 aa26.05■■□□□ 1.76
CHRD-213ENST00000482014 SAMD9LQ8IVG5 1584 aa26.03■■□□□ 1.76
CHRD-213ENST00000482014 ARHGAP35Q9NRY4 1499 aa26.03■■□□□ 1.76
CHRD-213ENST00000482014 SHANK2Q9UPX8 1470 aa26.02■■□□□ 1.76
CHRD-213ENST00000482014 CLTCQ00610 1675 aaKnown RBP26.02■■□□□ 1.76
CHRD-213ENST00000482014 A2ML1A8K2U0 1454 aa26.01■■□□□ 1.75
CHRD-213ENST00000482014 GGT6Q6P531 493 aa25.99■■□□□ 1.75
CHRD-213ENST00000482014 A2MP01023 1474 aa25.97■■□□□ 1.75
CHRD-213ENST00000482014 ZNF777Q9ULD5 760 aaPredicted RBP25.96■■□□□ 1.75
CHRD-213ENST00000482014 DNMT1P26358 1616 aaKnown RBP25.95■■□□□ 1.74
CHRD-213ENST00000482014 PLXNC1O60486 1568 aa25.95■■□□□ 1.74
CHRD-213ENST00000482014 CCDC18Q5T9S5 1454 aa25.94■■□□□ 1.74
CHRD-213ENST00000482014 ATP7AQ04656 1500 aa25.93■■□□□ 1.74
CHRD-213ENST00000482014 SYCP2Q9BX26 1530 aa25.92■■□□□ 1.74
CHRD-213ENST00000482014 HNRNPMP52272 730 aaKnown RBP eCLIP25.91■■□□□ 1.74
CHRD-213ENST00000482014 ANKLE2Q86XL3 938 aa25.9■■□□□ 1.74
CHRD-213ENST00000482014 CDC42BPAQ5VT25 1732 aa25.9■■□□□ 1.74
CHRD-213ENST00000482014 LRRIQ1Q96JM4 1722 aa25.9■■□□□ 1.74
CHRD-213ENST00000482014 KIAA1107Q9UPP5 1409 aa25.89■■□□□ 1.74
CHRD-213ENST00000482014 NEURL4Q96JN8 1562 aa25.89■■□□□ 1.73
CHRD-213ENST00000482014 POLR1AO95602 1720 aaPredicted RBP25.88■■□□□ 1.73
CHRD-213ENST00000482014 PLEKHH2Q8IVE3 1493 aa25.88■■□□□ 1.73
CHRD-213ENST00000482014 TNRQ92752 1358 aa25.85■■□□□ 1.73
CHRD-213ENST00000482014 CASKIN1Q8WXD9 1431 aa25.85■■□□□ 1.73
CHRD-213ENST00000482014 INO80Q9ULG1 1556 aaPredicted RBP25.85■■□□□ 1.73
CHRD-213ENST00000482014 THEMISQ8N1K5 641 aaPredicted RBP25.84■■□□□ 1.73
CHRD-213ENST00000482014 ALKQ9UM73 1620 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms