RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 IFFO2Q5TF58 517 aa12.11□□□□□ -0.47
COPA-204ENST00000481522 MICALL2Q8IY33 904 aa12.1□□□□□ -0.47
COPA-204ENST00000481522 A0A0G2JS52 829 aa12.06□□□□□ -0.48
COPA-204ENST00000481522 Q6ZNB5 142 aa12.04□□□□□ -0.48
COPA-204ENST00000481522 HRO43593 1189 aa12.03□□□□□ -0.48
COPA-204ENST00000481522 GSE1Q14687 1217 aa12□□□□□ -0.49
COPA-204ENST00000481522 KCTD12Q96CX2 325 aaKnown RBP12□□□□□ -0.49
COPA-204ENST00000481522 LCE2BO14633 110 aa11.98□□□□□ -0.49
COPA-204ENST00000481522 NUDT7P0C024 238 aa11.96□□□□□ -0.49
COPA-204ENST00000481522 LHX6Q9UPM6 363 aa11.96□□□□□ -0.49
COPA-204ENST00000481522 TK2O00142 265 aa11.94□□□□□ -0.5
COPA-204ENST00000481522 ARHGAP33O14559 1287 aa11.92□□□□□ -0.5
COPA-204ENST00000481522 EFCAB3Q8N7B9 438 aa11.89□□□□□ -0.51
COPA-204ENST00000481522 DMRTA1Q5VZB9 504 aa11.88□□□□□ -0.51
COPA-204ENST00000481522 PTPN5P54829 565 aa11.83□□□□□ -0.52
COPA-204ENST00000481522 MS4A4AQ96JQ5 239 aa11.83□□□□□ -0.52
COPA-204ENST00000481522 FKBP8Q14318 412 aa11.81□□□□□ -0.52
COPA-204ENST00000481522 PSEN2P49810 448 aa11.78□□□□□ -0.52
COPA-204ENST00000481522 PCDHGA4Q9Y5G9 962 aa11.76□□□□□ -0.53
COPA-204ENST00000481522 TRAF7Q6Q0C0 670 aa11.74□□□□□ -0.53
COPA-204ENST00000481522 KIF3CO14782 793 aa11.7□□□□□ -0.54
COPA-204ENST00000481522 SLC34A2O95436 690 aa11.7□□□□□ -0.54
COPA-204ENST00000481522 THSD4Q6ZMP0 1018 aa11.69□□□□□ -0.54
COPA-204ENST00000481522 FBXO3Q9UK99 471 aa11.69□□□□□ -0.54
COPA-204ENST00000481522 PSDA5PKW4 1024 aaPredicted RBP11.68□□□□□ -0.54
COPA-204ENST00000481522 LAPTM4AQ15012 233 aa11.67□□□□□ -0.54
COPA-204ENST00000481522 STAC3Q96MF2 364 aa11.67□□□□□ -0.54
COPA-204ENST00000481522 KDM4FA0A1W2PPD8 638 aa11.64□□□□□ -0.55
COPA-204ENST00000481522 SOX12O15370 315 aa11.63□□□□□ -0.55
COPA-204ENST00000481522 PHF8Q9UPP1 1060 aa11.62□□□□□ -0.55
COPA-204ENST00000481522 C2orf72A6NCS6 295 aa11.61□□□□□ -0.55
COPA-204ENST00000481522 ZNF775Q96BV0 537 aaPredicted RBP11.61□□□□□ -0.55
COPA-204ENST00000481522 VPS9D1Q9Y2B5 631 aa11.6□□□□□ -0.55
COPA-204ENST00000481522 KLHL34Q8N239 644 aa11.59□□□□□ -0.55
COPA-204ENST00000481522 ITGBL1O95965 494 aaPredicted RBP11.58□□□□□ -0.56
COPA-204ENST00000481522 LOC100996750A0A140TA64 210 aa11.54□□□□□ -0.56
COPA-204ENST00000481522 KRTAP4-6Q9BYQ5 205 aa11.54□□□□□ -0.56
COPA-204ENST00000481522 GFRA3O60609 400 aa11.53□□□□□ -0.56
COPA-204ENST00000481522 VASPP50552 380 aaPredicted RBP11.53□□□□□ -0.56
COPA-204ENST00000481522 ZNF787Q6DD87 383 aa11.53□□□□□ -0.56
COPA-204ENST00000481522 BHMG1C9JSJ3 638 aaPredicted RBP11.5□□□□□ -0.57
COPA-204ENST00000481522 KCNK17Q96T54 332 aa11.5□□□□□ -0.57
COPA-204ENST00000481522 PPP4R3BQ5MIZ7 849 aa11.48□□□□□ -0.57
COPA-204ENST00000481522 WNT2BQ93097 391 aa11.48□□□□□ -0.57
COPA-204ENST00000481522 SLC4A5Q9BY07 1137 aa11.44□□□□□ -0.58
COPA-204ENST00000481522 NRG2O14511 850 aaPredicted RBP11.43□□□□□ -0.58
COPA-204ENST00000481522 CIZ1Q9ULV3 898 aaPredicted RBP11.43□□□□□ -0.58
COPA-204ENST00000481522 FBXO22Q8NEZ5 403 aa11.42□□□□□ -0.58
COPA-204ENST00000481522 GOLGA8CPA6NN73 597 aa11.37□□□□□ -0.59
COPA-204ENST00000481522 PTCD2Q8WV60 388 aaKnown RBP11.37□□□□□ -0.59
COPA-204ENST00000481522 KCNH8Q96L42 1107 aa11.37□□□□□ -0.59
COPA-204ENST00000481522 NLRP6P59044 892 aa11.34□□□□□ -0.59
COPA-204ENST00000481522 SPOCK2Q92563 424 aa11.34□□□□□ -0.59
COPA-204ENST00000481522 MRPL50Q8N5N7 158 aaKnown RBP11.33□□□□□ -0.6
COPA-204ENST00000481522 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.31□□□□□ -0.6
COPA-204ENST00000481522 ZFP91Q96JP5 570 aaPredicted RBP11.31□□□□□ -0.6
COPA-204ENST00000481522 IFNLR1Q8IU57 520 aaPredicted RBP11.29□□□□□ -0.6
COPA-204ENST00000481522 ZBED2Q9BTP6 218 aa11.29□□□□□ -0.6
COPA-204ENST00000481522 LCE2AQ5TA79 106 aaPredicted RBP11.28□□□□□ -0.6
COPA-204ENST00000481522 KCNC4Q03721 635 aa11.27□□□□□ -0.61
COPA-204ENST00000481522 TMC2Q8TDI7 906 aa11.27□□□□□ -0.61
COPA-204ENST00000481522 BCL2L12Q9HB09 334 aa11.25□□□□□ -0.61
COPA-204ENST00000481522 RNF25Q96BH1 459 aaPredicted RBP11.22□□□□□ -0.61
COPA-204ENST00000481522 TRIM41Q8WV44 630 aa11.21□□□□□ -0.61
COPA-204ENST00000481522 MFRPQ9BY79 579 aa11.2□□□□□ -0.62
COPA-204ENST00000481522 PRKD2Q9BZL6 878 aa11.2□□□□□ -0.62
COPA-204ENST00000481522 NBPF3Q9H094 633 aa11.2□□□□□ -0.62
COPA-204ENST00000481522 RIOK3O14730 519 aaKnown RBP11.18□□□□□ -0.62
COPA-204ENST00000481522 BCAMP50895 628 aa11.18□□□□□ -0.62
COPA-204ENST00000481522 NYAP1Q6ZVC0 841 aa11.16□□□□□ -0.62
COPA-204ENST00000481522 ANKK1Q8NFD2 765 aa11.16□□□□□ -0.62
COPA-204ENST00000481522 VGFO15240 615 aaPredicted RBP11.15□□□□□ -0.62
COPA-204ENST00000481522 TREML4Q6UXN2 200 aa11.15□□□□□ -0.62
COPA-204ENST00000481522 PTPREP23469 700 aa11.13□□□□□ -0.63
COPA-204ENST00000481522 ZNF454Q8N9F8 522 aa11.13□□□□□ -0.63
COPA-204ENST00000481522 SOWAHBA6NEL2 793 aa11.11□□□□□ -0.63
COPA-204ENST00000481522 POTECB2RU33 542 aa11.11□□□□□ -0.63
COPA-204ENST00000481522 WBP1LQ9NX94 342 aa11.1□□□□□ -0.63
COPA-204ENST00000481522 V9GY48 417 aaPredicted RBP11.1□□□□□ -0.63
COPA-204ENST00000481522 PDZRN3Q9UPQ7 1066 aa11.09□□□□□ -0.63
COPA-204ENST00000481522 STK17AQ9UEE5 414 aa11.07□□□□□ -0.64
COPA-204ENST00000481522 TBC1D12O60347 775 aa11.06□□□□□ -0.64
COPA-204ENST00000481522 FOXK1P85037 733 aa11.06□□□□□ -0.64
COPA-204ENST00000481522 PLPP6Q8IY26 295 aa11.06□□□□□ -0.64
COPA-204ENST00000481522 FOSBP53539 338 aa11.05□□□□□ -0.64
COPA-204ENST00000481522 BCL11BQ9C0K0 894 aaPredicted RBP11.01□□□□□ -0.65
COPA-204ENST00000481522 RABGEF1Q9UJ41 708 aa11.01□□□□□ -0.65
COPA-204ENST00000481522 MYT1Q01538 1121 aa10.96□□□□□ -0.65
COPA-204ENST00000481522 LAPTM4BQ86VI4 370 aa10.96□□□□□ -0.65
COPA-204ENST00000481522 ADAM33Q9BZ11 813 aa10.96□□□□□ -0.65
COPA-204ENST00000481522 OXER1Q8TDS5 423 aa10.95□□□□□ -0.66
COPA-204ENST00000481522 ZFRQ96KR1 1074 aaKnown RBP10.95□□□□□ -0.66
COPA-204ENST00000481522 DSG2Q14126 1118 aa10.94□□□□□ -0.66
COPA-204ENST00000481522 PROX2Q3B8N5 592 aa10.94□□□□□ -0.66
COPA-204ENST00000481522 PPP1R18Q6NYC8 613 aa10.94□□□□□ -0.66
COPA-204ENST00000481522 PPP1R37O75864 691 aa10.91□□□□□ -0.66
COPA-204ENST00000481522 JPH4Q96JJ6 628 aa10.91□□□□□ -0.66
COPA-204ENST00000481522 STK24Q9Y6E0 443 aa10.91□□□□□ -0.66
COPA-204ENST00000481522 PPP1R3GB7ZBB8 358 aa10.89□□□□□ -0.67
COPA-204ENST00000481522 TJAP1Q5JTD0 557 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms