RNA–Protein interactions for RNA: ENST00000480420.5

CTPS1-209, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 750 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-209ENST00000480420 CLIP1P30622 1438 aa13.04□□□□□ -0.32
CTPS1-209ENST00000480420 BCORL1Q5H9F3 1711 aa13.03□□□□□ -0.32
CTPS1-209ENST00000480420 EFCAB2Q5VUJ9 269 aa13.03□□□□□ -0.32
CTPS1-209ENST00000480420 MADDQ8WXG6 1647 aa13.02□□□□□ -0.32
CTPS1-209ENST00000480420 SCAPERQ9BY12 1400 aa13.02□□□□□ -0.33
CTPS1-209ENST00000480420 LMTK3Q96Q04 1460 aa13.02□□□□□ -0.33
CTPS1-209ENST00000480420 ARHGAP5Q13017 1502 aa13.02□□□□□ -0.33
CTPS1-209ENST00000480420 PLCH2O75038 1416 aa13□□□□□ -0.33
CTPS1-209ENST00000480420 TROQ12816 1431 aaPredicted RBP13□□□□□ -0.33
CTPS1-209ENST00000480420 ZNF777Q9ULD5 760 aaPredicted RBP12.99□□□□□ -0.33
CTPS1-209ENST00000480420 ZFYVE16Q7Z3T8 1539 aa12.98□□□□□ -0.33
CTPS1-209ENST00000480420 ARHGEF40Q8TER5 1519 aa12.98□□□□□ -0.33
CTPS1-209ENST00000480420 CASKIN1Q8WXD9 1431 aa12.98□□□□□ -0.33
CTPS1-209ENST00000480420 RIMS1Q86UR5 1692 aaKnown RBP12.98□□□□□ -0.33
CTPS1-209ENST00000480420 CCDC18Q5T9S5 1454 aa12.97□□□□□ -0.33
CTPS1-209ENST00000480420 YEATS2Q9ULM3 1422 aa12.97□□□□□ -0.33
CTPS1-209ENST00000480420 CDC42BPBQ9Y5S2 1711 aa12.96□□□□□ -0.34
CTPS1-209ENST00000480420 AFAP1Q8N556 730 aa12.95□□□□□ -0.34
CTPS1-209ENST00000480420 POGZQ7Z3K3 1410 aa12.95□□□□□ -0.34
CTPS1-209ENST00000480420 FYCO1Q9BQS8 1478 aa12.94□□□□□ -0.34
CTPS1-209ENST00000480420 ZMYM4Q5VZL5 1548 aa12.93□□□□□ -0.34
CTPS1-209ENST00000480420 CDC42BPAQ5VT25 1732 aa12.92□□□□□ -0.34
CTPS1-209ENST00000480420 SIGLEC1Q9BZZ2 1709 aa12.92□□□□□ -0.34
CTPS1-209ENST00000480420 FER1L4A9Z1Z3 1794 aa12.92□□□□□ -0.34
CTPS1-209ENST00000480420 PREX2Q70Z35 1606 aa12.91□□□□□ -0.34
CTPS1-209ENST00000480420 LOC105371045A0A1W2PR82 267 aa12.91□□□□□ -0.34
CTPS1-209ENST00000480420 MAGI2Q86UL8 1455 aa12.91□□□□□ -0.34
CTPS1-209ENST00000480420 HSPA2P54652 639 aa12.9□□□□□ -0.34
CTPS1-209ENST00000480420 MTUS2Q5JR59 1369 aa12.9□□□□□ -0.34
CTPS1-209ENST00000480420 ZNF518AQ6AHZ1 1483 aa12.9□□□□□ -0.34
CTPS1-209ENST00000480420 ATP10AO60312 1499 aa12.89□□□□□ -0.35
CTPS1-209ENST00000480420 CEP162Q5TB80 1403 aa12.88□□□□□ -0.35
CTPS1-209ENST00000480420 ESF1Q9H501 851 aaKnown RBP12.88□□□□□ -0.35
CTPS1-209ENST00000480420 ITSN2Q9NZM3 1697 aa12.88□□□□□ -0.35
CTPS1-209ENST00000480420 C9orf84Q5VXU9 1444 aa12.88□□□□□ -0.35
CTPS1-209ENST00000480420 CCNB3Q8WWL7 1395 aa12.87□□□□□ -0.35
CTPS1-209ENST00000480420 HNRNPMP52272 730 aaKnown RBP eCLIP12.87□□□□□ -0.351e-8■■■■■ 50.4
CTPS1-209ENST00000480420 CFDP1Q9UEE9 299 aaPredicted RBP12.87□□□□□ -0.35
CTPS1-209ENST00000480420 FOXD1Q16676 465 aa12.86□□□□□ -0.35
CTPS1-209ENST00000480420 TRAPPC8Q9Y2L5 1435 aa12.86□□□□□ -0.35
CTPS1-209ENST00000480420 ABCC1P33527 1531 aa12.85□□□□□ -0.35
CTPS1-209ENST00000480420 CEBPAP49715 358 aaPredicted RBP12.85□□□□□ -0.35
CTPS1-209ENST00000480420 CERKQ8TCT0 537 aa12.85□□□□□ -0.35
CTPS1-209ENST00000480420 ARHGEF12Q9NZN5 1544 aa12.84□□□□□ -0.35
CTPS1-209ENST00000480420 DIP2CQ9Y2E4 1556 aa12.83□□□□□ -0.36
CTPS1-209ENST00000480420 ILDR2Q71H61 639 aa12.83□□□□□ -0.36
CTPS1-209ENST00000480420 ABCA6Q8N139 1617 aa12.83□□□□□ -0.36
CTPS1-209ENST00000480420 SYCP2Q9BX26 1530 aa12.83□□□□□ -0.36
CTPS1-209ENST00000480420 KDM5CP41229 1560 aa12.82□□□□□ -0.36
CTPS1-209ENST00000480420 SAMD9LQ8IVG5 1584 aa12.82□□□□□ -0.36
CTPS1-209ENST00000480420 SPAG9O60271 1321 aaKnown RBP12.82□□□□□ -0.36
CTPS1-209ENST00000480420 GPATCH8Q9UKJ3 1502 aaKnown RBP12.82□□□□□ -0.36
CTPS1-209ENST00000480420 SUPT6HQ7KZ85 1726 aaKnown RBP12.81□□□□□ -0.36
CTPS1-209ENST00000480420 DISP3Q9P2K9 1392 aa12.81□□□□□ -0.36
CTPS1-209ENST00000480420 KIDINS220Q9ULH0 1771 aa12.8□□□□□ -0.36
CTPS1-209ENST00000480420 PREX1Q8TCU6 1659 aa12.8□□□□□ -0.36
CTPS1-209ENST00000480420 ZNF644Q9H582 1327 aaPredicted RBP12.79□□□□□ -0.36
CTPS1-209ENST00000480420 MLH3Q9UHC1 1453 aa12.78□□□□□ -0.36
CTPS1-209ENST00000480420 EHBP1L1Q8N3D4 1523 aa12.78□□□□□ -0.36
CTPS1-209ENST00000480420 SOCS7O14512 581 aa12.78□□□□□ -0.36
CTPS1-209ENST00000480420 STRCQ7RTU9 1775 aa12.78□□□□□ -0.36
CTPS1-209ENST00000480420 TIAM1Q13009 1591 aa12.77□□□□□ -0.37
CTPS1-209ENST00000480420 SPATA31D1Q6ZQQ2 1576 aa12.77□□□□□ -0.37
CTPS1-209ENST00000480420 PLEKHH2Q8IVE3 1493 aa12.76□□□□□ -0.37
CTPS1-209ENST00000480420 ATP7AQ04656 1500 aa12.75□□□□□ -0.37
CTPS1-209ENST00000480420 GGT6Q6P531 493 aa12.75□□□□□ -0.37
CTPS1-209ENST00000480420 C3P01024 1663 aa12.74□□□□□ -0.37
CTPS1-209ENST00000480420 APLP2Q06481 763 aa12.74□□□□□ -0.37
CTPS1-209ENST00000480420 NCOA2Q15596 1464 aa12.72□□□□□ -0.37
CTPS1-209ENST00000480420 REREQ9P2R6 1566 aa12.72□□□□□ -0.37
CTPS1-209ENST00000480420 VPS8Q8N3P4 1428 aa12.71□□□□□ -0.37
CTPS1-209ENST00000480420 KIAA1107Q9UPP5 1409 aa12.71□□□□□ -0.37
CTPS1-209ENST00000480420 SETD1BQ9UPS6 1966 aaKnown RBP12.71□□□□□ -0.37
CTPS1-209ENST00000480420 UHRF1BP1Q6BDS2 1440 aa12.71□□□□□ -0.38
CTPS1-209ENST00000480420 CLTCQ00610 1675 aaKnown RBP12.7□□□□□ -0.38
CTPS1-209ENST00000480420 INO80Q9ULG1 1556 aaPredicted RBP12.7□□□□□ -0.38
CTPS1-209ENST00000480420 AGLP35573 1532 aa12.7□□□□□ -0.38
CTPS1-209ENST00000480420 A2MP01023 1474 aa12.7□□□□□ -0.38
CTPS1-209ENST00000480420 ADGBQ8N7X0 1667 aa12.7□□□□□ -0.38
CTPS1-209ENST00000480420 CAMSAP2Q08AD1 1489 aa12.68□□□□□ -0.38
CTPS1-209ENST00000480420 KANK4Q5T7N3 995 aaPredicted RBP12.68□□□□□ -0.38
CTPS1-209ENST00000480420 TSPY4P0CV99 314 aa12.67□□□□□ -0.38
CTPS1-209ENST00000480420 TSPY10P0CW01 314 aa12.67□□□□□ -0.38
CTPS1-209ENST00000480420 LRRC9Q6ZRR7 1453 aa12.66□□□□□ -0.38
CTPS1-209ENST00000480420 CNTLNQ9NXG0 1405 aa12.66□□□□□ -0.38
CTPS1-209ENST00000480420 KIF3BO15066 747 aa12.66□□□□□ -0.38
CTPS1-209ENST00000480420 ZMYM3Q14202 1370 aa12.66□□□□□ -0.38
CTPS1-209ENST00000480420 LTBP4Q8N2S1 1624 aa12.65□□□□□ -0.38
CTPS1-209ENST00000480420 CCDC141Q6ZP82 1450 aa12.65□□□□□ -0.38
CTPS1-209ENST00000480420 MBD5Q9P267 1494 aa12.65□□□□□ -0.38
CTPS1-209ENST00000480420 DMRT2Q9Y5R5 561 aa12.64□□□□□ -0.39
CTPS1-209ENST00000480420 MROH2AA6NES4 1674 aa12.63□□□□□ -0.39
CTPS1-209ENST00000480420 PTPRTO14522 1441 aa12.62□□□□□ -0.39
CTPS1-209ENST00000480420 PLXNC1O60486 1568 aa12.62□□□□□ -0.39
CTPS1-209ENST00000480420 RSPH4AQ5TD94 716 aa12.61□□□□□ -0.39
CTPS1-209ENST00000480420 WASHC2CQ9Y4E1 1318 aa12.61□□□□□ -0.39
CTPS1-209ENST00000480420 DHX29Q7Z478 1369 aaKnown RBP12.6□□□□□ -0.39
CTPS1-209ENST00000480420 RTEL1-TNFRSF6BF6WH68 1400 aa12.6□□□□□ -0.39
CTPS1-209ENST00000480420 IQSEC2Q5JU85 1478 aa12.59□□□□□ -0.39
CTPS1-209ENST00000480420 CFAP65Q6ZU64 1925 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms