RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 HSP90B1P14625 803 aaKnown RBP11.5□□□□□ -0.57
TTC3-216ENST00000479930 R3HCC1Q9Y3T6 440 aaKnown RBP11.49□□□□□ -0.57
TTC3-216ENST00000479930 BBXQ8WY36 941 aaPredicted RBP11.49□□□□□ -0.57
TTC3-216ENST00000479930 CBX1P83916 185 aa11.49□□□□□ -0.57
TTC3-216ENST00000479930 MYCNP04198 464 aaPredicted RBP11.47□□□□□ -0.57
TTC3-216ENST00000479930 CCDC180Q9P1Z9 1646 aa11.47□□□□□ -0.57
TTC3-216ENST00000479930 CSRNP3Q8WYN3 585 aa11.46□□□□□ -0.57
TTC3-216ENST00000479930 SLC4A3P48751 1232 aa11.46□□□□□ -0.58
TTC3-216ENST00000479930 CCDC43Q96MW1 224 aaKnown RBP11.46□□□□□ -0.58
TTC3-216ENST00000479930 CFAP53Q96M91 514 aa11.45□□□□□ -0.58
TTC3-216ENST00000479930 FTSJ3Q8IY81 847 aaKnown RBP11.45□□□□□ -0.58
TTC3-216ENST00000479930 MAPK8IP3Q9UPT6 1336 aa11.44□□□□□ -0.58
TTC3-216ENST00000479930 NOL10Q9BSC4 688 aaKnown RBP11.44□□□□□ -0.58
TTC3-216ENST00000479930 PES1O00541 588 aaKnown RBP11.43□□□□□ -0.58
TTC3-216ENST00000479930 RSPH4AQ5TD94 716 aa11.43□□□□□ -0.58
TTC3-216ENST00000479930 CHIC2Q9UKJ5 165 aa11.43□□□□□ -0.58
TTC3-216ENST00000479930 MIER1Q8N108 512 aa11.42□□□□□ -0.58
TTC3-216ENST00000479930 TSPY4P0CV99 314 aa11.41□□□□□ -0.58
TTC3-216ENST00000479930 TSPY10P0CW01 314 aa11.41□□□□□ -0.58
TTC3-216ENST00000479930 CA8P35219 290 aa11.41□□□□□ -0.58
TTC3-216ENST00000479930 SYTL4Q96C24 671 aaPredicted RBP11.4□□□□□ -0.58
TTC3-216ENST00000479930 DHX16O60231 1041 aaKnown RBP11.4□□□□□ -0.58
TTC3-216ENST00000479930 GRM1Q13255 1194 aa11.4□□□□□ -0.58
TTC3-216ENST00000479930 RTF1Q92541 710 aaKnown RBP11.4□□□□□ -0.58
TTC3-216ENST00000479930 HDGFP51858 240 aaKnown RBP11.4□□□□□ -0.58
TTC3-216ENST00000479930 RFX1P22670 979 aa11.39□□□□□ -0.59
TTC3-216ENST00000479930 U2SURPO15042 1029 aaKnown RBP11.38□□□□□ -0.59
TTC3-216ENST00000479930 AMOTL1Q8IY63 956 aa11.37□□□□□ -0.59
TTC3-216ENST00000479930 TPM4P67936 248 aa11.37□□□□□ -0.59
TTC3-216ENST00000479930 BECN1Q14457 450 aa11.37□□□□□ -0.59
TTC3-216ENST00000479930 RGL3Q3MIN7 710 aa11.36□□□□□ -0.59
TTC3-216ENST00000479930 ODF2Q5BJF6 829 aa11.36□□□□□ -0.59
TTC3-216ENST00000479930 CALRP27797 417 aaKnown RBP11.35□□□□□ -0.59
TTC3-216ENST00000479930 ZFYVE27Q5T4F4 411 aa11.35□□□□□ -0.59
TTC3-216ENST00000479930 IPO9Q96P70 1041 aaKnown RBP11.35□□□□□ -0.59
TTC3-216ENST00000479930 APBB1O00213 710 aa11.35□□□□□ -0.59
TTC3-216ENST00000479930 CHMP4BP1P59074 171 aa11.35□□□□□ -0.59
TTC3-216ENST00000479930 KAT6BQ8WYB5 2073 aa11.34□□□□□ -0.59
TTC3-216ENST00000479930 CCDC136Q96JN2 1154 aa11.34□□□□□ -0.59
TTC3-216ENST00000479930 C16orf71Q8IYS4 520 aaPredicted RBP11.34□□□□□ -0.59
TTC3-216ENST00000479930 SENP3-EIF4A1A0A087X0R7 540 aa11.33□□□□□ -0.6
TTC3-216ENST00000479930 HSP90AB1P08238 724 aaKnown RBP11.33□□□□□ -0.6
TTC3-216ENST00000479930 SAFB2Q14151 953 aaKnown RBP eCLIP11.33□□□□□ -0.6
TTC3-216ENST00000479930 NUDCQ9Y266 331 aa11.32□□□□□ -0.6
TTC3-216ENST00000479930 SEPT11Q9NVA2 429 aaKnown RBP11.32□□□□□ -0.6
TTC3-216ENST00000479930 DDRGK1Q96HY6 314 aa11.32□□□□□ -0.6
TTC3-216ENST00000479930 ZNF710Q8N1W2 664 aa11.32□□□□□ -0.6
TTC3-216ENST00000479930 APPP05067 770 aa11.31□□□□□ -0.6
TTC3-216ENST00000479930 GOLGA6L1Q8N7Z2 621 aa11.31□□□□□ -0.6
TTC3-216ENST00000479930 RBM19Q9Y4C8 960 aaKnown RBP11.31□□□□□ -0.6
TTC3-216ENST00000479930 TPD52L1Q16890 204 aaPredicted RBP11.3□□□□□ -0.6
TTC3-216ENST00000479930 IKQ13123 557 aaPredicted RBP11.3□□□□□ -0.6
TTC3-216ENST00000479930 RBM33Q96EV2 1170 aaKnown RBP11.3□□□□□ -0.6
TTC3-216ENST00000479930 HRCP23327 699 aa11.3□□□□□ -0.6
TTC3-216ENST00000479930 CT47A1Q5JQC4 288 aaPredicted RBP11.3□□□□□ -0.6
TTC3-216ENST00000479930 FOXD4L1Q9NU39 408 aa11.29□□□□□ -0.6
TTC3-216ENST00000479930 PODXL2Q9NZ53 605 aa11.29□□□□□ -0.6
TTC3-216ENST00000479930 HNRNPUQ00839 825 aaKnown RBP eCLIP11.29□□□□□ -0.6
TTC3-216ENST00000479930 ZMYND15Q9H091 742 aa11.29□□□□□ -0.6
TTC3-216ENST00000479930 VPS37DQ86XT2 251 aa11.28□□□□□ -0.6
TTC3-216ENST00000479930 WDHD1O75717 1129 aaPredicted RBP11.28□□□□□ -0.6
TTC3-216ENST00000479930 MCCP23508 829 aa11.28□□□□□ -0.6
TTC3-216ENST00000479930 CRBNQ96SW2 442 aa11.28□□□□□ -0.6
TTC3-216ENST00000479930 KIAA1211Q6ZU35 1233 aa11.27□□□□□ -0.61
TTC3-216ENST00000479930 PCMTD1Q96MG8 357 aaPredicted RBP11.27□□□□□ -0.61
TTC3-216ENST00000479930 NEBLO76041 1014 aa11.27□□□□□ -0.61
TTC3-216ENST00000479930 NOP2P46087 812 aaKnown RBP11.27□□□□□ -0.61
TTC3-216ENST00000479930 FRAT1Q92837 279 aaPredicted RBP11.27□□□□□ -0.61
TTC3-216ENST00000479930 UQCRHLA0A096LP55 91 aa11.26□□□□□ -0.61
TTC3-216ENST00000479930 TPM3P06753 285 aa11.26□□□□□ -0.61
TTC3-216ENST00000479930 CCDC34Q96HJ3 373 aa11.26□□□□□ -0.61
TTC3-216ENST00000479930 LTV1Q96GA3 475 aaPredicted RBP11.25□□□□□ -0.61
TTC3-216ENST00000479930 KCNA4P22459 653 aa11.25□□□□□ -0.61
TTC3-216ENST00000479930 STK26Q9P289 416 aa11.25□□□□□ -0.61
TTC3-216ENST00000479930 TPM2P07951 284 aa11.25□□□□□ -0.61
TTC3-216ENST00000479930 GTF3C3Q9Y5Q9 886 aa11.25□□□□□ -0.61
TTC3-216ENST00000479930 AKAP17AQ02040 695 aaKnown RBP11.24□□□□□ -0.61
TTC3-216ENST00000479930 TTLL12Q14166 644 aaPredicted RBP11.24□□□□□ -0.61
TTC3-216ENST00000479930 WDR78Q5VTH9 848 aa11.24□□□□□ -0.61
TTC3-216ENST00000479930 IL27Q8NEV9 243 aa11.24□□□□□ -0.61
TTC3-216ENST00000479930 MPHOSPH10O00566 681 aaKnown RBP11.23□□□□□ -0.61
TTC3-216ENST00000479930 PIP4K2BP78356 416 aa11.23□□□□□ -0.61
TTC3-216ENST00000479930 MTMR7Q9Y216 660 aa11.23□□□□□ -0.61
TTC3-216ENST00000479930 UQCRHP07919 91 aa11.23□□□□□ -0.61
TTC3-216ENST00000479930 NAP1L5Q96NT1 182 aaPredicted RBP11.23□□□□□ -0.61
TTC3-216ENST00000479930 NGEFQ8N5V2 710 aa11.23□□□□□ -0.61
TTC3-216ENST00000479930 NUTM2BA6NNL0 878 aaPredicted RBP11.22□□□□□ -0.61
TTC3-216ENST00000479930 NUTM2EB1AL46 878 aaPredicted RBP11.22□□□□□ -0.61
TTC3-216ENST00000479930 NUTM2AQ8IVF1 878 aaPredicted RBP11.22□□□□□ -0.61
TTC3-216ENST00000479930 TONSLQ96HA7 1378 aa11.21□□□□□ -0.61
TTC3-216ENST00000479930 FYB1O15117 783 aa11.21□□□□□ -0.62
TTC3-216ENST00000479930 TNNT3P45378 269 aaPredicted RBP11.2□□□□□ -0.62
TTC3-216ENST00000479930 HSP90AB2PQ58FF8 381 aa11.2□□□□□ -0.62
TTC3-216ENST00000479930 HOMER1Q86YM7 354 aa11.2□□□□□ -0.62
TTC3-216ENST00000479930 TSR1Q2NL82 804 aaKnown RBP11.19□□□□□ -0.62
TTC3-216ENST00000479930 TTC16Q8NEE8 873 aa11.19□□□□□ -0.62
TTC3-216ENST00000479930 LOC105371045A0A1W2PR82 267 aa11.19□□□□□ -0.62
TTC3-216ENST00000479930 HMGN5P82970 282 aaKnown RBP11.19□□□□□ -0.62
TTC3-216ENST00000479930 ARID3AQ99856 593 aa11.18□□□□□ -0.62
TTC3-216ENST00000479930 PSMD1Q99460 953 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms