RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 KRI1Q8N9T8 703 aaKnown RBP13.8□□□□□ -0.2
GAPVD1-217ENST00000479511 KDM4CQ9H3R0 1056 aa13.8□□□□□ -0.2
GAPVD1-217ENST00000479511 PAK3O75914 559 aaPredicted RBP13.77□□□□□ -0.21
GAPVD1-217ENST00000479511 UBTFP17480 764 aaKnown RBP13.77□□□□□ -0.21
GAPVD1-217ENST00000479511 ZMYND15Q9H091 742 aa13.77□□□□□ -0.21
GAPVD1-217ENST00000479511 TRIM66O15016 1216 aa13.76□□□□□ -0.21
GAPVD1-217ENST00000479511 GABBR2O75899 941 aa13.76□□□□□ -0.21
GAPVD1-217ENST00000479511 PDE4DQ08499 809 aa13.73□□□□□ -0.21
GAPVD1-217ENST00000479511 PPP1R15BQ5SWA1 713 aa13.69□□□□□ -0.22
GAPVD1-217ENST00000479511 RSPH6AQ9H0K4 717 aa13.69□□□□□ -0.22
GAPVD1-217ENST00000479511 PODXL2Q9NZ53 605 aa13.68□□□□□ -0.22
GAPVD1-217ENST00000479511 DPYSL4O14531 572 aa13.67□□□□□ -0.22
GAPVD1-217ENST00000479511 EMILIN3Q9NT22 766 aa13.67□□□□□ -0.22
GAPVD1-217ENST00000479511 ZRANB1Q9UGI0 708 aa13.67□□□□□ -0.22
GAPVD1-217ENST00000479511 GPR37O15354 613 aa13.65□□□□□ -0.22
GAPVD1-217ENST00000479511 PHF12Q96QT6 1004 aa13.65□□□□□ -0.22
GAPVD1-217ENST00000479511 TMEM106CQ9BVX2 250 aa13.65□□□□□ -0.22
GAPVD1-217ENST00000479511 GOLGA2Q08379 1002 aa13.63□□□□□ -0.23
GAPVD1-217ENST00000479511 FAM117AQ9C073 453 aa13.63□□□□□ -0.23
GAPVD1-217ENST00000479511 GPHNQ9NQX3 736 aaPredicted RBP13.63□□□□□ -0.23
GAPVD1-217ENST00000479511 TRPC6Q9Y210 931 aa13.63□□□□□ -0.23
GAPVD1-217ENST00000479511 MKRN3Q13064 507 aaKnown RBP13.62□□□□□ -0.23
GAPVD1-217ENST00000479511 PDIA6Q15084 440 aa13.61□□□□□ -0.23
GAPVD1-217ENST00000479511 CLCN6P51797 869 aa13.6□□□□□ -0.23
GAPVD1-217ENST00000479511 SPDYE16A6NNV3 312 aaPredicted RBP13.59□□□□□ -0.23
GAPVD1-217ENST00000479511 C1orf115Q9H7X2 142 aa13.58□□□□□ -0.24
GAPVD1-217ENST00000479511 PLEKHG3A1L390 1219 aa13.57□□□□□ -0.24
GAPVD1-217ENST00000479511 DSG2Q14126 1118 aa13.56□□□□□ -0.24
GAPVD1-217ENST00000479511 ZNF316A6NFI3 1004 aaPredicted RBP13.55□□□□□ -0.24
GAPVD1-217ENST00000479511 TRIM26Q12899 539 aaPredicted RBP13.54□□□□□ -0.24
GAPVD1-217ENST00000479511 ILDR1Q86SU0 546 aaPredicted RBP13.54□□□□□ -0.24
GAPVD1-217ENST00000479511 ARID3AQ99856 593 aa13.53□□□□□ -0.24
GAPVD1-217ENST00000479511 MINK1Q8N4C8 1332 aaPredicted RBP13.5□□□□□ -0.25
GAPVD1-217ENST00000479511 CCDC102AQ96A19 550 aa13.5□□□□□ -0.25
GAPVD1-217ENST00000479511 MS4A3Q96HJ5 214 aa13.5□□□□□ -0.25
GAPVD1-217ENST00000479511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.48□□□□□ -0.251e-7■□□□□ 9.8
GAPVD1-217ENST00000479511 MAP2K5Q13163 448 aa13.47□□□□□ -0.25
GAPVD1-217ENST00000479511 DPY19L2Q6NUT2 758 aa13.47□□□□□ -0.25
GAPVD1-217ENST00000479511 PARP9Q8IXQ6 854 aa13.47□□□□□ -0.25
GAPVD1-217ENST00000479511 DCBLD2Q96PD2 775 aa13.47□□□□□ -0.25
GAPVD1-217ENST00000479511 IRF6O14896 467 aa13.46□□□□□ -0.25
GAPVD1-217ENST00000479511 HRCP23327 699 aa13.46□□□□□ -0.25
GAPVD1-217ENST00000479511 DDRGK1Q96HY6 314 aa13.46□□□□□ -0.25
GAPVD1-217ENST00000479511 NUTM2FA1L443 756 aa13.45□□□□□ -0.26
GAPVD1-217ENST00000479511 ARID3CA6NKF2 412 aa13.45□□□□□ -0.26
GAPVD1-217ENST00000479511 AMHR2Q16671 573 aa13.45□□□□□ -0.26
GAPVD1-217ENST00000479511 GRXCR2A6NFK2 248 aa13.44□□□□□ -0.26
GAPVD1-217ENST00000479511 FOXK1P85037 733 aa13.44□□□□□ -0.26
GAPVD1-217ENST00000479511 GALR2O43603 387 aaPredicted RBP13.43□□□□□ -0.26
GAPVD1-217ENST00000479511 POTEIP0CG38 1075 aa13.43□□□□□ -0.26
GAPVD1-217ENST00000479511 MICALL2Q8IY33 904 aa13.42□□□□□ -0.26
GAPVD1-217ENST00000479511 TTLL13PA6NNM8 815 aa13.41□□□□□ -0.26
GAPVD1-217ENST00000479511 FECHP22830 423 aa13.41□□□□□ -0.26
GAPVD1-217ENST00000479511 PLPP6Q8IY26 295 aa13.4□□□□□ -0.26
GAPVD1-217ENST00000479511 TMC2Q8TDI7 906 aa13.4□□□□□ -0.26
GAPVD1-217ENST00000479511 APBB1O00213 710 aa13.39□□□□□ -0.27
GAPVD1-217ENST00000479511 OSBPP22059 807 aa13.39□□□□□ -0.27
GAPVD1-217ENST00000479511 GNPATO15228 680 aa13.38□□□□□ -0.27
GAPVD1-217ENST00000479511 ONECUT3O60422 494 aaPredicted RBP13.38□□□□□ -0.27
GAPVD1-217ENST00000479511 TIE1P35590 1138 aa13.38□□□□□ -0.27
GAPVD1-217ENST00000479511 FLIIQ13045 1269 aa13.38□□□□□ -0.27
GAPVD1-217ENST00000479511 BMP2KQ9NSY1 1161 aaPredicted RBP13.34□□□□□ -0.27
GAPVD1-217ENST00000479511 C2orf72A6NCS6 295 aa13.33□□□□□ -0.28
GAPVD1-217ENST00000479511 MAP3K9P80192 1104 aa13.33□□□□□ -0.28
GAPVD1-217ENST00000479511 LHX8Q68G74 356 aa13.33□□□□□ -0.28
GAPVD1-217ENST00000479511 HIC1Q14526 733 aa13.32□□□□□ -0.28
GAPVD1-217ENST00000479511 GOPCQ9HD26 462 aa13.32□□□□□ -0.28
GAPVD1-217ENST00000479511 KIF3CO14782 793 aa13.31□□□□□ -0.28
GAPVD1-217ENST00000479511 FCHSD2O94868 740 aa13.31□□□□□ -0.28
GAPVD1-217ENST00000479511 PRIM1P49642 420 aaKnown RBP13.31□□□□□ -0.28
GAPVD1-217ENST00000479511 PDCD7Q8N8D1 485 aaKnown RBP13.3□□□□□ -0.28
GAPVD1-217ENST00000479511 CLUAP1Q96AJ1 413 aa13.3□□□□□ -0.28
GAPVD1-217ENST00000479511 TRIM35Q9UPQ4 493 aa13.3□□□□□ -0.28
GAPVD1-217ENST00000479511 MS4A1P11836 297 aa13.29□□□□□ -0.28
GAPVD1-217ENST00000479511 TTLL12Q14166 644 aaPredicted RBP13.29□□□□□ -0.28
GAPVD1-217ENST00000479511 UPF1Q92900 1129 aaKnown RBP eCLIP13.28□□□□□ -0.28
GAPVD1-217ENST00000479511 PTGER2P43116 358 aa13.27□□□□□ -0.29
GAPVD1-217ENST00000479511 DDX12PQ92771 950 aa13.27□□□□□ -0.29
GAPVD1-217ENST00000479511 REPIN1Q9BWE0 567 aaKnown RBP13.27□□□□□ -0.29
GAPVD1-217ENST00000479511 GIGYF2Q6Y7W6 1299 aaKnown RBP13.26□□□□□ -0.29
GAPVD1-217ENST00000479511 TMEM121BQ9BXQ6 578 aaPredicted RBP13.26□□□□□ -0.29
GAPVD1-217ENST00000479511 A6NJR5 290 aa13.25□□□□□ -0.29
GAPVD1-217ENST00000479511 TRAK2O60296 914 aa13.24□□□□□ -0.29
GAPVD1-217ENST00000479511 RANGAP1P46060 587 aaPredicted RBP13.24□□□□□ -0.29
GAPVD1-217ENST00000479511 OXER1Q8TDS5 423 aa13.23□□□□□ -0.29
GAPVD1-217ENST00000479511 PCMTD1Q96MG8 357 aaPredicted RBP13.23□□□□□ -0.29
GAPVD1-217ENST00000479511 PTGDRQ13258 359 aa13.22□□□□□ -0.29
GAPVD1-217ENST00000479511 CCDC82Q8N4S0 544 aa13.22□□□□□ -0.29
GAPVD1-217ENST00000479511 BOLA1Q9Y3E2 137 aa13.2□□□□□ -0.3
GAPVD1-217ENST00000479511 MCM6Q14566 821 aa13.18□□□□□ -0.3
GAPVD1-217ENST00000479511 IRX5P78411 483 aaPredicted RBP13.16□□□□□ -0.3
GAPVD1-217ENST00000479511 SH3D19Q5HYK7 790 aa13.16□□□□□ -0.3
GAPVD1-217ENST00000479511 TMEM92Q6UXU6 159 aa13.16□□□□□ -0.3
GAPVD1-217ENST00000479511 TMUB1Q9BVT8 246 aa13.16□□□□□ -0.3
GAPVD1-217ENST00000479511 PDIA4P13667 645 aaKnown RBP13.15□□□□□ -0.3
GAPVD1-217ENST00000479511 ATMINO43313 823 aaPredicted RBP13.14□□□□□ -0.31
GAPVD1-217ENST00000479511 ASTLQ6HA08 431 aaPredicted RBP13.14□□□□□ -0.31
GAPVD1-217ENST00000479511 NPM2Q86SE8 214 aaKnown RBP13.14□□□□□ -0.31
GAPVD1-217ENST00000479511 PELP1Q8IZL8 1130 aaKnown RBP13.14□□□□□ -0.31
GAPVD1-217ENST00000479511 EVI5O60447 810 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms