RNA–Protein interactions for RNA: ENST00000478954.1

STRADBP1-201, Transcript of STE20-related kinase adaptor beta pseudogene 1, humanhuman

BASIC

Gene STRADBP1, Length 1,281 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBP1-201ENST00000478954 CADPS2Q86UW7 1296 aa11.6□□□□□ -0.55
STRADBP1-201ENST00000478954 BOLA1Q9Y3E2 137 aa11.59□□□□□ -0.55
STRADBP1-201ENST00000478954 TMEM121BQ9BXQ6 578 aaPredicted RBP11.57□□□□□ -0.56
STRADBP1-201ENST00000478954 L3MBTL3Q96JM7 780 aaPredicted RBP11.55□□□□□ -0.56
STRADBP1-201ENST00000478954 TMEM92Q6UXU6 159 aa11.51□□□□□ -0.57
STRADBP1-201ENST00000478954 G3V3G9 751 aa11.5□□□□□ -0.57
STRADBP1-201ENST00000478954 MAMSTRQ6ZN01 415 aa11.5□□□□□ -0.57
STRADBP1-201ENST00000478954 SCUBE2Q9NQ36 999 aa11.49□□□□□ -0.57
STRADBP1-201ENST00000478954 NCKAP5LQ9HCH0 1330 aa11.48□□□□□ -0.57
STRADBP1-201ENST00000478954 C3orf67Q6ZVT6 689 aa11.45□□□□□ -0.58
STRADBP1-201ENST00000478954 CRISPLD2Q9H0B8 497 aa11.45□□□□□ -0.58
STRADBP1-201ENST00000478954 NBR1Q14596 966 aa11.44□□□□□ -0.58
STRADBP1-201ENST00000478954 KIF3CO14782 793 aa11.42□□□□□ -0.58
STRADBP1-201ENST00000478954 C2orf72A6NCS6 295 aa11.41□□□□□ -0.58
STRADBP1-201ENST00000478954 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.41□□□□□ -0.58
STRADBP1-201ENST00000478954 SLAIN1Q8ND83 568 aa11.39□□□□□ -0.59
STRADBP1-201ENST00000478954 LARP6Q9BRS8 491 aaKnown RBP11.38□□□□□ -0.59
STRADBP1-201ENST00000478954 GPHNQ9NQX3 736 aaPredicted RBP11.38□□□□□ -0.59
STRADBP1-201ENST00000478954 MFSD10Q14728 455 aa11.37□□□□□ -0.59
STRADBP1-201ENST00000478954 PDE4AP27815 886 aa11.36□□□□□ -0.59
STRADBP1-201ENST00000478954 DSG2Q14126 1118 aa11.36□□□□□ -0.59
STRADBP1-201ENST00000478954 TMC2Q8TDI7 906 aa11.36□□□□□ -0.59
STRADBP1-201ENST00000478954 FOXK1P85037 733 aa11.32□□□□□ -0.6
STRADBP1-201ENST00000478954 PPP1R15BQ5SWA1 713 aa11.32□□□□□ -0.6
STRADBP1-201ENST00000478954 DDX27Q96GQ7 796 aaKnown RBP11.32□□□□□ -0.6
STRADBP1-201ENST00000478954 TIMELESSQ9UNS1 1208 aa11.32□□□□□ -0.6
STRADBP1-201ENST00000478954 LCE2DQ5TA82 110 aaPredicted RBP11.29□□□□□ -0.6
STRADBP1-201ENST00000478954 PLPP6Q8IY26 295 aa11.29□□□□□ -0.6
STRADBP1-201ENST00000478954 FAM163AQ96GL9 167 aaPredicted RBP11.29□□□□□ -0.6
STRADBP1-201ENST00000478954 TULP1O00294 542 aaPredicted RBP11.26□□□□□ -0.61
STRADBP1-201ENST00000478954 WDR70Q9NW82 654 aa11.26□□□□□ -0.61
STRADBP1-201ENST00000478954 HOXB3P14651 431 aaPredicted RBP11.23□□□□□ -0.61
STRADBP1-201ENST00000478954 CAMK2BQ13554 666 aa11.23□□□□□ -0.61
STRADBP1-201ENST00000478954 KCNV2Q8TDN2 545 aa11.23□□□□□ -0.61
STRADBP1-201ENST00000478954 EMILIN3Q9NT22 766 aa11.22□□□□□ -0.61
STRADBP1-201ENST00000478954 GTF3C3Q9Y5Q9 886 aa11.22□□□□□ -0.61
STRADBP1-201ENST00000478954 E2F4Q16254 413 aa11.21□□□□□ -0.61
STRADBP1-201ENST00000478954 UPF1Q92900 1129 aaKnown RBP eCLIP11.18□□□□□ -0.62
STRADBP1-201ENST00000478954 CCDC180Q9P1Z9 1646 aa11.17□□□□□ -0.62
STRADBP1-201ENST00000478954 ST18O60284 1047 aa11.17□□□□□ -0.62
STRADBP1-201ENST00000478954 POTEMA6NI47 508 aa11.16□□□□□ -0.62
STRADBP1-201ENST00000478954 POTEGQ6S5H5 508 aa11.15□□□□□ -0.62
STRADBP1-201ENST00000478954 OXER1Q8TDS5 423 aa11.14□□□□□ -0.63
STRADBP1-201ENST00000478954 DPYSL4O14531 572 aa11.13□□□□□ -0.63
STRADBP1-201ENST00000478954 SLC34A2O95436 690 aa11.13□□□□□ -0.63
STRADBP1-201ENST00000478954 DOK7Q18PE1 504 aa11.12□□□□□ -0.63
STRADBP1-201ENST00000478954 PTCD2Q8WV60 388 aaKnown RBP11.12□□□□□ -0.63
STRADBP1-201ENST00000478954 KHSRPQ92945 711 aaKnown RBP eCLIP11.12□□□□□ -0.63
STRADBP1-201ENST00000478954 SNPHO15079 494 aa11.11□□□□□ -0.63
STRADBP1-201ENST00000478954 P3H3Q8IVL6 736 aa11.11□□□□□ -0.63
STRADBP1-201ENST00000478954 PCDHGA4Q9Y5G9 962 aa11.1□□□□□ -0.63
STRADBP1-201ENST00000478954 ARIH1Q9Y4X5 557 aaPredicted RBP11.09□□□□□ -0.63
STRADBP1-201ENST00000478954 ARSIQ5FYB1 569 aa11.08□□□□□ -0.64
STRADBP1-201ENST00000478954 GPR153Q6NV75 609 aa11.08□□□□□ -0.64
STRADBP1-201ENST00000478954 ARHGEF1Q92888 912 aaKnown RBP11.08□□□□□ -0.64
STRADBP1-201ENST00000478954 TMEM132AQ24JP5 1023 aa11.07□□□□□ -0.64
STRADBP1-201ENST00000478954 MARVELD3Q96A59 401 aa11.06□□□□□ -0.64
STRADBP1-201ENST00000478954 MAP3K9P80192 1104 aa11.05□□□□□ -0.64
STRADBP1-201ENST00000478954 ZNF710Q8N1W2 664 aa11.05□□□□□ -0.64
STRADBP1-201ENST00000478954 KDM4FA0A1W2PPD8 638 aa11.04□□□□□ -0.64
STRADBP1-201ENST00000478954 RIMBP2O15034 1052 aa11.03□□□□□ -0.64
STRADBP1-201ENST00000478954 NUDT7P0C024 238 aa11.03□□□□□ -0.64
STRADBP1-201ENST00000478954 PDIA6Q15084 440 aa11.03□□□□□ -0.64
STRADBP1-201ENST00000478954 ZSWIM6Q9HCJ5 1215 aa11.03□□□□□ -0.64
STRADBP1-201ENST00000478954 RB1CC1Q8TDY2 1594 aa11.03□□□□□ -0.64
STRADBP1-201ENST00000478954 EVI5O60447 810 aa11.02□□□□□ -0.65
STRADBP1-201ENST00000478954 HOXB1P14653 301 aaPredicted RBP11.01□□□□□ -0.65
STRADBP1-201ENST00000478954 TBC1D12O60347 775 aa11□□□□□ -0.65
STRADBP1-201ENST00000478954 SEMA3EO15041 775 aa10.99□□□□□ -0.65
STRADBP1-201ENST00000478954 SPDYE16A6NNV3 312 aaPredicted RBP10.96□□□□□ -0.65
STRADBP1-201ENST00000478954 MLLT3P42568 568 aaPredicted RBP10.96□□□□□ -0.65
STRADBP1-201ENST00000478954 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.96□□□□□ -0.65
STRADBP1-201ENST00000478954 ANO8Q9HCE9 1232 aaPredicted RBP10.96□□□□□ -0.65
STRADBP1-201ENST00000478954 PLSCR2Q9NRY7 297 aa10.96□□□□□ -0.65
STRADBP1-201ENST00000478954 POTEB3A0JP26 581 aa10.95□□□□□ -0.66
STRADBP1-201ENST00000478954 LMOD2Q6P5Q4 547 aa10.95□□□□□ -0.66
STRADBP1-201ENST00000478954 POTEBQ6S5H4 581 aa10.95□□□□□ -0.66
STRADBP1-201ENST00000478954 ERICH6Q7L0X2 663 aa10.95□□□□□ -0.66
STRADBP1-201ENST00000478954 EMP3P54852 163 aa10.94□□□□□ -0.66
STRADBP1-201ENST00000478954 LHX6Q9UPM6 363 aa10.94□□□□□ -0.66
STRADBP1-201ENST00000478954 UNC13AQ9UPW8 1703 aa10.94□□□□□ -0.66
STRADBP1-201ENST00000478954 DDX12PQ92771 950 aa10.93□□□□□ -0.66
STRADBP1-201ENST00000478954 ARXQ96QS3 562 aa10.93□□□□□ -0.66
STRADBP1-201ENST00000478954 TESPA1A2RU30 521 aaPredicted RBP10.92□□□□□ -0.66
STRADBP1-201ENST00000478954 FAM205CA6NFA0 338 aa10.92□□□□□ -0.66
STRADBP1-201ENST00000478954 CDAN1Q8IWY9 1227 aa10.92□□□□□ -0.66
STRADBP1-201ENST00000478954 CECR2Q9BXF3 1484 aa10.9□□□□□ -0.66
STRADBP1-201ENST00000478954 ZNF316A6NFI3 1004 aaPredicted RBP10.9□□□□□ -0.66
STRADBP1-201ENST00000478954 PTGER2P43116 358 aa10.9□□□□□ -0.66
STRADBP1-201ENST00000478954 PRIM1P49642 420 aaKnown RBP10.89□□□□□ -0.67
STRADBP1-201ENST00000478954 HS3ST6Q96QI5 342 aa10.89□□□□□ -0.67
STRADBP1-201ENST00000478954 GRXCR2A6NFK2 248 aa10.88□□□□□ -0.67
STRADBP1-201ENST00000478954 FOSBP53539 338 aa10.87□□□□□ -0.67
STRADBP1-201ENST00000478954 C14orf37Q86TY3 774 aa10.87□□□□□ -0.67
STRADBP1-201ENST00000478954 PCDHGA10Q9Y5H3 936 aa10.87□□□□□ -0.67
STRADBP1-201ENST00000478954 JPH4Q96JJ6 628 aa10.86□□□□□ -0.67
STRADBP1-201ENST00000478954 BRPF1P55201 1214 aaPredicted RBP10.85□□□□□ -0.67
STRADBP1-201ENST00000478954 ZNF454Q8N9F8 522 aa10.85□□□□□ -0.67
STRADBP1-201ENST00000478954 PCDH10Q9P2E7 1040 aa10.85□□□□□ -0.67
STRADBP1-201ENST00000478954 ERBB3P21860 1342 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms