RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 HS6ST3Q8IZP7 471 aa10.25□□□□□ -0.77
CMSS1-203ENST00000478909 ST18O60284 1047 aa10.24□□□□□ -0.77
CMSS1-203ENST00000478909 BAZ1AQ9NRL2 1556 aaPredicted RBP10.23□□□□□ -0.77
CMSS1-203ENST00000478909 SNPHO15079 494 aa10.23□□□□□ -0.77
CMSS1-203ENST00000478909 CHGAP10645 457 aaKnown RBP10.22□□□□□ -0.77
CMSS1-203ENST00000478909 TMEM92Q6UXU6 159 aa10.21□□□□□ -0.77
CMSS1-203ENST00000478909 UNC13AQ9UPW8 1703 aa10.19□□□□□ -0.78
CMSS1-203ENST00000478909 DNAJC5Q9H3Z4 198 aa10.15□□□□□ -0.78
CMSS1-203ENST00000478909 PPP1R37O75864 691 aa10.14□□□□□ -0.79
CMSS1-203ENST00000478909 HOXB3P14651 431 aaPredicted RBP10.14□□□□□ -0.79
CMSS1-203ENST00000478909 NKX1-1Q15270 411 aaPredicted RBP10.13□□□□□ -0.79
CMSS1-203ENST00000478909 MROH2BQ7Z745 1585 aa10.13□□□□□ -0.79
CMSS1-203ENST00000478909 SMARCA4P51532 1647 aa10.11□□□□□ -0.79
CMSS1-203ENST00000478909 CECR2Q9BXF3 1484 aa10.1□□□□□ -0.79
CMSS1-203ENST00000478909 MARVELD3Q96A59 401 aa10.1□□□□□ -0.79
CMSS1-203ENST00000478909 DOK7Q18PE1 504 aa10.08□□□□□ -0.8
CMSS1-203ENST00000478909 PCDH10Q9P2E7 1040 aa10.08□□□□□ -0.8
CMSS1-203ENST00000478909 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
CMSS1-203ENST00000478909 PEG3Q9GZU2 1588 aa10.07□□□□□ -0.8
CMSS1-203ENST00000478909 BICRAQ9NZM4 1560 aa10.07□□□□□ -0.8
CMSS1-203ENST00000478909 KIF3CO14782 793 aa10.06□□□□□ -0.8
CMSS1-203ENST00000478909 ZNF710Q8N1W2 664 aa10.06□□□□□ -0.8
CMSS1-203ENST00000478909 C2orf72A6NCS6 295 aa10.05□□□□□ -0.8
CMSS1-203ENST00000478909 WIZO95785 1651 aa10.04□□□□□ -0.8
CMSS1-203ENST00000478909 EMP3P54852 163 aa10.04□□□□□ -0.8
CMSS1-203ENST00000478909 AMER1Q5JTC6 1135 aaPredicted RBP10.04□□□□□ -0.8
CMSS1-203ENST00000478909 CDAN1Q8IWY9 1227 aa10.04□□□□□ -0.8
CMSS1-203ENST00000478909 RTN4Q9NQC3 1192 aaKnown RBP10.03□□□□□ -0.8
CMSS1-203ENST00000478909 RIMBP2O15034 1052 aa10.02□□□□□ -0.81
CMSS1-203ENST00000478909 HOXB1P14653 301 aaPredicted RBP10.02□□□□□ -0.81
CMSS1-203ENST00000478909 RYDENQ9NUL5 291 aaKnown RBP10.02□□□□□ -0.81
CMSS1-203ENST00000478909 GTPBP6O43824 516 aaPredicted RBP10□□□□□ -0.81
CMSS1-203ENST00000478909 TMC2Q8TDI7 906 aa10□□□□□ -0.81
CMSS1-203ENST00000478909 ZSWIM6Q9HCJ5 1215 aa9.99□□□□□ -0.81
CMSS1-203ENST00000478909 POTEB3A0JP26 581 aa9.98□□□□□ -0.81
CMSS1-203ENST00000478909 FAM205CA6NFA0 338 aa9.98□□□□□ -0.81
CMSS1-203ENST00000478909 GPR153Q6NV75 609 aa9.98□□□□□ -0.81
CMSS1-203ENST00000478909 POTEBQ6S5H4 581 aa9.98□□□□□ -0.81
CMSS1-203ENST00000478909 PLSCR2Q9NRY7 297 aa9.98□□□□□ -0.81
CMSS1-203ENST00000478909 EIF4G1Q04637 1599 aaKnown RBP9.97□□□□□ -0.81
CMSS1-203ENST00000478909 HS3ST6Q96QI5 342 aa9.97□□□□□ -0.81
CMSS1-203ENST00000478909 SMARCA2P51531 1590 aa9.96□□□□□ -0.82
CMSS1-203ENST00000478909 ARSIQ5FYB1 569 aa9.94□□□□□ -0.82
CMSS1-203ENST00000478909 GPHNQ9NQX3 736 aaPredicted RBP9.93□□□□□ -0.82
CMSS1-203ENST00000478909 FOXK1P85037 733 aa9.92□□□□□ -0.82
CMSS1-203ENST00000478909 KHSRPQ92945 711 aaKnown RBP eCLIP9.92□□□□□ -0.82
CMSS1-203ENST00000478909 ERBB3P21860 1342 aa9.91□□□□□ -0.82
CMSS1-203ENST00000478909 SLC34A2O95436 690 aa9.91□□□□□ -0.82
CMSS1-203ENST00000478909 DSG2Q14126 1118 aa9.9□□□□□ -0.82
CMSS1-203ENST00000478909 PLPP6Q8IY26 295 aa9.89□□□□□ -0.83
CMSS1-203ENST00000478909 VARS2Q5ST30 1063 aaKnown RBP9.88□□□□□ -0.83
CMSS1-203ENST00000478909 CRISPLD2Q9H0B8 497 aa9.88□□□□□ -0.83
CMSS1-203ENST00000478909 CCDC88BA6NC98 1476 aa9.87□□□□□ -0.83
CMSS1-203ENST00000478909 BBXQ8WY36 941 aaPredicted RBP9.87□□□□□ -0.83
CMSS1-203ENST00000478909 PCDHGA4Q9Y5G9 962 aa9.87□□□□□ -0.83
CMSS1-203ENST00000478909 NCKAP5LQ9HCH0 1330 aa9.86□□□□□ -0.83
CMSS1-203ENST00000478909 KRTAP3-3Q9BYR6 98 aa9.86□□□□□ -0.83
CMSS1-203ENST00000478909 KRTAP3-2Q9BYR7 98 aa9.86□□□□□ -0.83
CMSS1-203ENST00000478909 HMGXB3Q12766 1538 aa9.86□□□□□ -0.83
CMSS1-203ENST00000478909 ATAD2BQ9ULI0 1458 aa9.85□□□□□ -0.83
CMSS1-203ENST00000478909 NUDT7P0C024 238 aa9.85□□□□□ -0.83
CMSS1-203ENST00000478909 BAZ1BQ9UIG0 1483 aaKnown RBP9.84□□□□□ -0.83
CMSS1-203ENST00000478909 ZNF316A6NFI3 1004 aaPredicted RBP9.83□□□□□ -0.84
CMSS1-203ENST00000478909 PTCD2Q8WV60 388 aaKnown RBP9.83□□□□□ -0.84
CMSS1-203ENST00000478909 EEA1Q15075 1411 aa9.82□□□□□ -0.84
CMSS1-203ENST00000478909 PDE4AP27815 886 aa9.82□□□□□ -0.84
CMSS1-203ENST00000478909 PPP1R15BQ5SWA1 713 aa9.81□□□□□ -0.84
CMSS1-203ENST00000478909 ZNF687Q8N1G0 1237 aa9.8□□□□□ -0.84
CMSS1-203ENST00000478909 NCAPD3P42695 1498 aa9.79□□□□□ -0.84
CMSS1-203ENST00000478909 CADPS2Q86UW7 1296 aa9.79□□□□□ -0.84
CMSS1-203ENST00000478909 SPNS2Q8IVW8 549 aa9.79□□□□□ -0.84
CMSS1-203ENST00000478909 LARP6Q9BRS8 491 aaKnown RBP9.79□□□□□ -0.84
CMSS1-203ENST00000478909 LHX6Q9UPM6 363 aa9.79□□□□□ -0.84
CMSS1-203ENST00000478909 KDM4FA0A1W2PPD8 638 aa9.78□□□□□ -0.84
CMSS1-203ENST00000478909 SPRYD3Q8NCJ5 442 aa9.76□□□□□ -0.85
CMSS1-203ENST00000478909 DDX27Q96GQ7 796 aaKnown RBP9.76□□□□□ -0.85
CMSS1-203ENST00000478909 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.76□□□□□ -0.85
CMSS1-203ENST00000478909 TBC1D12O60347 775 aa9.75□□□□□ -0.85
CMSS1-203ENST00000478909 MFSD10Q14728 455 aa9.75□□□□□ -0.85
CMSS1-203ENST00000478909 OXER1Q8TDS5 423 aa9.75□□□□□ -0.85
CMSS1-203ENST00000478909 UPF1Q92900 1129 aaKnown RBP eCLIP9.75□□□□□ -0.85
CMSS1-203ENST00000478909 MMRN1Q13201 1228 aa9.72□□□□□ -0.85
CMSS1-203ENST00000478909 PAXIP1Q6ZW49 1069 aaPredicted RBP9.71□□□□□ -0.86
CMSS1-203ENST00000478909 WRNQ14191 1432 aaPredicted RBP eCLIP9.7□□□□□ -0.86
CMSS1-203ENST00000478909 POTEEQ6S8J3 1075 aa9.69□□□□□ -0.86
CMSS1-203ENST00000478909 CFAP44Q96MT7 982 aa9.69□□□□□ -0.86
CMSS1-203ENST00000478909 PSDA5PKW4 1024 aaPredicted RBP9.68□□□□□ -0.86
CMSS1-203ENST00000478909 ABCC8Q09428 1581 aa9.67□□□□□ -0.86
CMSS1-203ENST00000478909 EMILIN3Q9NT22 766 aa9.67□□□□□ -0.86
CMSS1-203ENST00000478909 PRDM2Q13029 1718 aa9.67□□□□□ -0.86
CMSS1-203ENST00000478909 PBX2P40425 430 aa9.66□□□□□ -0.86
CMSS1-203ENST00000478909 AXIN2Q9Y2T1 843 aa9.66□□□□□ -0.86
CMSS1-203ENST00000478909 LOC105371045A0A1W2PR82 267 aa9.65□□□□□ -0.86
CMSS1-203ENST00000478909 LSM11P83369 360 aaKnown RBP eCLIP9.65□□□□□ -0.86
CMSS1-203ENST00000478909 TOP2BQ02880 1626 aa9.64□□□□□ -0.87
CMSS1-203ENST00000478909 BIVM-ERCC5R4GMW8 1640 aa9.64□□□□□ -0.87
CMSS1-203ENST00000478909 EVI5O60447 810 aa9.63□□□□□ -0.87
CMSS1-203ENST00000478909 MAP3K9P80192 1104 aa9.63□□□□□ -0.87
CMSS1-203ENST00000478909 PPP4R3BQ5MIZ7 849 aa9.63□□□□□ -0.87
CMSS1-203ENST00000478909 ANKRD13DQ6ZTN6 518 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms