RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.79□□□□□ -1.32
FNDC3B-209ENST00000478016 PDE4AP27815 886 aa6.78□□□□□ -1.32
FNDC3B-209ENST00000478016 TMC2Q8TDI7 906 aa6.78□□□□□ -1.32
FNDC3B-209ENST00000478016 CRISPLD2Q9H0B8 497 aa6.78□□□□□ -1.32
FNDC3B-209ENST00000478016 NCKAP5LQ9HCH0 1330 aa6.77□□□□□ -1.32
FNDC3B-209ENST00000478016 GPHNQ9NQX3 736 aaPredicted RBP6.77□□□□□ -1.33
FNDC3B-209ENST00000478016 LHX8Q68G74 356 aa6.76□□□□□ -1.33
FNDC3B-209ENST00000478016 LARP6Q9BRS8 491 aaKnown RBP6.76□□□□□ -1.33
FNDC3B-209ENST00000478016 KDM2AQ9Y2K7 1162 aa6.76□□□□□ -1.33
FNDC3B-209ENST00000478016 TMEM92Q6UXU6 159 aa6.75□□□□□ -1.33
FNDC3B-209ENST00000478016 WDR70Q9NW82 654 aa6.75□□□□□ -1.33
FNDC3B-209ENST00000478016 C2orf72A6NCS6 295 aa6.74□□□□□ -1.33
FNDC3B-209ENST00000478016 KIF3CO14782 793 aa6.74□□□□□ -1.33
FNDC3B-209ENST00000478016 MFSD10Q14728 455 aa6.74□□□□□ -1.33
FNDC3B-209ENST00000478016 DDX27Q96GQ7 796 aaKnown RBP6.74□□□□□ -1.33
FNDC3B-209ENST00000478016 FOXK1P85037 733 aa6.72□□□□□ -1.33
FNDC3B-209ENST00000478016 PPP1R15BQ5SWA1 713 aa6.72□□□□□ -1.33
FNDC3B-209ENST00000478016 SLAIN1Q8ND83 568 aa6.72□□□□□ -1.33
FNDC3B-209ENST00000478016 DSG2Q14126 1118 aa6.71□□□□□ -1.34
FNDC3B-209ENST00000478016 OTUD5Q96G74 571 aa6.71□□□□□ -1.34
FNDC3B-209ENST00000478016 PLPP6Q8IY26 295 aa6.69□□□□□ -1.34
FNDC3B-209ENST00000478016 E2F4Q16254 413 aa6.68□□□□□ -1.34
FNDC3B-209ENST00000478016 P3H3Q8IVL6 736 aa6.68□□□□□ -1.34
FNDC3B-209ENST00000478016 CAMK2BQ13554 666 aa6.66□□□□□ -1.34
FNDC3B-209ENST00000478016 SNPHO15079 494 aa6.64□□□□□ -1.35
FNDC3B-209ENST00000478016 KCNV2Q8TDN2 545 aa6.64□□□□□ -1.35
FNDC3B-209ENST00000478016 SLC34A2O95436 690 aa6.63□□□□□ -1.35
FNDC3B-209ENST00000478016 DOK7Q18PE1 504 aa6.63□□□□□ -1.35
FNDC3B-209ENST00000478016 RIMBP2O15034 1052 aa6.62□□□□□ -1.35
FNDC3B-209ENST00000478016 ARHGEF1Q92888 912 aaKnown RBP6.62□□□□□ -1.35
FNDC3B-209ENST00000478016 EMILIN3Q9NT22 766 aa6.62□□□□□ -1.35
FNDC3B-209ENST00000478016 DAXXQ9UER7 740 aaPredicted RBP6.62□□□□□ -1.35
FNDC3B-209ENST00000478016 HOXB3P14651 431 aaPredicted RBP6.61□□□□□ -1.35
FNDC3B-209ENST00000478016 OXER1Q8TDS5 423 aa6.61□□□□□ -1.35
FNDC3B-209ENST00000478016 PTCD2Q8WV60 388 aaKnown RBP6.61□□□□□ -1.35
FNDC3B-209ENST00000478016 ARIH1Q9Y4X5 557 aaPredicted RBP6.61□□□□□ -1.35
FNDC3B-209ENST00000478016 TBC1D12O60347 775 aa6.6□□□□□ -1.35
FNDC3B-209ENST00000478016 ZNF710Q8N1W2 664 aa6.6□□□□□ -1.35
FNDC3B-209ENST00000478016 UPF1Q92900 1129 aaKnown RBP eCLIP6.6□□□□□ -1.35
FNDC3B-209ENST00000478016 DPYSL4O14531 572 aa6.59□□□□□ -1.35
FNDC3B-209ENST00000478016 ZSWIM6Q9HCJ5 1215 aa6.59□□□□□ -1.35
FNDC3B-209ENST00000478016 MAP3K9P80192 1104 aa6.58□□□□□ -1.36
FNDC3B-209ENST00000478016 PCDHGA4Q9Y5G9 962 aa6.58□□□□□ -1.36
FNDC3B-209ENST00000478016 ZNF316A6NFI3 1004 aaPredicted RBP6.56□□□□□ -1.36
FNDC3B-209ENST00000478016 SPDYE16A6NNV3 312 aaPredicted RBP6.56□□□□□ -1.36
FNDC3B-209ENST00000478016 NBR1Q14596 966 aa6.56□□□□□ -1.36
FNDC3B-209ENST00000478016 PDIA6Q15084 440 aa6.56□□□□□ -1.36
FNDC3B-209ENST00000478016 ARSIQ5FYB1 569 aa6.54□□□□□ -1.36
FNDC3B-209ENST00000478016 GPR153Q6NV75 609 aa6.54□□□□□ -1.36
FNDC3B-209ENST00000478016 BCANQ96GW7 911 aa6.54□□□□□ -1.36
FNDC3B-209ENST00000478016 EVI5O60447 810 aa6.53□□□□□ -1.36
FNDC3B-209ENST00000478016 HOXB1P14653 301 aaPredicted RBP6.53□□□□□ -1.36
FNDC3B-209ENST00000478016 TTBK1Q5TCY1 1321 aaPredicted RBP6.52□□□□□ -1.37
FNDC3B-209ENST00000478016 NUDT7P0C024 238 aa6.52□□□□□ -1.37
FNDC3B-209ENST00000478016 KDM4FA0A1W2PPD8 638 aa6.51□□□□□ -1.37
FNDC3B-209ENST00000478016 ST18O60284 1047 aa6.51□□□□□ -1.37
FNDC3B-209ENST00000478016 KHSRPQ92945 711 aaKnown RBP eCLIP6.51□□□□□ -1.378e-9■■□□□ 13.3
FNDC3B-209ENST00000478016 FAM163AQ96GL9 167 aaPredicted RBP6.51□□□□□ -1.37
FNDC3B-209ENST00000478016 ANO8Q9HCE9 1232 aaPredicted RBP6.51□□□□□ -1.37
FNDC3B-209ENST00000478016 SEMA3EO15041 775 aa6.5□□□□□ -1.37
FNDC3B-209ENST00000478016 TESPA1A2RU30 521 aaPredicted RBP6.48□□□□□ -1.37
FNDC3B-209ENST00000478016 TULP1O00294 542 aaPredicted RBP6.48□□□□□ -1.37
FNDC3B-209ENST00000478016 PTGER2P43116 358 aa6.48□□□□□ -1.37
FNDC3B-209ENST00000478016 PSDA5PKW4 1024 aaPredicted RBP6.47□□□□□ -1.37
FNDC3B-209ENST00000478016 SMYD5Q6GMV2 418 aa6.47□□□□□ -1.37
FNDC3B-209ENST00000478016 DDX12PQ92771 950 aa6.47□□□□□ -1.37
FNDC3B-209ENST00000478016 GRXCR2A6NFK2 248 aa6.46□□□□□ -1.38
FNDC3B-209ENST00000478016 PHF14O94880 888 aa6.46□□□□□ -1.38
FNDC3B-209ENST00000478016 MLLT3P42568 568 aaPredicted RBP6.46□□□□□ -1.38
FNDC3B-209ENST00000478016 EMP3P54852 163 aa6.46□□□□□ -1.38
FNDC3B-209ENST00000478016 MYT1Q01538 1121 aa6.46□□□□□ -1.38
FNDC3B-209ENST00000478016 JPH4Q96JJ6 628 aa6.46□□□□□ -1.38
FNDC3B-209ENST00000478016 LHX6Q9UPM6 363 aa6.46□□□□□ -1.38
FNDC3B-209ENST00000478016 FOSBP53539 338 aa6.45□□□□□ -1.38
FNDC3B-209ENST00000478016 LCE2DQ5TA82 110 aaPredicted RBP6.45□□□□□ -1.38
FNDC3B-209ENST00000478016 MARVELD3Q96A59 401 aa6.45□□□□□ -1.38
FNDC3B-209ENST00000478016 ZNF454Q8N9F8 522 aa6.44□□□□□ -1.38
FNDC3B-209ENST00000478016 EPAS1Q99814 870 aa6.44□□□□□ -1.38
FNDC3B-209ENST00000478016 ERBB3P21860 1342 aa6.44□□□□□ -1.38
FNDC3B-209ENST00000478016 PPP4R3BQ5MIZ7 849 aa6.43□□□□□ -1.38
FNDC3B-209ENST00000478016 TYW1BQ6NUM6 668 aa6.43□□□□□ -1.38
FNDC3B-209ENST00000478016 FBXW7Q969H0 707 aa6.43□□□□□ -1.38
FNDC3B-209ENST00000478016 PCDHGA10Q9Y5H3 936 aa6.43□□□□□ -1.38
FNDC3B-209ENST00000478016 OSBPP22059 807 aa6.42□□□□□ -1.38
FNDC3B-209ENST00000478016 FAM205CA6NFA0 338 aa6.41□□□□□ -1.38
FNDC3B-209ENST00000478016 VARS2Q5ST30 1063 aaKnown RBP6.41□□□□□ -1.38
FNDC3B-209ENST00000478016 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.41□□□□□ -1.38
FNDC3B-209ENST00000478016 ZDHHC16Q969W1 377 aa6.41□□□□□ -1.38
FNDC3B-209ENST00000478016 MAP3K7O43318 606 aa6.4□□□□□ -1.38
FNDC3B-209ENST00000478016 EN1Q05925 392 aaPredicted RBP6.4□□□□□ -1.38
FNDC3B-209ENST00000478016 LMOD2Q6P5Q4 547 aa6.39□□□□□ -1.39
FNDC3B-209ENST00000478016 RBM33Q96EV2 1170 aaKnown RBP6.39□□□□□ -1.39
FNDC3B-209ENST00000478016 HS3ST6Q96QI5 342 aa6.39□□□□□ -1.39
FNDC3B-209ENST00000478016 PRIM1P49642 420 aaKnown RBP6.38□□□□□ -1.39
FNDC3B-209ENST00000478016 RBM26Q5T8P6 1007 aaKnown RBP6.38□□□□□ -1.39
FNDC3B-209ENST00000478016 ADAM33Q9BZ11 813 aa6.38□□□□□ -1.39
FNDC3B-209ENST00000478016 BCL2L12Q9HB09 334 aa6.38□□□□□ -1.39
FNDC3B-209ENST00000478016 KCNH8Q96L42 1107 aa6.37□□□□□ -1.39
FNDC3B-209ENST00000478016 POTEB3A0JP26 581 aa6.36□□□□□ -1.39
FNDC3B-209ENST00000478016 NUTM2FA1L443 756 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms