RNA–Protein interactions for RNA: ENST00000477119.1

APTX-221, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-221ENST00000477119 ZMYM4Q5VZL5 1548 aa21.71■■□□□ 1.07
APTX-221ENST00000477119 PCF11O94913 1555 aaKnown RBP21.71■■□□□ 1.07
APTX-221ENST00000477119 ZFYVE16Q7Z3T8 1539 aa21.7■■□□□ 1.07
APTX-221ENST00000477119 CCDC18Q5T9S5 1454 aa21.7■■□□□ 1.06
APTX-221ENST00000477119 LRRIQ1Q96JM4 1722 aa21.69■■□□□ 1.06
APTX-221ENST00000477119 ARHGAP5Q13017 1502 aa21.69■■□□□ 1.06
APTX-221ENST00000477119 BCORL1Q5H9F3 1711 aa21.69■■□□□ 1.06
APTX-221ENST00000477119 MYO5CQ9NQX4 1742 aa21.69■■□□□ 1.06
APTX-221ENST00000477119 MLECQ14165 292 aa21.67■■□□□ 1.06
APTX-221ENST00000477119 AFAP1Q8N556 730 aa21.67■■□□□ 1.06
APTX-221ENST00000477119 FYCO1Q9BQS8 1478 aa21.65■■□□□ 1.06
APTX-221ENST00000477119 MYT1LQ9UL68 1186 aa21.65■■□□□ 1.06
APTX-221ENST00000477119 MADDQ8WXG6 1647 aa21.65■■□□□ 1.06
APTX-221ENST00000477119 PLPPR3Q6T4P5 718 aa21.63■■□□□ 1.05
APTX-221ENST00000477119 ATP10AO60312 1499 aa21.62■■□□□ 1.05
APTX-221ENST00000477119 ZNF518AQ6AHZ1 1483 aa21.61■■□□□ 1.05
APTX-221ENST00000477119 C9orf84Q5VXU9 1444 aa21.57■■□□□ 1.04
APTX-221ENST00000477119 ZNF777Q9ULD5 760 aaPredicted RBP21.57■■□□□ 1.04
APTX-221ENST00000477119 SIGLEC1Q9BZZ2 1709 aa21.57■■□□□ 1.04
APTX-221ENST00000477119 RIMS1Q86UR5 1692 aaKnown RBP21.56■■□□□ 1.04
APTX-221ENST00000477119 CDC42BPBQ9Y5S2 1711 aa21.55■■□□□ 1.04
APTX-221ENST00000477119 TRAPPC8Q9Y2L5 1435 aa21.55■■□□□ 1.04
APTX-221ENST00000477119 ILDR1Q86SU0 546 aaPredicted RBP21.54■■□□□ 1.04
APTX-221ENST00000477119 PREX2Q70Z35 1606 aa21.54■■□□□ 1.04
APTX-221ENST00000477119 ARHGEF12Q9NZN5 1544 aa21.54■■□□□ 1.04
APTX-221ENST00000477119 KDM5CP41229 1560 aa21.53■■□□□ 1.04
APTX-221ENST00000477119 CEP162Q5TB80 1403 aa21.51■■□□□ 1.03
APTX-221ENST00000477119 MLH3Q9UHC1 1453 aa21.51■■□□□ 1.03
APTX-221ENST00000477119 ABCC1P33527 1531 aa21.5■■□□□ 1.03
APTX-221ENST00000477119 GPATCH8Q9UKJ3 1502 aaKnown RBP21.5■■□□□ 1.03
APTX-221ENST00000477119 MTUS2Q5JR59 1369 aa21.5■■□□□ 1.03
APTX-221ENST00000477119 CFDP1Q9UEE9 299 aaPredicted RBP21.49■■□□□ 1.03
APTX-221ENST00000477119 LMTK3Q96Q04 1460 aa21.49■■□□□ 1.03
APTX-221ENST00000477119 HNRNPMP52272 730 aaKnown RBP eCLIP21.48■■□□□ 1.03
APTX-221ENST00000477119 CCNB3Q8WWL7 1395 aa21.48■■□□□ 1.03
APTX-221ENST00000477119 HSPA2P54652 639 aa21.47■■□□□ 1.03
APTX-221ENST00000477119 CDC42BPAQ5VT25 1732 aa21.46■■□□□ 1.03
APTX-221ENST00000477119 DIP2CQ9Y2E4 1556 aa21.46■■□□□ 1.03
APTX-221ENST00000477119 LOC105371045A0A1W2PR82 267 aa21.46■■□□□ 1.03
APTX-221ENST00000477119 CEBPAP49715 358 aaPredicted RBP21.46■■□□□ 1.03
APTX-221ENST00000477119 SPAG9O60271 1321 aaKnown RBP21.43■■□□□ 1.02
APTX-221ENST00000477119 ITSN2Q9NZM3 1697 aa21.43■■□□□ 1.02
APTX-221ENST00000477119 FER1L4A9Z1Z3 1794 aa21.43■■□□□ 1.02
APTX-221ENST00000477119 SAMD9LQ8IVG5 1584 aa21.42■■□□□ 1.02
APTX-221ENST00000477119 ABCA6Q8N139 1617 aa21.42■■□□□ 1.02
APTX-221ENST00000477119 REREQ9P2R6 1566 aa21.4■■□□□ 1.02
APTX-221ENST00000477119 ESF1Q9H501 851 aaKnown RBP21.4■■□□□ 1.02
APTX-221ENST00000477119 SYCP2Q9BX26 1530 aa21.39■■□□□ 1.02
APTX-221ENST00000477119 KIAA1107Q9UPP5 1409 aa21.39■■□□□ 1.02
APTX-221ENST00000477119 ZNF644Q9H582 1327 aaPredicted RBP21.38■■□□□ 1.01
APTX-221ENST00000477119 PLEKHH2Q8IVE3 1493 aa21.38■■□□□ 1.01
APTX-221ENST00000477119 AGLP35573 1532 aa21.37■■□□□ 1.01
APTX-221ENST00000477119 KIDINS220Q9ULH0 1771 aa21.36■■□□□ 1.01
APTX-221ENST00000477119 EHBP1L1Q8N3D4 1523 aa21.34■■□□□ 1.01
APTX-221ENST00000477119 TIAM1Q13009 1591 aa21.31■■□□□ 1
APTX-221ENST00000477119 ATP7AQ04656 1500 aa21.29■■□□□ 1
APTX-221ENST00000477119 NCOA2Q15596 1464 aa21.27■■□□□ 1
APTX-221ENST00000477119 UHRF1BP1Q6BDS2 1440 aa21.27■■□□□ 1
APTX-221ENST00000477119 VPS8Q8N3P4 1428 aa21.27■■□□□ 1
APTX-221ENST00000477119 CNTLNQ9NXG0 1405 aa21.27■■□□□ 1
APTX-221ENST00000477119 A2MP01023 1474 aa21.26■□□□□ 0.99
APTX-221ENST00000477119 MBD5Q9P267 1494 aa21.26■□□□□ 0.99
APTX-221ENST00000477119 FBXO41Q8TF61 875 aa21.26■□□□□ 0.99
APTX-221ENST00000477119 GGT6Q6P531 493 aa21.25■□□□□ 0.99
APTX-221ENST00000477119 INO80Q9ULG1 1556 aaPredicted RBP21.24■□□□□ 0.99
APTX-221ENST00000477119 PREX1Q8TCU6 1659 aa21.24■□□□□ 0.99
APTX-221ENST00000477119 ZMYM3Q14202 1370 aa21.23■□□□□ 0.99
APTX-221ENST00000477119 C3P01024 1663 aa21.21■□□□□ 0.99
APTX-221ENST00000477119 SUPT6HQ7KZ85 1726 aaKnown RBP21.21■□□□□ 0.99
APTX-221ENST00000477119 RSPH4AQ5TD94 716 aa21.2■□□□□ 0.98
APTX-221ENST00000477119 RTEL1-TNFRSF6BF6WH68 1400 aa21.2■□□□□ 0.98
APTX-221ENST00000477119 LRRC9Q6ZRR7 1453 aa21.2■□□□□ 0.98
APTX-221ENST00000477119 KANK4Q5T7N3 995 aaPredicted RBP21.19■□□□□ 0.98
APTX-221ENST00000477119 DMRT2Q9Y5R5 561 aa21.19■□□□□ 0.98
APTX-221ENST00000477119 PLXNC1O60486 1568 aa21.19■□□□□ 0.98
APTX-221ENST00000477119 CAMSAP2Q08AD1 1489 aa21.18■□□□□ 0.98
APTX-221ENST00000477119 CCDC141Q6ZP82 1450 aa21.16■□□□□ 0.98
APTX-221ENST00000477119 DHX29Q7Z478 1369 aaKnown RBP21.16■□□□□ 0.98
APTX-221ENST00000477119 PPP6R1Q9UPN7 881 aa21.16■□□□□ 0.98
APTX-221ENST00000477119 TSPY4P0CV99 314 aa21.15■□□□□ 0.98
APTX-221ENST00000477119 TSPY10P0CW01 314 aa21.15■□□□□ 0.98
APTX-221ENST00000477119 CERKQ8TCT0 537 aa21.15■□□□□ 0.98
APTX-221ENST00000477119 NPATQ14207 1427 aa21.14■□□□□ 0.98
APTX-221ENST00000477119 KIF3BO15066 747 aa21.14■□□□□ 0.97
APTX-221ENST00000477119 SETD1BQ9UPS6 1966 aaKnown RBP21.13■□□□□ 0.97
APTX-221ENST00000477119 ADGBQ8N7X0 1667 aa21.12■□□□□ 0.97
APTX-221ENST00000477119 MAP3K1Q13233 1512 aa21.11■□□□□ 0.97
APTX-221ENST00000477119 MROH2AA6NES4 1674 aa21.11■□□□□ 0.97
APTX-221ENST00000477119 CLTCQ00610 1675 aaKnown RBP21.1■□□□□ 0.97
APTX-221ENST00000477119 APLP2Q06481 763 aa21.1■□□□□ 0.97
APTX-221ENST00000477119 STRCQ7RTU9 1775 aa21.08■□□□□ 0.97
APTX-221ENST00000477119 PTPRKQ15262 1439 aa21.08■□□□□ 0.97
APTX-221ENST00000477119 ARHGEF5Q12774 1597 aa21.06■□□□□ 0.96
APTX-221ENST00000477119 PTPRTO14522 1441 aa21.05■□□□□ 0.96
APTX-221ENST00000477119 WASHC2CQ9Y4E1 1318 aa21.04■□□□□ 0.96
APTX-221ENST00000477119 NCOA1Q15788 1441 aa21.04■□□□□ 0.96
APTX-221ENST00000477119 MYOM3Q5VTT5 1437 aa21.04■□□□□ 0.96
APTX-221ENST00000477119 MIA2Q96PC5 1412 aa21.04■□□□□ 0.96
APTX-221ENST00000477119 NCKAP5LQ9HCH0 1330 aa21.03■□□□□ 0.96
APTX-221ENST00000477119 FBXO31Q5XUX0 539 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms