RNA–Protein interactions for RNA: ENST00000476988.2

ITGB5-206, Transcript of integrin subunit beta 5, humanhuman

TSL 4

Gene ITGB5, Length 492 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-206ENST00000476988 MYT1LQ9UL68 1186 aa16.84■□□□□ 0.29
ITGB5-206ENST00000476988 MAGI2Q86UL8 1455 aa16.84■□□□□ 0.29
ITGB5-206ENST00000476988 HOXD11P31277 338 aaPredicted RBP16.83■□□□□ 0.28
ITGB5-206ENST00000476988 ADAMTSL3P82987 1691 aa16.83■□□□□ 0.28
ITGB5-206ENST00000476988 FMN1Q68DA7 1419 aa16.83■□□□□ 0.28
ITGB5-206ENST00000476988 BCORL1Q5H9F3 1711 aa16.81■□□□□ 0.28
ITGB5-206ENST00000476988 MLECQ14165 292 aa16.79■□□□□ 0.28
ITGB5-206ENST00000476988 PCF11O94913 1555 aaKnown RBP16.78■□□□□ 0.28
ITGB5-206ENST00000476988 NPM3O75607 178 aaKnown RBP16.78■□□□□ 0.28
ITGB5-206ENST00000476988 ZFYVE16Q7Z3T8 1539 aa16.78■□□□□ 0.28
ITGB5-206ENST00000476988 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.78■□□□□ 0.28
ITGB5-206ENST00000476988 ARHGEF40Q8TER5 1519 aa16.78■□□□□ 0.28
ITGB5-206ENST00000476988 PLCH2O75038 1416 aa16.78■□□□□ 0.28
ITGB5-206ENST00000476988 SCAPERQ9BY12 1400 aa16.78■□□□□ 0.28
ITGB5-206ENST00000476988 ESF1Q9H501 851 aaKnown RBP16.77■□□□□ 0.28
ITGB5-206ENST00000476988 CLIP1P30622 1438 aa16.77■□□□□ 0.27
ITGB5-206ENST00000476988 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
ITGB5-206ENST00000476988 MADDQ8WXG6 1647 aa16.76■□□□□ 0.27
ITGB5-206ENST00000476988 FRMPD1Q5SYB0 1578 aa16.75■□□□□ 0.27
ITGB5-206ENST00000476988 ZMYM4Q5VZL5 1548 aa16.73■□□□□ 0.27
ITGB5-206ENST00000476988 HECW1Q76N89 1606 aa16.72■□□□□ 0.27
ITGB5-206ENST00000476988 RICTORQ6R327 1708 aa16.72■□□□□ 0.27
ITGB5-206ENST00000476988 ATP10AO60312 1499 aa16.71■□□□□ 0.27
ITGB5-206ENST00000476988 LMTK3Q96Q04 1460 aa16.71■□□□□ 0.27
ITGB5-206ENST00000476988 RIMS1Q86UR5 1692 aaKnown RBP16.71■□□□□ 0.27
ITGB5-206ENST00000476988 CDK13Q14004 1512 aaKnown RBP16.7■□□□□ 0.26
ITGB5-206ENST00000476988 C9orf84Q5VXU9 1444 aa16.7■□□□□ 0.26
ITGB5-206ENST00000476988 TTC37Q6PGP7 1564 aa16.69■□□□□ 0.26
ITGB5-206ENST00000476988 HSPA2P54652 639 aa16.69■□□□□ 0.26
ITGB5-206ENST00000476988 YEATS2Q9ULM3 1422 aa16.69■□□□□ 0.26
ITGB5-206ENST00000476988 ZNF518AQ6AHZ1 1483 aa16.68■□□□□ 0.26
ITGB5-206ENST00000476988 KIF14Q15058 1648 aa16.66■□□□□ 0.26
ITGB5-206ENST00000476988 ARHGAP5Q13017 1502 aa16.65■□□□□ 0.26
ITGB5-206ENST00000476988 TROQ12816 1431 aaPredicted RBP16.65■□□□□ 0.26
ITGB5-206ENST00000476988 CERKQ8TCT0 537 aa16.65■□□□□ 0.26
ITGB5-206ENST00000476988 MYO5CQ9NQX4 1742 aa16.63■□□□□ 0.25
ITGB5-206ENST00000476988 AFAP1Q8N556 730 aa16.63■□□□□ 0.25
ITGB5-206ENST00000476988 ARHGAP35Q9NRY4 1499 aa16.61■□□□□ 0.25
ITGB5-206ENST00000476988 DCAF8L1A6NGE4 600 aa16.6■□□□□ 0.25
ITGB5-206ENST00000476988 UHRF1BP1Q6BDS2 1440 aa16.6■□□□□ 0.25
ITGB5-206ENST00000476988 CCDC18Q5T9S5 1454 aa16.6■□□□□ 0.25
ITGB5-206ENST00000476988 FER1L4A9Z1Z3 1794 aa16.59■□□□□ 0.25
ITGB5-206ENST00000476988 ARHGEF12Q9NZN5 1544 aa16.58■□□□□ 0.24
ITGB5-206ENST00000476988 CEBPAP49715 358 aaPredicted RBP16.57■□□□□ 0.24
ITGB5-206ENST00000476988 MLH3Q9UHC1 1453 aa16.54■□□□□ 0.24
ITGB5-206ENST00000476988 ZNF777Q9ULD5 760 aaPredicted RBP16.54■□□□□ 0.24
ITGB5-206ENST00000476988 CASKIN1Q8WXD9 1431 aa16.53■□□□□ 0.24
ITGB5-206ENST00000476988 CNTLNQ9NXG0 1405 aa16.53■□□□□ 0.24
ITGB5-206ENST00000476988 PREX1Q8TCU6 1659 aa16.53■□□□□ 0.24
ITGB5-206ENST00000476988 KDM5CP41229 1560 aa16.51■□□□□ 0.23
ITGB5-206ENST00000476988 TRAPPC8Q9Y2L5 1435 aa16.5■□□□□ 0.23
ITGB5-206ENST00000476988 SPAG9O60271 1321 aaKnown RBP16.49■□□□□ 0.23
ITGB5-206ENST00000476988 REREQ9P2R6 1566 aa16.49■□□□□ 0.23
ITGB5-206ENST00000476988 CFDP1Q9UEE9 299 aaPredicted RBP16.48■□□□□ 0.23
ITGB5-206ENST00000476988 AGLP35573 1532 aa16.47■□□□□ 0.23
ITGB5-206ENST00000476988 SETD1BQ9UPS6 1966 aaKnown RBP16.46■□□□□ 0.23
ITGB5-206ENST00000476988 PLEKHH2Q8IVE3 1493 aa16.46■□□□□ 0.23
ITGB5-206ENST00000476988 FYCO1Q9BQS8 1478 aa16.46■□□□□ 0.23
ITGB5-206ENST00000476988 DIP2CQ9Y2E4 1556 aa16.46■□□□□ 0.23
ITGB5-206ENST00000476988 PTPRTO14522 1441 aa16.45■□□□□ 0.22
ITGB5-206ENST00000476988 CCNB3Q8WWL7 1395 aa16.45■□□□□ 0.22
ITGB5-206ENST00000476988 SIGLEC1Q9BZZ2 1709 aa16.45■□□□□ 0.22
ITGB5-206ENST00000476988 PREX2Q70Z35 1606 aa16.44■□□□□ 0.22
ITGB5-206ENST00000476988 ABCC1P33527 1531 aa16.44■□□□□ 0.22
ITGB5-206ENST00000476988 MTUS2Q5JR59 1369 aa16.42■□□□□ 0.22
ITGB5-206ENST00000476988 HNRNPMP52272 730 aaKnown RBP eCLIP16.42■□□□□ 0.22
ITGB5-206ENST00000476988 CDC42BPBQ9Y5S2 1711 aa16.42■□□□□ 0.22
ITGB5-206ENST00000476988 NPATQ14207 1427 aa16.4■□□□□ 0.22
ITGB5-206ENST00000476988 ZMYM3Q14202 1370 aa16.39■□□□□ 0.21
ITGB5-206ENST00000476988 DISP3Q9P2K9 1392 aa16.39■□□□□ 0.21
ITGB5-206ENST00000476988 KIAA1107Q9UPP5 1409 aa16.39■□□□□ 0.21
ITGB5-206ENST00000476988 ABCA6Q8N139 1617 aa16.39■□□□□ 0.21
ITGB5-206ENST00000476988 PKD2Q13563 968 aa16.39■□□□□ 0.21
ITGB5-206ENST00000476988 GGT6Q6P531 493 aa16.39■□□□□ 0.21
ITGB5-206ENST00000476988 ITSN2Q9NZM3 1697 aa16.38■□□□□ 0.21
ITGB5-206ENST00000476988 GPATCH8Q9UKJ3 1502 aaKnown RBP16.36■□□□□ 0.21
ITGB5-206ENST00000476988 C3P01024 1663 aa16.36■□□□□ 0.21
ITGB5-206ENST00000476988 RSPH4AQ5TD94 716 aa16.35■□□□□ 0.21
ITGB5-206ENST00000476988 IQSEC2Q5JU85 1478 aa16.35■□□□□ 0.21
ITGB5-206ENST00000476988 SAMD9LQ8IVG5 1584 aa16.34■□□□□ 0.21
ITGB5-206ENST00000476988 NCOA1Q15788 1441 aa16.34■□□□□ 0.21
ITGB5-206ENST00000476988 A2MP01023 1474 aa16.34■□□□□ 0.21
ITGB5-206ENST00000476988 SYCP2Q9BX26 1530 aa16.34■□□□□ 0.21
ITGB5-206ENST00000476988 LRRIQ1Q96JM4 1722 aa16.33■□□□□ 0.2
ITGB5-206ENST00000476988 KIDINS220Q9ULH0 1771 aa16.33■□□□□ 0.2
ITGB5-206ENST00000476988 ATP7AQ04656 1500 aa16.32■□□□□ 0.2
ITGB5-206ENST00000476988 CDC42BPAQ5VT25 1732 aa16.32■□□□□ 0.2
ITGB5-206ENST00000476988 STRCQ7RTU9 1775 aa16.32■□□□□ 0.2
ITGB5-206ENST00000476988 MROH2AA6NES4 1674 aa16.3■□□□□ 0.2
ITGB5-206ENST00000476988 NCKAP5LQ9HCH0 1330 aa16.29■□□□□ 0.2
ITGB5-206ENST00000476988 TSPY4P0CV99 314 aa16.29■□□□□ 0.2
ITGB5-206ENST00000476988 TSPY10P0CW01 314 aa16.29■□□□□ 0.2
ITGB5-206ENST00000476988 CAMSAP1Q5T5Y3 1602 aa16.29■□□□□ 0.2
ITGB5-206ENST00000476988 UBAP1LF5GYI3 381 aa16.28■□□□□ 0.2
ITGB5-206ENST00000476988 SUPT6HQ7KZ85 1726 aaKnown RBP16.27■□□□□ 0.19
ITGB5-206ENST00000476988 RTEL1-TNFRSF6BF6WH68 1400 aa16.27■□□□□ 0.19
ITGB5-206ENST00000476988 SOCS7O14512 581 aa16.26■□□□□ 0.19
ITGB5-206ENST00000476988 PLA2R1Q13018 1463 aa16.26■□□□□ 0.19
ITGB5-206ENST00000476988 WASHC2CQ9Y4E1 1318 aa16.25■□□□□ 0.19
ITGB5-206ENST00000476988 KIF3BO15066 747 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms