RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 ARHGEF40Q8TER5 1519 aa28.93■■■□□ 2.22
ABCB1-204ENST00000476862 MAGI2Q86UL8 1455 aa28.92■■■□□ 2.22
ABCB1-204ENST00000476862 ZFYVE16Q7Z3T8 1539 aa28.9■■■□□ 2.22
ABCB1-204ENST00000476862 ZMYM4Q5VZL5 1548 aa28.89■■■□□ 2.22
ABCB1-204ENST00000476862 POGZQ7Z3K3 1410 aa28.89■■■□□ 2.22
ABCB1-204ENST00000476862 BCORL1Q5H9F3 1711 aa28.86■■■□□ 2.21
ABCB1-204ENST00000476862 ADAMTSL3P82987 1691 aa28.85■■■□□ 2.21
ABCB1-204ENST00000476862 YEATS2Q9ULM3 1422 aa28.82■■■□□ 2.2
ABCB1-204ENST00000476862 ZNF518AQ6AHZ1 1483 aa28.82■■■□□ 2.2
ABCB1-204ENST00000476862 CDC42BPBQ9Y5S2 1711 aa28.82■■■□□ 2.2
ABCB1-204ENST00000476862 PTPRMP28827 1452 aa28.8■■■□□ 2.2
ABCB1-204ENST00000476862 CEP162Q5TB80 1403 aa28.8■■■□□ 2.2
ABCB1-204ENST00000476862 AFAP1Q8N556 730 aa28.79■■■□□ 2.2
ABCB1-204ENST00000476862 PREX2Q70Z35 1606 aa28.79■■■□□ 2.2
ABCB1-204ENST00000476862 HECW2Q9P2P5 1572 aa28.79■■■□□ 2.2
ABCB1-204ENST00000476862 MTUS2Q5JR59 1369 aa28.78■■■□□ 2.2
ABCB1-204ENST00000476862 MLECQ14165 292 aa28.78■■■□□ 2.2
ABCB1-204ENST00000476862 ZNF777Q9ULD5 760 aaPredicted RBP28.78■■■□□ 2.2
ABCB1-204ENST00000476862 ATP10AO60312 1499 aa28.77■■■□□ 2.2
ABCB1-204ENST00000476862 MADDQ8WXG6 1647 aa28.76■■■□□ 2.2
ABCB1-204ENST00000476862 CDC42BPAQ5VT25 1732 aa28.73■■■□□ 2.19
ABCB1-204ENST00000476862 C9orf84Q5VXU9 1444 aa28.72■■■□□ 2.19
ABCB1-204ENST00000476862 PLPPR3Q6T4P5 718 aa28.72■■■□□ 2.19
ABCB1-204ENST00000476862 RIMS1Q86UR5 1692 aaKnown RBP28.71■■■□□ 2.19
ABCB1-204ENST00000476862 CCNB3Q8WWL7 1395 aa28.7■■■□□ 2.18
ABCB1-204ENST00000476862 LOC105371045A0A1W2PR82 267 aa28.69■■■□□ 2.18
ABCB1-204ENST00000476862 CFDP1Q9UEE9 299 aaPredicted RBP28.69■■■□□ 2.18
ABCB1-204ENST00000476862 KDM5CP41229 1560 aa28.67■■■□□ 2.18
ABCB1-204ENST00000476862 ABCC1P33527 1531 aa28.67■■■□□ 2.18
ABCB1-204ENST00000476862 ITSN2Q9NZM3 1697 aa28.65■■■□□ 2.18
ABCB1-204ENST00000476862 GPATCH8Q9UKJ3 1502 aaKnown RBP28.64■■■□□ 2.18
ABCB1-204ENST00000476862 TRAPPC8Q9Y2L5 1435 aa28.63■■■□□ 2.17
ABCB1-204ENST00000476862 MLH3Q9UHC1 1453 aa28.63■■■□□ 2.17
ABCB1-204ENST00000476862 FER1L4A9Z1Z3 1794 aa28.62■■■□□ 2.17
ABCB1-204ENST00000476862 SIGLEC1Q9BZZ2 1709 aa28.61■■■□□ 2.17
ABCB1-204ENST00000476862 EHBP1L1Q8N3D4 1523 aa28.6■■■□□ 2.17
ABCB1-204ENST00000476862 ARHGEF12Q9NZN5 1544 aa28.6■■■□□ 2.17
ABCB1-204ENST00000476862 HNRNPMP52272 730 aaKnown RBP eCLIP28.6■■■□□ 2.17
ABCB1-204ENST00000476862 PLEKHH2Q8IVE3 1493 aa28.59■■■□□ 2.17
ABCB1-204ENST00000476862 ESF1Q9H501 851 aaKnown RBP28.59■■■□□ 2.17
ABCB1-204ENST00000476862 SPAG9O60271 1321 aaKnown RBP28.57■■■□□ 2.16
ABCB1-204ENST00000476862 SAMD9LQ8IVG5 1584 aa28.57■■■□□ 2.16
ABCB1-204ENST00000476862 DIP2CQ9Y2E4 1556 aa28.57■■■□□ 2.16
ABCB1-204ENST00000476862 SYCP2Q9BX26 1530 aa28.54■■■□□ 2.16
ABCB1-204ENST00000476862 ABCA6Q8N139 1617 aa28.53■■■□□ 2.16
ABCB1-204ENST00000476862 KIAA1107Q9UPP5 1409 aa28.52■■■□□ 2.16
ABCB1-204ENST00000476862 REREQ9P2R6 1566 aa28.51■■■□□ 2.15
ABCB1-204ENST00000476862 VPS8Q8N3P4 1428 aa28.5■■■□□ 2.15
ABCB1-204ENST00000476862 KIDINS220Q9ULH0 1771 aa28.5■■■□□ 2.15
ABCB1-204ENST00000476862 SUPT6HQ7KZ85 1726 aaKnown RBP28.48■■■□□ 2.15
ABCB1-204ENST00000476862 TIAM1Q13009 1591 aa28.46■■■□□ 2.15
ABCB1-204ENST00000476862 AGLP35573 1532 aa28.45■■■□□ 2.15
ABCB1-204ENST00000476862 LMTK3Q96Q04 1460 aa28.44■■■□□ 2.14
ABCB1-204ENST00000476862 CEBPAP49715 358 aaPredicted RBP28.43■■■□□ 2.14
ABCB1-204ENST00000476862 APLP2Q06481 763 aa28.42■■■□□ 2.14
ABCB1-204ENST00000476862 ZNF644Q9H582 1327 aaPredicted RBP28.42■■■□□ 2.14
ABCB1-204ENST00000476862 NCOA2Q15596 1464 aa28.41■■■□□ 2.14
ABCB1-204ENST00000476862 ATP7AQ04656 1500 aa28.41■■■□□ 2.14
ABCB1-204ENST00000476862 HSPA2P54652 639 aa28.38■■■□□ 2.13
ABCB1-204ENST00000476862 SETD1BQ9UPS6 1966 aaKnown RBP28.37■■■□□ 2.13
ABCB1-204ENST00000476862 RSPH4AQ5TD94 716 aa28.37■■■□□ 2.13
ABCB1-204ENST00000476862 CNTLNQ9NXG0 1405 aa28.35■■■□□ 2.13
ABCB1-204ENST00000476862 A2MP01023 1474 aa28.34■■■□□ 2.13
ABCB1-204ENST00000476862 LRRC9Q6ZRR7 1453 aa28.34■■■□□ 2.13
ABCB1-204ENST00000476862 INO80Q9ULG1 1556 aaPredicted RBP28.33■■■□□ 2.13
ABCB1-204ENST00000476862 PREX1Q8TCU6 1659 aa28.32■■■□□ 2.12
ABCB1-204ENST00000476862 TSPY4P0CV99 314 aa28.3■■■□□ 2.12
ABCB1-204ENST00000476862 TSPY10P0CW01 314 aa28.3■■■□□ 2.12
ABCB1-204ENST00000476862 GGT6Q6P531 493 aa28.3■■■□□ 2.12
ABCB1-204ENST00000476862 ILDR1Q86SU0 546 aaPredicted RBP28.3■■■□□ 2.12
ABCB1-204ENST00000476862 ADGBQ8N7X0 1667 aa28.29■■■□□ 2.12
ABCB1-204ENST00000476862 MAP3K1Q13233 1512 aa28.29■■■□□ 2.12
ABCB1-204ENST00000476862 CAMSAP2Q08AD1 1489 aa28.29■■■□□ 2.12
ABCB1-204ENST00000476862 MBD5Q9P267 1494 aa28.29■■■□□ 2.12
ABCB1-204ENST00000476862 UHRF1BP1Q6BDS2 1440 aa28.29■■■□□ 2.12
ABCB1-204ENST00000476862 RTEL1-TNFRSF6BF6WH68 1400 aa28.28■■■□□ 2.12
ABCB1-204ENST00000476862 C3P01024 1663 aa28.28■■■□□ 2.12
ABCB1-204ENST00000476862 CCDC141Q6ZP82 1450 aa28.27■■■□□ 2.12
ABCB1-204ENST00000476862 KANK4Q5T7N3 995 aaPredicted RBP28.25■■■□□ 2.11
ABCB1-204ENST00000476862 PPP6R1Q9UPN7 881 aa28.22■■■□□ 2.11
ABCB1-204ENST00000476862 PLXNC1O60486 1568 aa28.21■■■□□ 2.11
ABCB1-204ENST00000476862 ZMYM3Q14202 1370 aa28.2■■■□□ 2.1
ABCB1-204ENST00000476862 MROH2AA6NES4 1674 aa28.19■■■□□ 2.1
ABCB1-204ENST00000476862 DMRT2Q9Y5R5 561 aa28.19■■■□□ 2.1
ABCB1-204ENST00000476862 DHX29Q7Z478 1369 aaKnown RBP28.19■■■□□ 2.1
ABCB1-204ENST00000476862 CLTCQ00610 1675 aaKnown RBP28.16■■■□□ 2.1
ABCB1-204ENST00000476862 KIF3BO15066 747 aa28.16■■■□□ 2.1
ABCB1-204ENST00000476862 ARHGEF5Q12774 1597 aa28.16■■■□□ 2.1
ABCB1-204ENST00000476862 MYOM3Q5VTT5 1437 aa28.15■■■□□ 2.1
ABCB1-204ENST00000476862 MIA2Q96PC5 1412 aa28.14■■■□□ 2.1
ABCB1-204ENST00000476862 NPATQ14207 1427 aa28.12■■■□□ 2.09
ABCB1-204ENST00000476862 FBXO41Q8TF61 875 aa28.09■■■□□ 2.09
ABCB1-204ENST00000476862 WASHC2CQ9Y4E1 1318 aa28.05■■■□□ 2.08
ABCB1-204ENST00000476862 STRCQ7RTU9 1775 aa28.01■■■□□ 2.07
ABCB1-204ENST00000476862 MAST1Q9Y2H9 1570 aa28■■■□□ 2.07
ABCB1-204ENST00000476862 PTPRKQ15262 1439 aa28■■■□□ 2.07
ABCB1-204ENST00000476862 CERKQ8TCT0 537 aa27.97■■■□□ 2.07
ABCB1-204ENST00000476862 KDM5DQ9BY66 1539 aa27.97■■■□□ 2.07
ABCB1-204ENST00000476862 FAM135AQ9P2D6 1515 aa27.97■■■□□ 2.07
ABCB1-204ENST00000476862 PTPN23Q9H3S7 1636 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms