RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 WDR62O43379 1518 aa11.29□□□□□ -0.6
LRCH3-215ENST00000476664 NECTIN2Q92692 538 aa11.28□□□□□ -0.6
LRCH3-215ENST00000476664 MFRPQ9BY79 579 aa11.28□□□□□ -0.6
LRCH3-215ENST00000476664 MRC2Q9UBG0 1479 aa11.27□□□□□ -0.6
LRCH3-215ENST00000476664 MNX1P50219 401 aaPredicted RBP11.27□□□□□ -0.61
LRCH3-215ENST00000476664 PDAP1Q13442 181 aaKnown RBP11.27□□□□□ -0.61
LRCH3-215ENST00000476664 ARAP1Q96P48 1450 aa11.26□□□□□ -0.61
LRCH3-215ENST00000476664 ATAD2BQ9ULI0 1458 aa11.25□□□□□ -0.61
LRCH3-215ENST00000476664 ZNF316A6NFI3 1004 aaPredicted RBP11.25□□□□□ -0.61
LRCH3-215ENST00000476664 CREBZFQ9NS37 354 aa11.25□□□□□ -0.61
LRCH3-215ENST00000476664 HMGXB3Q12766 1538 aa11.25□□□□□ -0.61
LRCH3-215ENST00000476664 CCDC82Q8N4S0 544 aa11.24□□□□□ -0.61
LRCH3-215ENST00000476664 DDRGK1Q96HY6 314 aa11.24□□□□□ -0.61
LRCH3-215ENST00000476664 KCTD17Q8N5Z5 321 aa11.23□□□□□ -0.61
LRCH3-215ENST00000476664 A6NJR5 290 aa11.22□□□□□ -0.61
LRCH3-215ENST00000476664 RBM26Q5T8P6 1007 aaKnown RBP11.21□□□□□ -0.61
LRCH3-215ENST00000476664 SPDYE1Q8NFV5 336 aaPredicted RBP11.21□□□□□ -0.61
LRCH3-215ENST00000476664 ZCCHC6Q5VYS8 1495 aaKnown RBP11.2□□□□□ -0.62
LRCH3-215ENST00000476664 PDE4AP27815 886 aa11.2□□□□□ -0.62
LRCH3-215ENST00000476664 FAM117AQ9C073 453 aa11.2□□□□□ -0.62
LRCH3-215ENST00000476664 TRAIPQ9BWF2 469 aa11.19□□□□□ -0.62
LRCH3-215ENST00000476664 TRAK2O60296 914 aa11.18□□□□□ -0.62
LRCH3-215ENST00000476664 PPP1R37O75864 691 aa11.18□□□□□ -0.62
LRCH3-215ENST00000476664 NLRP6P59044 892 aa11.18□□□□□ -0.62
LRCH3-215ENST00000476664 LARP6Q9BRS8 491 aaKnown RBP11.18□□□□□ -0.62
LRCH3-215ENST00000476664 MFSD10Q14728 455 aa11.17□□□□□ -0.62
LRCH3-215ENST00000476664 PRR29P0C7W0 189 aa11.16□□□□□ -0.62
LRCH3-215ENST00000476664 NCKAP5LQ9HCH0 1330 aa11.14□□□□□ -0.63
LRCH3-215ENST00000476664 RAD21O60216 631 aa11.13□□□□□ -0.63
LRCH3-215ENST00000476664 DDX27Q96GQ7 796 aaKnown RBP11.13□□□□□ -0.63
LRCH3-215ENST00000476664 GOPCQ9HD26 462 aa11.13□□□□□ -0.63
LRCH3-215ENST00000476664 PLEKHG3A1L390 1219 aa11.12□□□□□ -0.63
LRCH3-215ENST00000476664 ONECUT3O60422 494 aaPredicted RBP11.12□□□□□ -0.63
LRCH3-215ENST00000476664 SOX12O15370 315 aa11.11□□□□□ -0.63
LRCH3-215ENST00000476664 PSEN1P49768 467 aa11.11□□□□□ -0.63
LRCH3-215ENST00000476664 CAMK2BQ13554 666 aa11.11□□□□□ -0.63
LRCH3-215ENST00000476664 FBXO22Q8NEZ5 403 aa11.11□□□□□ -0.63
LRCH3-215ENST00000476664 MLLT3P42568 568 aaPredicted RBP11.1□□□□□ -0.63
LRCH3-215ENST00000476664 LMTK3Q96Q04 1460 aa11.1□□□□□ -0.63
LRCH3-215ENST00000476664 CLUAP1Q96AJ1 413 aa11.09□□□□□ -0.63
LRCH3-215ENST00000476664 BAZ1BQ9UIG0 1483 aaKnown RBP11.08□□□□□ -0.64
LRCH3-215ENST00000476664 KDM4FA0A1W2PPD8 638 aa11.07□□□□□ -0.64
LRCH3-215ENST00000476664 SERPINA10Q9UK55 444 aa11.07□□□□□ -0.64
LRCH3-215ENST00000476664 MINK1Q8N4C8 1332 aaPredicted RBP11.07□□□□□ -0.64
LRCH3-215ENST00000476664 SOCS7O14512 581 aa11.06□□□□□ -0.64
LRCH3-215ENST00000476664 AEBP1Q8IUX7 1158 aa11.06□□□□□ -0.64
LRCH3-215ENST00000476664 CCDC97Q96F63 343 aaPredicted RBP11.06□□□□□ -0.64
LRCH3-215ENST00000476664 CRISPLD2Q9H0B8 497 aa11.06□□□□□ -0.64
LRCH3-215ENST00000476664 PCDHB8Q9UN66 801 aa11.06□□□□□ -0.64
LRCH3-215ENST00000476664 CLEC11AQ9Y240 323 aa11.06□□□□□ -0.64
LRCH3-215ENST00000476664 PCDHB13Q9Y5F0 798 aa11.06□□□□□ -0.64
LRCH3-215ENST00000476664 TMCO4Q5TGY1 634 aa11.05□□□□□ -0.64
LRCH3-215ENST00000476664 FBXO41Q8TF61 875 aa11.05□□□□□ -0.64
LRCH3-215ENST00000476664 ZNF579Q8NAF0 562 aaKnown RBP11.04□□□□□ -0.64
LRCH3-215ENST00000476664 AMHR2Q16671 573 aa11.03□□□□□ -0.64
LRCH3-215ENST00000476664 RGS22Q8NE09 1264 aa11.03□□□□□ -0.64
LRCH3-215ENST00000476664 PHF8Q9UPP1 1060 aa11.03□□□□□ -0.64
LRCH3-215ENST00000476664 EFCAB3Q8N7B9 438 aa11.02□□□□□ -0.65
LRCH3-215ENST00000476664 PCMTD1Q96MG8 357 aaPredicted RBP11.02□□□□□ -0.65
LRCH3-215ENST00000476664 CADPSQ9ULU8 1353 aa11.02□□□□□ -0.65
LRCH3-215ENST00000476664 RSF1Q96T23 1441 aaPredicted RBP11.01□□□□□ -0.65
LRCH3-215ENST00000476664 CEP164Q9UPV0 1460 aa11.01□□□□□ -0.65
LRCH3-215ENST00000476664 PROSER2Q86WR7 435 aaPredicted RBP11.01□□□□□ -0.65
LRCH3-215ENST00000476664 ERCC6L2Q5T890 1561 aa11.01□□□□□ -0.65
LRCH3-215ENST00000476664 SMARCA4P51532 1647 aa11□□□□□ -0.65
LRCH3-215ENST00000476664 MAP2K5Q13163 448 aa11□□□□□ -0.65
LRCH3-215ENST00000476664 SPDYE16A6NNV3 312 aaPredicted RBP10.99□□□□□ -0.65
LRCH3-215ENST00000476664 PARP9Q8IXQ6 854 aa10.99□□□□□ -0.65
LRCH3-215ENST00000476664 CHD1O14646 1710 aa10.98□□□□□ -0.65
LRCH3-215ENST00000476664 MCM6Q14566 821 aa10.98□□□□□ -0.65
LRCH3-215ENST00000476664 ILDR2Q71H61 639 aa10.98□□□□□ -0.65
LRCH3-215ENST00000476664 CCDC102AQ96A19 550 aa10.98□□□□□ -0.65
LRCH3-215ENST00000476664 ZNF777Q9ULD5 760 aaPredicted RBP10.98□□□□□ -0.65
LRCH3-215ENST00000476664 TSPYL2Q9H2G4 693 aaPredicted RBP10.97□□□□□ -0.65
LRCH3-215ENST00000476664 LOC105371045A0A1W2PR82 267 aa10.96□□□□□ -0.65
LRCH3-215ENST00000476664 GPR37O15354 613 aa10.96□□□□□ -0.65
LRCH3-215ENST00000476664 CABP2Q9NPB3 220 aa10.96□□□□□ -0.65
LRCH3-215ENST00000476664 MTMR7Q9Y216 660 aa10.96□□□□□ -0.65
LRCH3-215ENST00000476664 IRF6O14896 467 aa10.95□□□□□ -0.66
LRCH3-215ENST00000476664 MFAP1P55081 439 aaKnown RBP10.95□□□□□ -0.66
LRCH3-215ENST00000476664 ZNF608Q9ULD9 1512 aaPredicted RBP10.94□□□□□ -0.66
LRCH3-215ENST00000476664 HECW2Q9P2P5 1572 aa10.92□□□□□ -0.66
LRCH3-215ENST00000476664 PDE4CQ08493 712 aa10.92□□□□□ -0.66
LRCH3-215ENST00000476664 AKT1S1Q96B36 256 aa10.92□□□□□ -0.66
LRCH3-215ENST00000476664 GZF1Q9H116 711 aaPredicted RBP10.92□□□□□ -0.66
LRCH3-215ENST00000476664 FANCD2Q9BXW9 1451 aa10.92□□□□□ -0.66
LRCH3-215ENST00000476664 URB2Q14146 1524 aaKnown RBP10.91□□□□□ -0.66
LRCH3-215ENST00000476664 TTLL12Q14166 644 aaPredicted RBP10.91□□□□□ -0.66
LRCH3-215ENST00000476664 PDIA6Q15084 440 aa10.91□□□□□ -0.66
LRCH3-215ENST00000476664 PATL2C9JE40 543 aaKnown RBP10.9□□□□□ -0.66
LRCH3-215ENST00000476664 RBM25P49756 843 aaKnown RBP10.9□□□□□ -0.66
LRCH3-215ENST00000476664 FNBP4Q8N3X1 1017 aaPredicted RBP10.9□□□□□ -0.66
LRCH3-215ENST00000476664 RETREG2Q8NC44 543 aa10.9□□□□□ -0.66
LRCH3-215ENST00000476664 PPP1R15BQ5SWA1 713 aa10.88□□□□□ -0.67
LRCH3-215ENST00000476664 PEG3Q9GZU2 1588 aa10.88□□□□□ -0.67
LRCH3-215ENST00000476664 DPYSL4O14531 572 aa10.87□□□□□ -0.67
LRCH3-215ENST00000476664 IGSF3O75054 1194 aa10.87□□□□□ -0.67
LRCH3-215ENST00000476664 HMGB1P09429 215 aaKnown RBP10.87□□□□□ -0.67
LRCH3-215ENST00000476664 SH3D19Q5HYK7 790 aa10.86□□□□□ -0.67
LRCH3-215ENST00000476664 FBXW7Q969H0 707 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms