RNA–Protein interactions for RNA: ENST00000475970.1

TRA2A-205, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-205ENST00000475970 CFAP44Q96MT7 982 aa9.78□□□□□ -0.84
TRA2A-205ENST00000475970 ZNF710Q8N1W2 664 aa9.77□□□□□ -0.85
TRA2A-205ENST00000475970 RIMBP2O15034 1052 aa9.75□□□□□ -0.85
TRA2A-205ENST00000475970 GTPBP6O43824 516 aaPredicted RBP9.75□□□□□ -0.85
TRA2A-205ENST00000475970 DOK7Q18PE1 504 aa9.75□□□□□ -0.85
TRA2A-205ENST00000475970 MICALL2Q8IY33 904 aa9.74□□□□□ -0.85
TRA2A-205ENST00000475970 PHF8Q9UPP1 1060 aa9.74□□□□□ -0.85
TRA2A-205ENST00000475970 NLRP6P59044 892 aa9.73□□□□□ -0.85
TRA2A-205ENST00000475970 MFRPQ9BY79 579 aa9.73□□□□□ -0.85
TRA2A-205ENST00000475970 FAM205CA6NFA0 338 aa9.72□□□□□ -0.85
TRA2A-205ENST00000475970 HS3ST6Q96QI5 342 aa9.7□□□□□ -0.86
TRA2A-205ENST00000475970 RYDENQ9NUL5 291 aaKnown RBP9.7□□□□□ -0.86
TRA2A-205ENST00000475970 HOXB3P14651 431 aaPredicted RBP9.69□□□□□ -0.86
TRA2A-205ENST00000475970 FBXO22Q8NEZ5 403 aa9.69□□□□□ -0.86
TRA2A-205ENST00000475970 MS4A4AQ96JQ5 239 aa9.69□□□□□ -0.86
TRA2A-205ENST00000475970 SLC24A1O60721 1099 aa9.66□□□□□ -0.86
TRA2A-205ENST00000475970 HOXB1P14653 301 aaPredicted RBP9.66□□□□□ -0.86
TRA2A-205ENST00000475970 HAP1P54257 671 aaPredicted RBP9.66□□□□□ -0.86
TRA2A-205ENST00000475970 ERBB3P21860 1342 aa9.64□□□□□ -0.87
TRA2A-205ENST00000475970 SPNS2Q8IVW8 549 aa9.64□□□□□ -0.87
TRA2A-205ENST00000475970 ZSWIM6Q9HCJ5 1215 aa9.63□□□□□ -0.87
TRA2A-205ENST00000475970 PPP1R37O75864 691 aa9.62□□□□□ -0.87
TRA2A-205ENST00000475970 TMEM92Q6UXU6 159 aa9.62□□□□□ -0.87
TRA2A-205ENST00000475970 TSHZ2Q9NRE2 1034 aa9.62□□□□□ -0.87
TRA2A-205ENST00000475970 MMRN1Q13201 1228 aa9.61□□□□□ -0.87
TRA2A-205ENST00000475970 POTEB3A0JP26 581 aa9.58□□□□□ -0.88
TRA2A-205ENST00000475970 POTEBQ6S5H4 581 aa9.58□□□□□ -0.88
TRA2A-205ENST00000475970 KRTAP3-3Q9BYR6 98 aa9.56□□□□□ -0.88
TRA2A-205ENST00000475970 KRTAP3-2Q9BYR7 98 aa9.56□□□□□ -0.88
TRA2A-205ENST00000475970 VARS2Q5ST30 1063 aaKnown RBP9.55□□□□□ -0.88
TRA2A-205ENST00000475970 GPR153Q6NV75 609 aa9.52□□□□□ -0.89
TRA2A-205ENST00000475970 TMC2Q8TDI7 906 aa9.52□□□□□ -0.89
TRA2A-205ENST00000475970 ARSIQ5FYB1 569 aa9.5□□□□□ -0.89
TRA2A-205ENST00000475970 CADPS2Q86UW7 1296 aa9.5□□□□□ -0.89
TRA2A-205ENST00000475970 VSIG10Q8N0Z9 540 aa9.5□□□□□ -0.89
TRA2A-205ENST00000475970 C2orf72A6NCS6 295 aa9.49□□□□□ -0.89
TRA2A-205ENST00000475970 ZNF687Q8N1G0 1237 aa9.48□□□□□ -0.89
TRA2A-205ENST00000475970 KDM2AQ9Y2K7 1162 aa9.48□□□□□ -0.89
TRA2A-205ENST00000475970 KIF3CO14782 793 aa9.46□□□□□ -0.9
TRA2A-205ENST00000475970 ZNF316A6NFI3 1004 aaPredicted RBP9.44□□□□□ -0.9
TRA2A-205ENST00000475970 KHSRPQ92945 711 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRA2A-205ENST00000475970 NCKAP5LQ9HCH0 1330 aa9.4□□□□□ -0.9
TRA2A-205ENST00000475970 SLC34A2O95436 690 aa9.4□□□□□ -0.9
TRA2A-205ENST00000475970 NUDT7P0C024 238 aa9.4□□□□□ -0.9
TRA2A-205ENST00000475970 PDE4AP27815 886 aa9.39□□□□□ -0.91
TRA2A-205ENST00000475970 PTGER2P43116 358 aa9.39□□□□□ -0.91
TRA2A-205ENST00000475970 RNF166Q96A37 237 aaPredicted RBP9.39□□□□□ -0.91
TRA2A-205ENST00000475970 CRISPLD2Q9H0B8 497 aa9.39□□□□□ -0.91
TRA2A-205ENST00000475970 PCDHGA4Q9Y5G9 962 aa9.39□□□□□ -0.91
TRA2A-205ENST00000475970 MYT1LQ9UL68 1186 aa9.38□□□□□ -0.91
TRA2A-205ENST00000475970 ANKRD13DQ6ZTN6 518 aa9.37□□□□□ -0.91
TRA2A-205ENST00000475970 LARP6Q9BRS8 491 aaKnown RBP9.37□□□□□ -0.91
TRA2A-205ENST00000475970 WDR70Q9NW82 654 aa9.37□□□□□ -0.91
TRA2A-205ENST00000475970 GPHNQ9NQX3 736 aaPredicted RBP9.36□□□□□ -0.91
TRA2A-205ENST00000475970 PBX2P40425 430 aa9.35□□□□□ -0.91
TRA2A-205ENST00000475970 PSDA5PKW4 1024 aaPredicted RBP9.34□□□□□ -0.91
TRA2A-205ENST00000475970 LHX6Q9UPM6 363 aa9.34□□□□□ -0.91
TRA2A-205ENST00000475970 LSM11P83369 360 aaKnown RBP eCLIP9.33□□□□□ -0.92
TRA2A-205ENST00000475970 MFSD10Q14728 455 aa9.33□□□□□ -0.92
TRA2A-205ENST00000475970 FOXK1P85037 733 aa9.32□□□□□ -0.92
TRA2A-205ENST00000475970 PLPP6Q8IY26 295 aa9.32□□□□□ -0.92
TRA2A-205ENST00000475970 DDX27Q96GQ7 796 aaKnown RBP9.32□□□□□ -0.92
TRA2A-205ENST00000475970 TBC1D12O60347 775 aa9.31□□□□□ -0.92
TRA2A-205ENST00000475970 DSG2Q14126 1118 aa9.3□□□□□ -0.92
TRA2A-205ENST00000475970 PPP1R15BQ5SWA1 713 aa9.29□□□□□ -0.92
TRA2A-205ENST00000475970 PTCD2Q8WV60 388 aaKnown RBP9.29□□□□□ -0.92
TRA2A-205ENST00000475970 E2F4Q16254 413 aa9.27□□□□□ -0.93
TRA2A-205ENST00000475970 AXIN2Q9Y2T1 843 aa9.25□□□□□ -0.93
TRA2A-205ENST00000475970 ARHGAP33O14559 1287 aa9.24□□□□□ -0.93
TRA2A-205ENST00000475970 PPP4R3BQ5MIZ7 849 aa9.24□□□□□ -0.93
TRA2A-205ENST00000475970 KCNH8Q96L42 1107 aa9.24□□□□□ -0.93
TRA2A-205ENST00000475970 CAMK2BQ13554 666 aa9.23□□□□□ -0.93
TRA2A-205ENST00000475970 P3H3Q8IVL6 736 aa9.23□□□□□ -0.93
TRA2A-205ENST00000475970 KCNV2Q8TDN2 545 aa9.23□□□□□ -0.93
TRA2A-205ENST00000475970 POTEEQ6S8J3 1075 aa9.2□□□□□ -0.94
TRA2A-205ENST00000475970 UPF1Q92900 1129 aaKnown RBP eCLIP9.2□□□□□ -0.94
TRA2A-205ENST00000475970 KDM4FA0A1W2PPD8 638 aa9.19□□□□□ -0.94
TRA2A-205ENST00000475970 ADGRD1Q6QNK2 874 aa9.19□□□□□ -0.94
TRA2A-205ENST00000475970 EMILIN3Q9NT22 766 aa9.19□□□□□ -0.94
TRA2A-205ENST00000475970 STAC3Q96MF2 364 aa9.18□□□□□ -0.94
TRA2A-205ENST00000475970 ARHGEF1Q92888 912 aaKnown RBP9.17□□□□□ -0.94
TRA2A-205ENST00000475970 TK2O00142 265 aa9.16□□□□□ -0.94
TRA2A-205ENST00000475970 OXER1Q8TDS5 423 aa9.16□□□□□ -0.94
TRA2A-205ENST00000475970 ARIH1Q9Y4X5 557 aaPredicted RBP9.16□□□□□ -0.94
TRA2A-205ENST00000475970 PSEN2P49810 448 aa9.15□□□□□ -0.94
TRA2A-205ENST00000475970 DPYSL4O14531 572 aa9.14□□□□□ -0.95
TRA2A-205ENST00000475970 KCNK17Q96T54 332 aa9.14□□□□□ -0.95
TRA2A-205ENST00000475970 NBR1Q14596 966 aa9.13□□□□□ -0.95
TRA2A-205ENST00000475970 ZNF454Q8N9F8 522 aa9.13□□□□□ -0.95
TRA2A-205ENST00000475970 BCANQ96GW7 911 aa9.13□□□□□ -0.95
TRA2A-205ENST00000475970 HCSTQ9UBK5 93 aa9.13□□□□□ -0.95
TRA2A-205ENST00000475970 MAP3K9P80192 1104 aa9.12□□□□□ -0.95
TRA2A-205ENST00000475970 DMRTA1Q5VZB9 504 aa9.12□□□□□ -0.95
TRA2A-205ENST00000475970 SPDYE16A6NNV3 312 aaPredicted RBP9.07□□□□□ -0.96
TRA2A-205ENST00000475970 HRO43593 1189 aa9.07□□□□□ -0.96
TRA2A-205ENST00000475970 EVI5O60447 810 aa9.07□□□□□ -0.96
TRA2A-205ENST00000475970 PTPREP23469 700 aa9.07□□□□□ -0.96
TRA2A-205ENST00000475970 BCL2L12Q9HB09 334 aa9.07□□□□□ -0.96
TRA2A-205ENST00000475970 SEMA3EO15041 775 aa9.06□□□□□ -0.96
TRA2A-205ENST00000475970 KCTD12Q96CX2 325 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms