RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 DEKP35659 375 aaKnown RBP18.16■□□□□ 0.5
CCNL1-216ENST00000475298 KDM5BQ9UGL1 1544 aa18.16■□□□□ 0.5
CCNL1-216ENST00000475298 ZNF644Q9H582 1327 aaPredicted RBP18.16■□□□□ 0.5
CCNL1-216ENST00000475298 FBLN2P98095 1184 aa18.16■□□□□ 0.5
CCNL1-216ENST00000475298 RAPGEF6Q8TEU7 1601 aa18.15■□□□□ 0.5
CCNL1-216ENST00000475298 MYT1LQ9UL68 1186 aa18.15■□□□□ 0.5
CCNL1-216ENST00000475298 CHMP7Q8WUX9 453 aaPredicted RBP18.14■□□□□ 0.49
CCNL1-216ENST00000475298 CEP170Q5SW79 1584 aa18.13■□□□□ 0.49
CCNL1-216ENST00000475298 NEFLP07196 543 aa18.13■□□□□ 0.49
CCNL1-216ENST00000475298 FOXD1Q16676 465 aa18.13■□□□□ 0.49
CCNL1-216ENST00000475298 AKNAQ7Z591 1439 aa18.12■□□□□ 0.49
CCNL1-216ENST00000475298 DAPK1P53355 1430 aa18.1■□□□□ 0.49
CCNL1-216ENST00000475298 MPHOSPH9Q99550 1183 aa18.1■□□□□ 0.49
CCNL1-216ENST00000475298 PLB1Q6P1J6 1458 aa18.1■□□□□ 0.49
CCNL1-216ENST00000475298 MAGI1Q96QZ7 1491 aaPredicted RBP18.1■□□□□ 0.49
CCNL1-216ENST00000475298 PRG4Q92954 1404 aaPredicted RBP18.09■□□□□ 0.49
CCNL1-216ENST00000475298 ABCC5O15440 1437 aa18.08■□□□□ 0.49
CCNL1-216ENST00000475298 SYNJ2O15056 1496 aa18.08■□□□□ 0.48
CCNL1-216ENST00000475298 DNMT1P26358 1616 aaKnown RBP18.07■□□□□ 0.48
CCNL1-216ENST00000475298 CDK11AQ9UQ88 783 aaPredicted RBP18.05■□□□□ 0.48
CCNL1-216ENST00000475298 ANP32CO43423 234 aa18.04■□□□□ 0.48
CCNL1-216ENST00000475298 TROQ12816 1431 aaPredicted RBP18.03■□□□□ 0.48
CCNL1-216ENST00000475298 KIF14Q15058 1648 aa18.02■□□□□ 0.48
CCNL1-216ENST00000475298 JPH4Q96JJ6 628 aa18.02■□□□□ 0.48
CCNL1-216ENST00000475298 ROCK1Q13464 1354 aa18.02■□□□□ 0.48
CCNL1-216ENST00000475298 L3MBTL2Q969R5 705 aa18.01■□□□□ 0.47
CCNL1-216ENST00000475298 ZNF777Q9ULD5 760 aaPredicted RBP18.01■□□□□ 0.47
CCNL1-216ENST00000475298 HSPA5P11021 654 aaKnown RBP18.01■□□□□ 0.47
CCNL1-216ENST00000475298 CFDP1Q9UEE9 299 aaPredicted RBP18■□□□□ 0.47
CCNL1-216ENST00000475298 CAMSAP2Q08AD1 1489 aa18■□□□□ 0.47
CCNL1-216ENST00000475298 SALL2Q9Y467 1007 aaPredicted RBP17.99■□□□□ 0.47
CCNL1-216ENST00000475298 NUP160Q12769 1436 aa17.99■□□□□ 0.47
CCNL1-216ENST00000475298 GPATCH8Q9UKJ3 1502 aaKnown RBP17.98■□□□□ 0.47
CCNL1-216ENST00000475298 CARMIL2Q6F5E8 1435 aa17.97■□□□□ 0.47
CCNL1-216ENST00000475298 CCER2I3L3R5 266 aa17.97■□□□□ 0.47
CCNL1-216ENST00000475298 SLC4A1APQ9BWU0 796 aaKnown RBP17.97■□□□□ 0.47
CCNL1-216ENST00000475298 ANKRD30BQ9BXX2 1392 aa17.97■□□□□ 0.47
CCNL1-216ENST00000475298 WASHC2AQ641Q2 1341 aa17.96■□□□□ 0.47
CCNL1-216ENST00000475298 ITSN2Q9NZM3 1697 aa17.94■□□□□ 0.46
CCNL1-216ENST00000475298 ERICH6BQ5W0A0 696 aa17.94■□□□□ 0.46
CCNL1-216ENST00000475298 ADCY10Q96PN6 1610 aa17.93■□□□□ 0.46
CCNL1-216ENST00000475298 NBPF8Q3BBV2 869 aa17.93■□□□□ 0.46
CCNL1-216ENST00000475298 RPRD2Q5VT52 1461 aaKnown RBP17.92■□□□□ 0.46
CCNL1-216ENST00000475298 EIF4G2P78344 907 aaKnown RBP eCLIP17.92■□□□□ 0.46
CCNL1-216ENST00000475298 NCOA1Q15788 1441 aa17.91■□□□□ 0.46
CCNL1-216ENST00000475298 PZPP20742 1482 aa17.9■□□□□ 0.46
CCNL1-216ENST00000475298 TEX14Q8IWB6 1497 aa17.9■□□□□ 0.46
CCNL1-216ENST00000475298 ADGBQ8N7X0 1667 aa17.89■□□□□ 0.45
CCNL1-216ENST00000475298 C11orf95C9JLR9 678 aaPredicted RBP17.89■□□□□ 0.45
CCNL1-216ENST00000475298 ABCA8O94911 1581 aa17.89■□□□□ 0.45
CCNL1-216ENST00000475298 ATP10BO94823 1461 aa17.88■□□□□ 0.45
CCNL1-216ENST00000475298 CROCC2H7BZ55 1655 aa17.88■□□□□ 0.45
CCNL1-216ENST00000475298 PLEKHD1A6NEE1 506 aa17.88■□□□□ 0.45
CCNL1-216ENST00000475298 CDC42BPAQ5VT25 1732 aa17.87■□□□□ 0.45
CCNL1-216ENST00000475298 ADGRL2O95490 1459 aa17.84■□□□□ 0.45
CCNL1-216ENST00000475298 CCDC136Q96JN2 1154 aa17.84■□□□□ 0.45
CCNL1-216ENST00000475298 ABCC10Q5T3U5 1492 aa17.84■□□□□ 0.45
CCNL1-216ENST00000475298 ANKRD30AQ9BXX3 1397 aa17.83■□□□□ 0.44
CCNL1-216ENST00000475298 PKD2Q13563 968 aa17.81■□□□□ 0.44
CCNL1-216ENST00000475298 NBR1Q14596 966 aa17.81■□□□□ 0.44
CCNL1-216ENST00000475298 CCDC7Q96M83 1385 aa17.81■□□□□ 0.44
CCNL1-216ENST00000475298 CNTLNQ9NXG0 1405 aa17.81■□□□□ 0.44
CCNL1-216ENST00000475298 ANKRD50Q9ULJ7 1429 aa17.81■□□□□ 0.44
CCNL1-216ENST00000475298 IRX6P78412 446 aaPredicted RBP17.8■□□□□ 0.44
CCNL1-216ENST00000475298 UBE2Q2Q8WVN8 375 aa17.8■□□□□ 0.44
CCNL1-216ENST00000475298 NOP58Q9Y2X3 529 aaKnown RBP17.8■□□□□ 0.44
CCNL1-216ENST00000475298 KIAA1107Q9UPP5 1409 aa17.79■□□□□ 0.44
CCNL1-216ENST00000475298 C9orf84Q5VXU9 1444 aa17.79■□□□□ 0.44
CCNL1-216ENST00000475298 PAK3O75914 559 aaPredicted RBP17.79■□□□□ 0.44
CCNL1-216ENST00000475298 CCDC184Q52MB2 194 aa17.79■□□□□ 0.44
CCNL1-216ENST00000475298 ZNF326Q5BKZ1 582 aaKnown RBP17.79■□□□□ 0.44
CCNL1-216ENST00000475298 PTPRGP23470 1445 aa17.78■□□□□ 0.44
CCNL1-216ENST00000475298 HNRNPMP52272 730 aaKnown RBP eCLIP17.78■□□□□ 0.447e-11■■■■□ 25.8
CCNL1-216ENST00000475298 SPATA31E1Q6ZUB1 1445 aa17.77■□□□□ 0.43
CCNL1-216ENST00000475298 HNRNPUQ00839 825 aaKnown RBP eCLIP17.76■□□□□ 0.43
CCNL1-216ENST00000475298 IL27Q8NEV9 243 aa17.76■□□□□ 0.43
CCNL1-216ENST00000475298 KIF7Q2M1P5 1343 aa17.75■□□□□ 0.43
CCNL1-216ENST00000475298 NUP155O75694 1391 aa17.75■□□□□ 0.43
CCNL1-216ENST00000475298 CHD1O14646 1710 aa17.74■□□□□ 0.43
CCNL1-216ENST00000475298 MBD5Q9P267 1494 aa17.74■□□□□ 0.43
CCNL1-216ENST00000475298 SHANK2Q9UPX8 1470 aa17.73■□□□□ 0.43
CCNL1-216ENST00000475298 TSPY4P0CV99 314 aa17.73■□□□□ 0.43
CCNL1-216ENST00000475298 TSPY10P0CW01 314 aa17.73■□□□□ 0.43
CCNL1-216ENST00000475298 PRKRIP1Q9H875 184 aaPredicted RBP17.71■□□□□ 0.43
CCNL1-216ENST00000475298 KIF15Q9NS87 1388 aa17.71■□□□□ 0.43
CCNL1-216ENST00000475298 PPP4R2Q9NY27 417 aa17.69■□□□□ 0.42
CCNL1-216ENST00000475298 CDC42BPBQ9Y5S2 1711 aa17.69■□□□□ 0.42
CCNL1-216ENST00000475298 SAMD9LQ8IVG5 1584 aa17.69■□□□□ 0.42
CCNL1-216ENST00000475298 POLR1AO95602 1720 aaPredicted RBP17.68■□□□□ 0.42
CCNL1-216ENST00000475298 POLR3GLQ9BT43 218 aa17.68■□□□□ 0.42
CCNL1-216ENST00000475298 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.68■□□□□ 0.42
CCNL1-216ENST00000475298 CNGB1Q14028 1251 aaPredicted RBP17.67■□□□□ 0.42
CCNL1-216ENST00000475298 USP47Q96K76 1375 aa17.67■□□□□ 0.42
CCNL1-216ENST00000475298 ERCC6L2Q5T890 1561 aa17.67■□□□□ 0.42
CCNL1-216ENST00000475298 BCORL1Q5H9F3 1711 aa17.67■□□□□ 0.42
CCNL1-216ENST00000475298 RTN4Q9NQC3 1192 aaKnown RBP17.66■□□□□ 0.42
CCNL1-216ENST00000475298 ARHGEF5Q12774 1597 aa17.66■□□□□ 0.42
CCNL1-216ENST00000475298 PREX2Q70Z35 1606 aa17.66■□□□□ 0.42
CCNL1-216ENST00000475298 FAM9BQ8IZU0 186 aa17.66■□□□□ 0.42
CCNL1-216ENST00000475298 MRS2Q9HD23 443 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms