RNA–Protein interactions for RNA: ENST00000475027.5

SH3YL1-220, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 5

Gene SH3YL1, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-220ENST00000475027 PTPRMP28827 1452 aa20.31■□□□□ 0.84
SH3YL1-220ENST00000475027 ZFYVE16Q7Z3T8 1539 aa20.31■□□□□ 0.84
SH3YL1-220ENST00000475027 RIMS1Q86UR5 1692 aaKnown RBP20.29■□□□□ 0.84
SH3YL1-220ENST00000475027 SCAPERQ9BY12 1400 aa20.28■□□□□ 0.84
SH3YL1-220ENST00000475027 PREX2Q70Z35 1606 aa20.28■□□□□ 0.84
SH3YL1-220ENST00000475027 ATP1B4Q9UN42 357 aaPredicted RBP20.27■□□□□ 0.84
SH3YL1-220ENST00000475027 CDC42BPAQ5VT25 1732 aa20.27■□□□□ 0.83
SH3YL1-220ENST00000475027 KDM5CP41229 1560 aa20.26■□□□□ 0.83
SH3YL1-220ENST00000475027 CCDC18Q5T9S5 1454 aa20.25■□□□□ 0.83
SH3YL1-220ENST00000475027 FYCO1Q9BQS8 1478 aa20.25■□□□□ 0.83
SH3YL1-220ENST00000475027 MAGI2Q86UL8 1455 aa20.24■□□□□ 0.83
SH3YL1-220ENST00000475027 CLIP1P30622 1438 aa20.24■□□□□ 0.83
SH3YL1-220ENST00000475027 ITSN2Q9NZM3 1697 aa20.22■□□□□ 0.83
SH3YL1-220ENST00000475027 ARHGAP5Q13017 1502 aa20.22■□□□□ 0.83
SH3YL1-220ENST00000475027 ARHGEF12Q9NZN5 1544 aa20.22■□□□□ 0.83
SH3YL1-220ENST00000475027 ABCC1P33527 1531 aa20.21■□□□□ 0.83
SH3YL1-220ENST00000475027 FER1L4A9Z1Z3 1794 aa20.19■□□□□ 0.82
SH3YL1-220ENST00000475027 DIP2CQ9Y2E4 1556 aa20.19■□□□□ 0.82
SH3YL1-220ENST00000475027 ABCA6Q8N139 1617 aa20.19■□□□□ 0.82
SH3YL1-220ENST00000475027 CDK11AQ9UQ88 783 aaPredicted RBP20.18■□□□□ 0.82
SH3YL1-220ENST00000475027 EFCAB2Q5VUJ9 269 aa20.17■□□□□ 0.82
SH3YL1-220ENST00000475027 ZNF518AQ6AHZ1 1483 aa20.17■□□□□ 0.82
SH3YL1-220ENST00000475027 LMTK3Q96Q04 1460 aa20.16■□□□□ 0.82
SH3YL1-220ENST00000475027 ARID4BQ4LE39 1312 aaPredicted RBP20.15■□□□□ 0.82
SH3YL1-220ENST00000475027 ATP10AO60312 1499 aa20.15■□□□□ 0.82
SH3YL1-220ENST00000475027 SAMD9LQ8IVG5 1584 aa20.15■□□□□ 0.82
SH3YL1-220ENST00000475027 C9orf84Q5VXU9 1444 aa20.14■□□□□ 0.81
SH3YL1-220ENST00000475027 TRAPPC8Q9Y2L5 1435 aa20.14■□□□□ 0.81
SH3YL1-220ENST00000475027 KIDINS220Q9ULH0 1771 aa20.13■□□□□ 0.81
SH3YL1-220ENST00000475027 REREQ9P2R6 1566 aa20.12■□□□□ 0.81
SH3YL1-220ENST00000475027 AFAP1Q8N556 730 aa20.11■□□□□ 0.81
SH3YL1-220ENST00000475027 GPATCH8Q9UKJ3 1502 aaKnown RBP20.1■□□□□ 0.81
SH3YL1-220ENST00000475027 MLH3Q9UHC1 1453 aa20.1■□□□□ 0.81
SH3YL1-220ENST00000475027 CEP162Q5TB80 1403 aa20.07■□□□□ 0.8
SH3YL1-220ENST00000475027 SYCP2Q9BX26 1530 aa20.07■□□□□ 0.8
SH3YL1-220ENST00000475027 TIAM1Q13009 1591 aa20.04■□□□□ 0.8
SH3YL1-220ENST00000475027 MLECQ14165 292 aa20.03■□□□□ 0.8
SH3YL1-220ENST00000475027 AGLP35573 1532 aa20.02■□□□□ 0.8
SH3YL1-220ENST00000475027 ILDR1Q86SU0 546 aaPredicted RBP20.02■□□□□ 0.8
SH3YL1-220ENST00000475027 INO80Q9ULG1 1556 aaPredicted RBP20.02■□□□□ 0.8
SH3YL1-220ENST00000475027 EHBP1L1Q8N3D4 1523 aa20■□□□□ 0.79
SH3YL1-220ENST00000475027 C3P01024 1663 aa20■□□□□ 0.79
SH3YL1-220ENST00000475027 PREX1Q8TCU6 1659 aa19.99■□□□□ 0.79
SH3YL1-220ENST00000475027 PLXNC1O60486 1568 aa19.96■□□□□ 0.79
SH3YL1-220ENST00000475027 ATP7AQ04656 1500 aa19.96■□□□□ 0.79
SH3YL1-220ENST00000475027 HSPA2P54652 639 aa19.95■□□□□ 0.78
SH3YL1-220ENST00000475027 KIAA1107Q9UPP5 1409 aa19.94■□□□□ 0.78
SH3YL1-220ENST00000475027 MTUS2Q5JR59 1369 aa19.94■□□□□ 0.78
SH3YL1-220ENST00000475027 SUPT6HQ7KZ85 1726 aaKnown RBP19.93■□□□□ 0.78
SH3YL1-220ENST00000475027 CEBPAP49715 358 aaPredicted RBP19.93■□□□□ 0.78
SH3YL1-220ENST00000475027 PLPPR3Q6T4P5 718 aa19.93■□□□□ 0.78
SH3YL1-220ENST00000475027 CCNB3Q8WWL7 1395 aa19.92■□□□□ 0.78
SH3YL1-220ENST00000475027 MBD5Q9P267 1494 aa19.92■□□□□ 0.78
SH3YL1-220ENST00000475027 STRCQ7RTU9 1775 aa19.91■□□□□ 0.78
SH3YL1-220ENST00000475027 HNRNPMP52272 730 aaKnown RBP eCLIP19.91■□□□□ 0.786e-7■■□□□ 11.6
SH3YL1-220ENST00000475027 ZNF777Q9ULD5 760 aaPredicted RBP19.91■□□□□ 0.78
SH3YL1-220ENST00000475027 ZNF644Q9H582 1327 aaPredicted RBP19.9■□□□□ 0.78
SH3YL1-220ENST00000475027 PLEKHH2Q8IVE3 1493 aa19.9■□□□□ 0.78
SH3YL1-220ENST00000475027 ADGBQ8N7X0 1667 aa19.89■□□□□ 0.77
SH3YL1-220ENST00000475027 SETD1BQ9UPS6 1966 aaKnown RBP19.89■□□□□ 0.77
SH3YL1-220ENST00000475027 MROH2AA6NES4 1674 aa19.88■□□□□ 0.77
SH3YL1-220ENST00000475027 LOC105371045A0A1W2PR82 267 aa19.88■□□□□ 0.77
SH3YL1-220ENST00000475027 NCOA2Q15596 1464 aa19.87■□□□□ 0.77
SH3YL1-220ENST00000475027 CFDP1Q9UEE9 299 aaPredicted RBP19.86■□□□□ 0.77
SH3YL1-220ENST00000475027 VPS8Q8N3P4 1428 aa19.85■□□□□ 0.77
SH3YL1-220ENST00000475027 SPAG9O60271 1321 aaKnown RBP19.84■□□□□ 0.77
SH3YL1-220ENST00000475027 MYT1LQ9UL68 1186 aa19.84■□□□□ 0.77
SH3YL1-220ENST00000475027 CLTCQ00610 1675 aaKnown RBP19.84■□□□□ 0.77
SH3YL1-220ENST00000475027 A2MP01023 1474 aa19.83■□□□□ 0.76
SH3YL1-220ENST00000475027 CAMSAP2Q08AD1 1489 aa19.82■□□□□ 0.76
SH3YL1-220ENST00000475027 LRRC9Q6ZRR7 1453 aa19.79■□□□□ 0.76
SH3YL1-220ENST00000475027 UHRF1BP1Q6BDS2 1440 aa19.77■□□□□ 0.76
SH3YL1-220ENST00000475027 CNTLNQ9NXG0 1405 aa19.77■□□□□ 0.76
SH3YL1-220ENST00000475027 ARHGEF5Q12774 1597 aa19.77■□□□□ 0.76
SH3YL1-220ENST00000475027 MAP3K1Q13233 1512 aa19.76■□□□□ 0.75
SH3YL1-220ENST00000475027 RTEL1-TNFRSF6BF6WH68 1400 aa19.76■□□□□ 0.75
SH3YL1-220ENST00000475027 CCDC141Q6ZP82 1450 aa19.75■□□□□ 0.75
SH3YL1-220ENST00000475027 ZNF142P52746 1687 aaPredicted RBP19.75■□□□□ 0.75
SH3YL1-220ENST00000475027 MYO3AQ8NEV4 1616 aa19.74■□□□□ 0.75
SH3YL1-220ENST00000475027 NPATQ14207 1427 aa19.72■□□□□ 0.75
SH3YL1-220ENST00000475027 KANK4Q5T7N3 995 aaPredicted RBP19.72■□□□□ 0.75
SH3YL1-220ENST00000475027 FBXO41Q8TF61 875 aa19.72■□□□□ 0.75
SH3YL1-220ENST00000475027 ZMYM3Q14202 1370 aa19.71■□□□□ 0.75
SH3YL1-220ENST00000475027 PTPRKQ15262 1439 aa19.71■□□□□ 0.75
SH3YL1-220ENST00000475027 MAST1Q9Y2H9 1570 aa19.7■□□□□ 0.74
SH3YL1-220ENST00000475027 DHX29Q7Z478 1369 aaKnown RBP19.69■□□□□ 0.74
SH3YL1-220ENST00000475027 NCOA1Q15788 1441 aa19.68■□□□□ 0.74
SH3YL1-220ENST00000475027 CAMSAP1Q5T5Y3 1602 aa19.65■□□□□ 0.74
SH3YL1-220ENST00000475027 CEP170BQ9Y4F5 1589 aaPredicted RBP19.65■□□□□ 0.74
SH3YL1-220ENST00000475027 RNF17Q9BXT8 1623 aaKnown RBP19.65■□□□□ 0.74
SH3YL1-220ENST00000475027 MYOM3Q5VTT5 1437 aa19.64■□□□□ 0.73
SH3YL1-220ENST00000475027 MROH1Q8NDA8 1641 aa19.64■□□□□ 0.73
SH3YL1-220ENST00000475027 CROCC2H7BZ55 1655 aa19.63■□□□□ 0.73
SH3YL1-220ENST00000475027 LTBP4Q8N2S1 1624 aa19.63■□□□□ 0.73
SH3YL1-220ENST00000475027 PTPRTO14522 1441 aa19.63■□□□□ 0.73
SH3YL1-220ENST00000475027 GGT6Q6P531 493 aa19.63■□□□□ 0.73
SH3YL1-220ENST00000475027 ESF1Q9H501 851 aaKnown RBP19.62■□□□□ 0.73
SH3YL1-220ENST00000475027 KDM5DQ9BY66 1539 aa19.61■□□□□ 0.73
SH3YL1-220ENST00000475027 FAM135AQ9P2D6 1515 aa19.61■□□□□ 0.73
SH3YL1-220ENST00000475027 CERKQ8TCT0 537 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms