RNA–Protein interactions for RNA: ENST00000475027.5

SH3YL1-220, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 5

Gene SH3YL1, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-220ENST00000475027 NISCHQ9Y2I1 1504 aa31.16■■■□□ 2.58
SH3YL1-220ENST00000475027 CCDC180Q9P1Z9 1646 aa27.96■■■□□ 2.07
SH3YL1-220ENST00000475027 ABCC9O60706 1549 aa27.72■■■□□ 2.03
SH3YL1-220ENST00000475027 RB1CC1Q8TDY2 1594 aa26.44■■□□□ 1.82
SH3YL1-220ENST00000475027 NACADO15069 1562 aa26.3■■□□□ 1.8
SH3YL1-220ENST00000475027 UNC13AQ9UPW8 1703 aa26.08■■□□□ 1.76
SH3YL1-220ENST00000475027 MYO15BQ96JP2 1530 aa26.02■■□□□ 1.76
SH3YL1-220ENST00000475027 DCAF8L2P0C7V8 631 aa25.95■■□□□ 1.74
SH3YL1-220ENST00000475027 DNAJC5BQ9UF47 199 aa25.94■■□□□ 1.74
SH3YL1-220ENST00000475027 ZCCHC6Q5VYS8 1495 aaKnown RBP25.9■■□□□ 1.74
SH3YL1-220ENST00000475027 BICRAQ9NZM4 1560 aa25.84■■□□□ 1.73
SH3YL1-220ENST00000475027 PABPN1Q86U42 306 aaKnown RBP eCLIP25.76■■□□□ 1.71
SH3YL1-220ENST00000475027 DCAF1Q9Y4B6 1507 aa25.75■■□□□ 1.71
SH3YL1-220ENST00000475027 SCRIBQ14160 1630 aa25.45■■□□□ 1.67
SH3YL1-220ENST00000475027 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
SH3YL1-220ENST00000475027 CC2D2AQ9P2K1 1620 aa25.11■■□□□ 1.61
SH3YL1-220ENST00000475027 EIF4G1Q04637 1599 aaKnown RBP25.09■■□□□ 1.61
SH3YL1-220ENST00000475027 CECR2Q9BXF3 1484 aa24.93■■□□□ 1.58
SH3YL1-220ENST00000475027 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
SH3YL1-220ENST00000475027 NCAPD3P42695 1498 aa24.28■■□□□ 1.48
SH3YL1-220ENST00000475027 ATAD2BQ9ULI0 1458 aa24.25■■□□□ 1.47
SH3YL1-220ENST00000475027 HMGXB3Q12766 1538 aa24.16■■□□□ 1.46
SH3YL1-220ENST00000475027 SMARCA2P51531 1590 aa24.15■■□□□ 1.46
SH3YL1-220ENST00000475027 BAZ1AQ9NRL2 1556 aaPredicted RBP24.13■■□□□ 1.45
SH3YL1-220ENST00000475027 PEG3Q9GZU2 1588 aa24.1■■□□□ 1.45
SH3YL1-220ENST00000475027 MROH2BQ7Z745 1585 aa24.06■■□□□ 1.44
SH3YL1-220ENST00000475027 BAZ1BQ9UIG0 1483 aaKnown RBP23.96■■□□□ 1.43
SH3YL1-220ENST00000475027 NESP48681 1621 aa23.93■■□□□ 1.42
SH3YL1-220ENST00000475027 CUX2O14529 1486 aa23.81■■□□□ 1.4
SH3YL1-220ENST00000475027 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
SH3YL1-220ENST00000475027 WIZO95785 1651 aa23.79■■□□□ 1.4
SH3YL1-220ENST00000475027 THOC2Q8NI27 1593 aaKnown RBP23.72■■□□□ 1.39
SH3YL1-220ENST00000475027 LAMC3Q9Y6N6 1575 aa23.72■■□□□ 1.39
SH3YL1-220ENST00000475027 KIF21AQ7Z4S6 1674 aa23.68■■□□□ 1.38
SH3YL1-220ENST00000475027 DNAJC5Q9H3Z4 198 aa23.58■■□□□ 1.37
SH3YL1-220ENST00000475027 RSF1Q96T23 1441 aaPredicted RBP23.56■■□□□ 1.36
SH3YL1-220ENST00000475027 CADPSQ9ULU8 1353 aa23.5■■□□□ 1.35
SH3YL1-220ENST00000475027 PDS5BQ9NTI5 1447 aa23.46■■□□□ 1.35
SH3YL1-220ENST00000475027 TOP2AP11388 1531 aaKnown RBP23.45■■□□□ 1.34
SH3YL1-220ENST00000475027 MRC2Q9UBG0 1479 aa23.36■■□□□ 1.33
SH3YL1-220ENST00000475027 WDR62O43379 1518 aa23.35■■□□□ 1.33
SH3YL1-220ENST00000475027 CFTRP13569 1480 aa23.32■■□□□ 1.32
SH3YL1-220ENST00000475027 FANCD2Q9BXW9 1451 aa23.26■■□□□ 1.31
SH3YL1-220ENST00000475027 CEP164Q9UPV0 1460 aa23.25■■□□□ 1.31
SH3YL1-220ENST00000475027 PRDM2Q13029 1718 aa23.24■■□□□ 1.31
SH3YL1-220ENST00000475027 URB2Q14146 1524 aaKnown RBP23.16■■□□□ 1.3
SH3YL1-220ENST00000475027 CCDC88BA6NC98 1476 aa23.16■■□□□ 1.3
SH3YL1-220ENST00000475027 TOPBP1Q92547 1522 aa22.88■■□□□ 1.25
SH3YL1-220ENST00000475027 ZNF608Q9ULD9 1512 aaPredicted RBP22.83■■□□□ 1.25
SH3YL1-220ENST00000475027 DNMBPQ6XZF7 1577 aa22.82■■□□□ 1.24
SH3YL1-220ENST00000475027 IFT140Q96RY7 1462 aa22.79■■□□□ 1.24
SH3YL1-220ENST00000475027 TARBP1Q13395 1621 aaKnown RBP22.75■■□□□ 1.23
SH3YL1-220ENST00000475027 EIF4G3O43432 1585 aaKnown RBP22.73■■□□□ 1.23
SH3YL1-220ENST00000475027 ABCC8Q09428 1581 aa22.72■■□□□ 1.23
SH3YL1-220ENST00000475027 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
SH3YL1-220ENST00000475027 OSCARQ8IYS5 282 aa22.6■■□□□ 1.21
SH3YL1-220ENST00000475027 CUX1P39880 1505 aa22.59■■□□□ 1.21
SH3YL1-220ENST00000475027 AEBP2Q6ZN18 517 aaPredicted RBP22.59■■□□□ 1.21
SH3YL1-220ENST00000475027 CHD1O14646 1710 aa22.58■■□□□ 1.21
SH3YL1-220ENST00000475027 AQRO60306 1485 aaKnown RBP eCLIP22.58■■□□□ 1.2
SH3YL1-220ENST00000475027 RAD54L2Q9Y4B4 1467 aa22.58■■□□□ 1.2
SH3YL1-220ENST00000475027 FGD5Q6ZNL6 1462 aa22.54■■□□□ 1.2
SH3YL1-220ENST00000475027 RIMBP3CA6NJZ7 1639 aa22.53■■□□□ 1.2
SH3YL1-220ENST00000475027 RIMBP3BA6NNM3 1639 aa22.53■■□□□ 1.2
SH3YL1-220ENST00000475027 RIMBP3Q9UFD9 1639 aa22.53■■□□□ 1.2
SH3YL1-220ENST00000475027 TRIM41Q8WV44 630 aa22.52■■□□□ 1.2
SH3YL1-220ENST00000475027 WDR97A6NE52 1622 aa22.51■■□□□ 1.19
SH3YL1-220ENST00000475027 SOGA1O94964 1423 aa22.46■■□□□ 1.19
SH3YL1-220ENST00000475027 SUPT5HO00267 1087 aaKnown RBP22.43■■□□□ 1.18
SH3YL1-220ENST00000475027 ARHGEF11O15085 1522 aa22.42■■□□□ 1.18
SH3YL1-220ENST00000475027 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
SH3YL1-220ENST00000475027 SNAPC4Q5SXM2 1469 aa22.37■■□□□ 1.17
SH3YL1-220ENST00000475027 PBRM1Q86U86 1689 aa22.34■■□□□ 1.17
SH3YL1-220ENST00000475027 ABCA5Q8WWZ7 1642 aa22.32■■□□□ 1.16
SH3YL1-220ENST00000475027 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
SH3YL1-220ENST00000475027 BIVM-ERCC5R4GMW8 1640 aa22.29■■□□□ 1.16
SH3YL1-220ENST00000475027 ABCA10Q8WWZ4 1543 aa22.29■■□□□ 1.16
SH3YL1-220ENST00000475027 MAGI1Q96QZ7 1491 aaPredicted RBP22.28■■□□□ 1.16
SH3YL1-220ENST00000475027 SYNJ1O43426 1573 aa22.28■■□□□ 1.16
SH3YL1-220ENST00000475027 GRIN2BQ13224 1484 aa22.28■■□□□ 1.16
SH3YL1-220ENST00000475027 ARAP1Q96P48 1450 aa22.25■■□□□ 1.15
SH3YL1-220ENST00000475027 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
SH3YL1-220ENST00000475027 GAPVD1Q14C86 1478 aa22.22■■□□□ 1.15
SH3YL1-220ENST00000475027 FBLN2P98095 1184 aa22.21■■□□□ 1.15
SH3YL1-220ENST00000475027 SYNJ2O15056 1496 aa22.21■■□□□ 1.15
SH3YL1-220ENST00000475027 WRNQ14191 1432 aaPredicted RBP eCLIP22.15■■□□□ 1.14
SH3YL1-220ENST00000475027 ADAMTS12P58397 1594 aa22.12■■□□□ 1.13
SH3YL1-220ENST00000475027 CYB5RLQ6IPT4 315 aa22.08■■□□□ 1.13
SH3YL1-220ENST00000475027 CHMP7Q8WUX9 453 aaPredicted RBP22.08■■□□□ 1.13
SH3YL1-220ENST00000475027 CEP170Q5SW79 1584 aa22.04■■□□□ 1.12
SH3YL1-220ENST00000475027 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
SH3YL1-220ENST00000475027 ERCC6L2Q5T890 1561 aa22■■□□□ 1.11
SH3YL1-220ENST00000475027 ERICH3Q5RHP9 1530 aa21.99■■□□□ 1.11
SH3YL1-220ENST00000475027 NUP160Q12769 1436 aa21.98■■□□□ 1.11
SH3YL1-220ENST00000475027 SHROOM2Q13796 1616 aa21.95■■□□□ 1.1
SH3YL1-220ENST00000475027 FHAD1B1AJZ9 1412 aa21.93■■□□□ 1.1
SH3YL1-220ENST00000475027 RUSC2Q8N2Y8 1516 aa21.82■■□□□ 1.08
SH3YL1-220ENST00000475027 CUL7Q14999 1698 aa21.72■■□□□ 1.07
SH3YL1-220ENST00000475027 IGF1RP08069 1367 aa21.71■■□□□ 1.07
SH3YL1-220ENST00000475027 TRHP20396 242 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms