RNA–Protein interactions for RNA: ENST00000474932.1

GABRE-206, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 5

Gene GABRE, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-206ENST00000474932 KIF3CO14782 793 aa8.57□□□□□ -1.04
GABRE-206ENST00000474932 EMP3P54852 163 aa8.57□□□□□ -1.04
GABRE-206ENST00000474932 NKX1-1Q15270 411 aaPredicted RBP8.57□□□□□ -1.04
GABRE-206ENST00000474932 MARVELD3Q96A59 401 aa8.57□□□□□ -1.04
GABRE-206ENST00000474932 ZSWIM6Q9HCJ5 1215 aa8.57□□□□□ -1.04
GABRE-206ENST00000474932 AMER1Q5JTC6 1135 aaPredicted RBP8.56□□□□□ -1.04
GABRE-206ENST00000474932 DCAF8L2P0C7V8 631 aa8.55□□□□□ -1.04
GABRE-206ENST00000474932 HOXB1P14653 301 aaPredicted RBP8.55□□□□□ -1.04
GABRE-206ENST00000474932 CDAN1Q8IWY9 1227 aa8.55□□□□□ -1.04
GABRE-206ENST00000474932 C2orf72A6NCS6 295 aa8.54□□□□□ -1.04
GABRE-206ENST00000474932 TMC2Q8TDI7 906 aa8.54□□□□□ -1.04
GABRE-206ENST00000474932 GPR153Q6NV75 609 aa8.5□□□□□ -1.05
GABRE-206ENST00000474932 FAM205CA6NFA0 338 aa8.49□□□□□ -1.05
GABRE-206ENST00000474932 HS3ST6Q96QI5 342 aa8.49□□□□□ -1.05
GABRE-206ENST00000474932 PLSCR2Q9NRY7 297 aa8.49□□□□□ -1.05
GABRE-206ENST00000474932 GTPBP6O43824 516 aaPredicted RBP8.48□□□□□ -1.05
GABRE-206ENST00000474932 SLC34A2O95436 690 aa8.48□□□□□ -1.05
GABRE-206ENST00000474932 GPHNQ9NQX3 736 aaPredicted RBP8.47□□□□□ -1.05
GABRE-206ENST00000474932 FOXK1P85037 733 aa8.46□□□□□ -1.06
GABRE-206ENST00000474932 RTN4Q9NQC3 1192 aaKnown RBP8.45□□□□□ -1.06
GABRE-206ENST00000474932 ERBB3P21860 1342 aa8.45□□□□□ -1.06
GABRE-206ENST00000474932 POTEB3A0JP26 581 aa8.44□□□□□ -1.06
GABRE-206ENST00000474932 ARSIQ5FYB1 569 aa8.44□□□□□ -1.06
GABRE-206ENST00000474932 POTEBQ6S5H4 581 aa8.44□□□□□ -1.06
GABRE-206ENST00000474932 VARS2Q5ST30 1063 aaKnown RBP8.41□□□□□ -1.06
GABRE-206ENST00000474932 BBXQ8WY36 941 aaPredicted RBP8.41□□□□□ -1.06
GABRE-206ENST00000474932 CRISPLD2Q9H0B8 497 aa8.41□□□□□ -1.06
GABRE-206ENST00000474932 DSG2Q14126 1118 aa8.4□□□□□ -1.06
GABRE-206ENST00000474932 PLPP6Q8IY26 295 aa8.4□□□□□ -1.06
GABRE-206ENST00000474932 PCDHGA4Q9Y5G9 962 aa8.4□□□□□ -1.06
GABRE-206ENST00000474932 PTCD2Q8WV60 388 aaKnown RBP8.39□□□□□ -1.07
GABRE-206ENST00000474932 ZNF316A6NFI3 1004 aaPredicted RBP8.38□□□□□ -1.07
GABRE-206ENST00000474932 PDE4AP27815 886 aa8.38□□□□□ -1.07
GABRE-206ENST00000474932 KHSRPQ92945 711 aaKnown RBP eCLIP8.38□□□□□ -1.07
GABRE-206ENST00000474932 KRTAP3-3Q9BYR6 98 aa8.38□□□□□ -1.07
GABRE-206ENST00000474932 KRTAP3-2Q9BYR7 98 aa8.38□□□□□ -1.07
GABRE-206ENST00000474932 ZNF687Q8N1G0 1237 aa8.37□□□□□ -1.07
GABRE-206ENST00000474932 NCKAP5LQ9HCH0 1330 aa8.36□□□□□ -1.07
GABRE-206ENST00000474932 NUDT7P0C024 238 aa8.36□□□□□ -1.07
GABRE-206ENST00000474932 TBC1D12O60347 775 aa8.35□□□□□ -1.07
GABRE-206ENST00000474932 PPP1R15BQ5SWA1 713 aa8.35□□□□□ -1.07
GABRE-206ENST00000474932 SPNS2Q8IVW8 549 aa8.34□□□□□ -1.07
GABRE-206ENST00000474932 KDM4FA0A1W2PPD8 638 aa8.33□□□□□ -1.08
GABRE-206ENST00000474932 PSDA5PKW4 1024 aaPredicted RBP8.33□□□□□ -1.08
GABRE-206ENST00000474932 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.33□□□□□ -1.08
GABRE-206ENST00000474932 DDX27Q96GQ7 796 aaKnown RBP8.32□□□□□ -1.08
GABRE-206ENST00000474932 LHX6Q9UPM6 363 aa8.32□□□□□ -1.08
GABRE-206ENST00000474932 MFSD10Q14728 455 aa8.31□□□□□ -1.08
GABRE-206ENST00000474932 OXER1Q8TDS5 423 aa8.31□□□□□ -1.08
GABRE-206ENST00000474932 LARP6Q9BRS8 491 aaKnown RBP8.31□□□□□ -1.08
GABRE-206ENST00000474932 SPRYD3Q8NCJ5 442 aa8.3□□□□□ -1.08
GABRE-206ENST00000474932 PBX2P40425 430 aa8.29□□□□□ -1.08
GABRE-206ENST00000474932 MMRN1Q13201 1228 aa8.29□□□□□ -1.08
GABRE-206ENST00000474932 CADPS2Q86UW7 1296 aa8.27□□□□□ -1.09
GABRE-206ENST00000474932 UPF1Q92900 1129 aaKnown RBP eCLIP8.26□□□□□ -1.09
GABRE-206ENST00000474932 PTGER2P43116 358 aa8.23□□□□□ -1.09
GABRE-206ENST00000474932 LSM11P83369 360 aaKnown RBP eCLIP8.23□□□□□ -1.091e-6■■■■□ 21.8
GABRE-206ENST00000474932 PPP4R3BQ5MIZ7 849 aa8.23□□□□□ -1.09
GABRE-206ENST00000474932 ARHGAP33O14559 1287 aa8.21□□□□□ -1.1
GABRE-206ENST00000474932 POTEEQ6S8J3 1075 aa8.21□□□□□ -1.1
GABRE-206ENST00000474932 PAXIP1Q6ZW49 1069 aaPredicted RBP8.21□□□□□ -1.1
GABRE-206ENST00000474932 ANO8Q9HCE9 1232 aaPredicted RBP8.21□□□□□ -1.1
GABRE-206ENST00000474932 MAP3K9P80192 1104 aa8.2□□□□□ -1.1
GABRE-206ENST00000474932 CAMK2BQ13554 666 aa8.2□□□□□ -1.1
GABRE-206ENST00000474932 CFAP44Q96MT7 982 aa8.2□□□□□ -1.1
GABRE-206ENST00000474932 EMILIN3Q9NT22 766 aa8.2□□□□□ -1.1
GABRE-206ENST00000474932 EVI5O60447 810 aa8.19□□□□□ -1.1
GABRE-206ENST00000474932 ANKRD13DQ6ZTN6 518 aa8.19□□□□□ -1.1
GABRE-206ENST00000474932 AXIN2Q9Y2T1 843 aa8.18□□□□□ -1.1
GABRE-206ENST00000474932 JPH4Q96JJ6 628 aa8.17□□□□□ -1.1
GABRE-206ENST00000474932 KCNH8Q96L42 1107 aa8.17□□□□□ -1.1
GABRE-206ENST00000474932 MYT1LQ9UL68 1186 aa8.17□□□□□ -1.1
GABRE-206ENST00000474932 FOSBP53539 338 aa8.16□□□□□ -1.1
GABRE-206ENST00000474932 ZNF454Q8N9F8 522 aa8.16□□□□□ -1.1
GABRE-206ENST00000474932 TK2O00142 265 aa8.15□□□□□ -1.1
GABRE-206ENST00000474932 RNF166Q96A37 237 aaPredicted RBP8.15□□□□□ -1.1
GABRE-206ENST00000474932 BCL2L12Q9HB09 334 aa8.15□□□□□ -1.1
GABRE-206ENST00000474932 PSEN2P49810 448 aa8.13□□□□□ -1.11
GABRE-206ENST00000474932 ADGRD1Q6QNK2 874 aa8.13□□□□□ -1.11
GABRE-206ENST00000474932 ZDHHC16Q969W1 377 aa8.12□□□□□ -1.11
GABRE-206ENST00000474932 KCNK17Q96T54 332 aa8.12□□□□□ -1.11
GABRE-206ENST00000474932 DPYSL4O14531 572 aa8.11□□□□□ -1.11
GABRE-206ENST00000474932 DMRTA1Q5VZB9 504 aa8.11□□□□□ -1.11
GABRE-206ENST00000474932 PTPREP23469 700 aa8.1□□□□□ -1.11
GABRE-206ENST00000474932 WDR70Q9NW82 654 aa8.1□□□□□ -1.11
GABRE-206ENST00000474932 PHF14O94880 888 aa8.09□□□□□ -1.11
GABRE-206ENST00000474932 E2F4Q16254 413 aa8.09□□□□□ -1.11
GABRE-206ENST00000474932 SLC4A5Q9BY07 1137 aa8.09□□□□□ -1.11
GABRE-206ENST00000474932 HRO43593 1189 aa8.08□□□□□ -1.12
GABRE-206ENST00000474932 FBXW7Q969H0 707 aa8.08□□□□□ -1.12
GABRE-206ENST00000474932 ARIH1Q9Y4X5 557 aaPredicted RBP8.08□□□□□ -1.12
GABRE-206ENST00000474932 PCDHGA10Q9Y5H3 936 aa8.08□□□□□ -1.12
GABRE-206ENST00000474932 TYW1BQ6NUM6 668 aa8.07□□□□□ -1.12
GABRE-206ENST00000474932 ADAM33Q9BZ11 813 aa8.07□□□□□ -1.12
GABRE-206ENST00000474932 SPDYE16A6NNV3 312 aaPredicted RBP8.06□□□□□ -1.12
GABRE-206ENST00000474932 PDIA6Q15084 440 aa8.06□□□□□ -1.12
GABRE-206ENST00000474932 EPAS1Q99814 870 aa8.06□□□□□ -1.12
GABRE-206ENST00000474932 VPS9D1Q9Y2B5 631 aa8.05□□□□□ -1.12
GABRE-206ENST00000474932 PPP1R3GB7ZBB8 358 aa8.03□□□□□ -1.12
GABRE-206ENST00000474932 STAC3Q96MF2 364 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms