RNA–Protein interactions for RNA: ENST00000474916.1

CDK11A-214, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 752 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-214ENST00000474916 CDC42BPBQ9Y5S2 1711 aa26.76■■□□□ 1.87
CDK11A-214ENST00000474916 CCDC18Q5T9S5 1454 aa26.75■■□□□ 1.87
CDK11A-214ENST00000474916 FYCO1Q9BQS8 1478 aa26.74■■□□□ 1.87
CDK11A-214ENST00000474916 SCAPERQ9BY12 1400 aa26.74■■□□□ 1.87
CDK11A-214ENST00000474916 YEATS2Q9ULM3 1422 aa26.74■■□□□ 1.87
CDK11A-214ENST00000474916 POGZQ7Z3K3 1410 aa26.73■■□□□ 1.87
CDK11A-214ENST00000474916 ARHGAP5Q13017 1502 aa26.71■■□□□ 1.87
CDK11A-214ENST00000474916 ZFYVE16Q7Z3T8 1539 aa26.7■■□□□ 1.87
CDK11A-214ENST00000474916 MADDQ8WXG6 1647 aa26.7■■□□□ 1.86
CDK11A-214ENST00000474916 EFCAB2Q5VUJ9 269 aa26.68■■□□□ 1.86
CDK11A-214ENST00000474916 PREX2Q70Z35 1606 aa26.68■■□□□ 1.86
CDK11A-214ENST00000474916 CDC42BPAQ5VT25 1732 aa26.67■■□□□ 1.86
CDK11A-214ENST00000474916 ARID4BQ4LE39 1312 aaPredicted RBP26.66■■□□□ 1.86
CDK11A-214ENST00000474916 PTPRMP28827 1452 aa26.64■■□□□ 1.86
CDK11A-214ENST00000474916 MAGI2Q86UL8 1455 aa26.62■■□□□ 1.85
CDK11A-214ENST00000474916 RIMS1Q86UR5 1692 aaKnown RBP26.61■■□□□ 1.85
CDK11A-214ENST00000474916 CEP162Q5TB80 1403 aa26.61■■□□□ 1.85
CDK11A-214ENST00000474916 ARHGEF12Q9NZN5 1544 aa26.6■■□□□ 1.85
CDK11A-214ENST00000474916 KDM5CP41229 1560 aa26.58■■□□□ 1.85
CDK11A-214ENST00000474916 ABCC1P33527 1531 aa26.58■■□□□ 1.85
CDK11A-214ENST00000474916 ITSN2Q9NZM3 1697 aa26.57■■□□□ 1.84
CDK11A-214ENST00000474916 AFAP1Q8N556 730 aa26.57■■□□□ 1.84
CDK11A-214ENST00000474916 FBXO41Q8TF61 875 aa26.57■■□□□ 1.84
CDK11A-214ENST00000474916 ZNF518AQ6AHZ1 1483 aa26.55■■□□□ 1.84
CDK11A-214ENST00000474916 TRAPPC8Q9Y2L5 1435 aa26.54■■□□□ 1.84
CDK11A-214ENST00000474916 LOC105371045A0A1W2PR82 267 aa26.53■■□□□ 1.84
CDK11A-214ENST00000474916 ATP10AO60312 1499 aa26.52■■□□□ 1.84
CDK11A-214ENST00000474916 SAMD9LQ8IVG5 1584 aa26.51■■□□□ 1.83
CDK11A-214ENST00000474916 GPATCH8Q9UKJ3 1502 aaKnown RBP26.51■■□□□ 1.83
CDK11A-214ENST00000474916 ABCA6Q8N139 1617 aa26.5■■□□□ 1.83
CDK11A-214ENST00000474916 DIP2CQ9Y2E4 1556 aa26.5■■□□□ 1.83
CDK11A-214ENST00000474916 C9orf84Q5VXU9 1444 aa26.5■■□□□ 1.83
CDK11A-214ENST00000474916 MLECQ14165 292 aa26.5■■□□□ 1.83
CDK11A-214ENST00000474916 FER1L4A9Z1Z3 1794 aa26.5■■□□□ 1.83
CDK11A-214ENST00000474916 KIDINS220Q9ULH0 1771 aa26.46■■□□□ 1.83
CDK11A-214ENST00000474916 SYCP2Q9BX26 1530 aa26.44■■□□□ 1.82
CDK11A-214ENST00000474916 ZNF777Q9ULD5 760 aaPredicted RBP26.44■■□□□ 1.82
CDK11A-214ENST00000474916 MTUS2Q5JR59 1369 aa26.44■■□□□ 1.82
CDK11A-214ENST00000474916 MLH3Q9UHC1 1453 aa26.43■■□□□ 1.82
CDK11A-214ENST00000474916 PLPPR3Q6T4P5 718 aa26.43■■□□□ 1.82
CDK11A-214ENST00000474916 TIAM1Q13009 1591 aa26.41■■□□□ 1.82
CDK11A-214ENST00000474916 EHBP1L1Q8N3D4 1523 aa26.41■■□□□ 1.82
CDK11A-214ENST00000474916 MYT1LQ9UL68 1186 aa26.41■■□□□ 1.82
CDK11A-214ENST00000474916 LMTK3Q96Q04 1460 aa26.41■■□□□ 1.82
CDK11A-214ENST00000474916 REREQ9P2R6 1566 aa26.38■■□□□ 1.81
CDK11A-214ENST00000474916 CCNB3Q8WWL7 1395 aa26.37■■□□□ 1.81
CDK11A-214ENST00000474916 HNRNPMP52272 730 aaKnown RBP eCLIP26.36■■□□□ 1.81
CDK11A-214ENST00000474916 CFDP1Q9UEE9 299 aaPredicted RBP26.34■■□□□ 1.81
CDK11A-214ENST00000474916 ZNF644Q9H582 1327 aaPredicted RBP26.32■■□□□ 1.8
CDK11A-214ENST00000474916 VPS8Q8N3P4 1428 aa26.3■■□□□ 1.8
CDK11A-214ENST00000474916 AGLP35573 1532 aa26.29■■□□□ 1.8
CDK11A-214ENST00000474916 INO80Q9ULG1 1556 aaPredicted RBP26.29■■□□□ 1.8
CDK11A-214ENST00000474916 KIAA1107Q9UPP5 1409 aa26.29■■□□□ 1.8
CDK11A-214ENST00000474916 CEBPAP49715 358 aaPredicted RBP26.28■■□□□ 1.8
CDK11A-214ENST00000474916 SUPT6HQ7KZ85 1726 aaKnown RBP26.28■■□□□ 1.8
CDK11A-214ENST00000474916 ATP7AQ04656 1500 aa26.27■■□□□ 1.8
CDK11A-214ENST00000474916 NCOA2Q15596 1464 aa26.26■■□□□ 1.79
CDK11A-214ENST00000474916 PLEKHH2Q8IVE3 1493 aa26.26■■□□□ 1.79
CDK11A-214ENST00000474916 SPAG9O60271 1321 aaKnown RBP26.25■■□□□ 1.79
CDK11A-214ENST00000474916 HSPA2P54652 639 aa26.25■■□□□ 1.79
CDK11A-214ENST00000474916 C3P01024 1663 aa26.23■■□□□ 1.79
CDK11A-214ENST00000474916 MBD5Q9P267 1494 aa26.23■■□□□ 1.79
CDK11A-214ENST00000474916 PLXNC1O60486 1568 aa26.2■■□□□ 1.78
CDK11A-214ENST00000474916 PREX1Q8TCU6 1659 aa26.19■■□□□ 1.78
CDK11A-214ENST00000474916 LRRC9Q6ZRR7 1453 aa26.19■■□□□ 1.78
CDK11A-214ENST00000474916 CAMSAP2Q08AD1 1489 aa26.17■■□□□ 1.78
CDK11A-214ENST00000474916 KANK4Q5T7N3 995 aaPredicted RBP26.16■■□□□ 1.78
CDK11A-214ENST00000474916 A2MP01023 1474 aa26.15■■□□□ 1.78
CDK11A-214ENST00000474916 ADGBQ8N7X0 1667 aa26.13■■□□□ 1.77
CDK11A-214ENST00000474916 SETD1BQ9UPS6 1966 aaKnown RBP26.11■■□□□ 1.77
CDK11A-214ENST00000474916 CLTCQ00610 1675 aaKnown RBP26.09■■□□□ 1.77
CDK11A-214ENST00000474916 MAP3K1Q13233 1512 aa26.09■■□□□ 1.77
CDK11A-214ENST00000474916 CCDC141Q6ZP82 1450 aa26.08■■□□□ 1.77
CDK11A-214ENST00000474916 MROH2AA6NES4 1674 aa26.07■■□□□ 1.76
CDK11A-214ENST00000474916 ESF1Q9H501 851 aaKnown RBP26.05■■□□□ 1.76
CDK11A-214ENST00000474916 STRCQ7RTU9 1775 aa26.05■■□□□ 1.76
CDK11A-214ENST00000474916 RTEL1-TNFRSF6BF6WH68 1400 aa26.05■■□□□ 1.76
CDK11A-214ENST00000474916 CNTLNQ9NXG0 1405 aa26.04■■□□□ 1.76
CDK11A-214ENST00000474916 ARHGEF5Q12774 1597 aa26.03■■□□□ 1.76
CDK11A-214ENST00000474916 UHRF1BP1Q6BDS2 1440 aa26.03■■□□□ 1.76
CDK11A-214ENST00000474916 GGT6Q6P531 493 aa26.01■■□□□ 1.75
CDK11A-214ENST00000474916 CERKQ8TCT0 537 aa26.01■■□□□ 1.75
CDK11A-214ENST00000474916 ZMYM3Q14202 1370 aa26■■□□□ 1.75
CDK11A-214ENST00000474916 DHX29Q7Z478 1369 aaKnown RBP25.97■■□□□ 1.75
CDK11A-214ENST00000474916 MYOM3Q5VTT5 1437 aa25.97■■□□□ 1.75
CDK11A-214ENST00000474916 ILDR2Q71H61 639 aa25.93■■□□□ 1.74
CDK11A-214ENST00000474916 MAST1Q9Y2H9 1570 aa25.91■■□□□ 1.74
CDK11A-214ENST00000474916 NPATQ14207 1427 aa25.91■■□□□ 1.74
CDK11A-214ENST00000474916 PTPRKQ15262 1439 aa25.91■■□□□ 1.74
CDK11A-214ENST00000474916 MIA2Q96PC5 1412 aa25.91■■□□□ 1.74
CDK11A-214ENST00000474916 RSPH4AQ5TD94 716 aa25.91■■□□□ 1.74
CDK11A-214ENST00000474916 MYO3AQ8NEV4 1616 aa25.9■■□□□ 1.74
CDK11A-214ENST00000474916 KIF3BO15066 747 aa25.89■■□□□ 1.74
CDK11A-214ENST00000474916 DISP3Q9P2K9 1392 aa25.89■■□□□ 1.74
CDK11A-214ENST00000474916 PTPN23Q9H3S7 1636 aa25.87■■□□□ 1.73
CDK11A-214ENST00000474916 TSPY4P0CV99 314 aa25.86■■□□□ 1.73
CDK11A-214ENST00000474916 TSPY10P0CW01 314 aa25.86■■□□□ 1.73
CDK11A-214ENST00000474916 ZNF142P52746 1687 aaPredicted RBP25.85■■□□□ 1.73
CDK11A-214ENST00000474916 CROCC2H7BZ55 1655 aa25.84■■□□□ 1.73
CDK11A-214ENST00000474916 SPATA31D1Q6ZQQ2 1576 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms